Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p08040 Brassica napus
A03p12440 Brassica napus
A10p16140 Brassica napus
Aa31LG3G13850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2396 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1888 Anthoceros agrestis
Actinidia04286 Actinidia chinensis
Actinidia38338 Actinidia chinensis
Ah.09g232410 Amaranthus hybridus
AL8G34130 Arabidopsis lyrata
Aqoxy7G03458 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C8YHGX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2RET6 Arachis hypogaea
AT5G58030 Arabidopsis thaliana
ATR0626G208 Amborella trichopoda
Atru.chr7.129 Acer truncatum
AUR62022430 Chenopodium quinoa
AUR62039306 Chenopodium quinoa
BcaB01g04472 Brassica carinata
BcaB08g36156 Brassica carinata
BolC2t07482H Brassica oleracea
BolC3t13444H Brassica oleracea
BolC3t13904H Brassica oleracea
BraA02t05876Z Brassica rapa
BraA03t10558Z Brassica rapa
C02p13680 Brassica napus
C03p14640 Brassica napus
C09p49950 Brassica napus
CAN.G1263.31 Capsicum annuum
CANSAT11G1798 Cannabis sativa
CARHR271840 Cardamine hirsuta
Carub.0008s1858 Capsella rubella
Ca_03494_v3 Cicer arietinum L.
CBR_g31075 Chara braunii
Cc06_g15230 Coffea canephora
CDE05G0409 Ceratophyllum demersum
CDE05G3286 Ceratophyllum demersum
Cfa020846 Carpinus fangiana
Ciclev10009392m.g Citrus clementina
CiPaw.15G174300 Carya illinoinensis
ClCG06G001160 Citrullus lanatus
Cpa.g.sc46.126 Carica papaya
Cre03.g146467 Chlamydomonas reinhardtii
CsaV3_6G007090 Cucumis sativus L.
CSS0012079 Camellia sinensis var. sinensis
CSS0038411 Camellia sinensis var. sinensis
CSS0046088 Camellia sinensis var. sinensis
DCAR_029638 Daucus carota
Dinv41397 Davidia involucrata
Dinv42882 Davidia involucrata
Dinv43218 Davidia involucrata
Duzib150G0006 Durio zibethinus
Duzib187G1707 Durio zibethinus
ECA246G3736 Erigeron canadensis
EL10Ac4g09955 Beta vulgaris
Eucgr.C00362 Eucalyptus grandis
FAN19G2168 Fragaria x ananassa
FAN23G2865 Fragaria x ananassa
FAN26G2236 Fragaria x ananassa
FAN28G0045 Fragaria x ananassa
FvH4_1g01170 Fragaria vesca
Glyma.11G226500 Glycine max
Glyma.18G030800 Glycine max
Gohir.A05G051600 Gossypium hirsutum
Gohir.A13G184800 Gossypium hirsutum
Gohir.D02G098900 Gossypium hirsutum
Gohir.D05G053100 Gossypium hirsutum
Gohir.D05G367100 Gossypium hirsutum
Gohir.D10G164601 Gossypium hirsutum
Gohir.D13G191200 Gossypium hirsutum
Gorai.007G286700 Gossypium raimondii
Gorai.009G054900 Gossypium raimondii
Gorai.010G087100 Gossypium raimondii
Gorai.010G090900 Gossypium raimondii
Gorai.013G217200 Gossypium raimondii
GSVIVG01023596001 Vitis vinifera
HanXRQChr01g0001761 Helianthus annuus
HanXRQChr15g0473271 Helianthus annuus
Haze_19234 Corylus avellana
Hma1.2p1_0171F.1_g075580 Hydrangea macrophylla
HPP92_023290 Vanilla planifolia
Hund04571 Selenicereus undatus
Lalb_Chr12g0198611 Lupinus albus
Lj6g0023555 Lotus japonicus
Lj6g0023669 Lotus japonicus
Lj7A455G28 Lonicera japonica
Lj7A455T27 Lonicera japonica
Lsat_1_v5_gn_6_106621 Lactuca sativa
Lsat_1_v5_gn_9_77921 Lactuca sativa
Manes.06G037700 Manihot esculenta
Manes.14G111600 Manihot esculenta
Mapoly0012s0171 Marchantia polymorpha
MBI04_g06937_MAGBIO Magnolia biondii
MBI10_g16410_MAGBIO Magnolia biondii
MBI14_g37099_MAGBIO Magnolia biondii
MBI15_g16628_MAGBIO Magnolia biondii
MBI15_g43789_MAGBIO Magnolia biondii
MBI18_g29808_MAGBIO Magnolia biondii
MBI19_g16412_MAGBIO Magnolia biondii
MBI19_g38854_MAGBIO Magnolia biondii
MCO07G641 Micromonas commoda
MD02G1009800 Malus domestica
Medtr3g070070 Medicago truncatula
MELO3C022418.2 Cucumis melo
MELO3C033919.2 Cucumis melo
Migut.K00340 Erythranthe guttata
MSTRG.6119 Avicennia marina
Nitab4.5_0000147g0360 Nicotiana tabacum
Nitab4.5_0006294g0110 Nicotiana tabacum
Nn2g12311 Nelumbo nucifera
Nn8g39815 Nelumbo nucifera
Oeu050476.1 Olea europaea
Os01g0708600 Oryza sativa ssp. japonica
Peaxi162Scf00811g00111 Petunia axillaris
Peaxi162Scf00827g00622 Petunia axillaris
PGR142G2168 Punica granatum
PGSC0003DMG400015006 Solanum tuberosum
Phvul.001G239800 Phaseolus vulgaris
Potri.006G187300 Populus trichocarpa
Potri.018G110000 Populus trichocarpa
Pp3c19_5830 Physcomitrium patens
Pp3c22_3220 Physcomitrium patens
PRCOL_00004142 Prasinoderma coloniale
Prupe.7G260200 Prunus persica
Psat5g127440 Pisum sativum
PSO017G5222 Papaver somniferum
PSO170G2264 Papaver somniferum
QL02p092713 Quercus lobata
RcHm_v2.0_Chr2g0085961 Rosa chinensis
RcHm_v2.0_Chr2g0167881 Rosa chinensis
RcHm_v2.0_Chr2g0167891 Rosa chinensis
Rhsim04G0120400 Rhododendron simsii
Sabra06G0142200 Salix brachista
Sabra06G0143200 Salix brachista
Sabra18G0093000 Salix brachista
SalBow1G0111 Salvia bowleyana
Sc10g0009430 Simmondsia chinensis
Sed0010156 Sechium edule
Sed0010445 Sechium edule
SEGI_30669 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17045 Striga asiatica
SMO356G0367 Selaginella moellendorffii
Solyc04g015050.3 Solanum lycopersicum
Sopen04g007070 Solanum pennellii
Sp6g19710 Schrenkiella parvula
TAR625G1476 Trochodendron aralioides
TAR636G1369 Trochodendron aralioides
THA.LOC104813540 Tarenaya hassleriana
THA.LOC104817825 Tarenaya hassleriana
THA.LOC104817827 Tarenaya hassleriana
Thecc.09G033600 Theobroma cacao
Thhalv10014736m.g Eutrema salsugineum
TPR.G29813 Trifolium pratense
TWI32G0637 Tripterygium wilfordii
TWI34G1141 Tripterygium wilfordii
unitig_0.g919 Utricularia gibba
VMungo1383G0542 Vigna mungo
Zm00001eb271220 Zea mays

User provided reference genes

Program Settings