Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p39200 Brassica napus
Aa31LG3G2320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.493 Anthoceros agrestis
Actinidia04251 Actinidia chinensis
Actinidia21909 Actinidia chinensis
Actinidia38356 Actinidia chinensis
Actinidia38357 Actinidia chinensis
Ah.09g223910 Amaranthus hybridus
AL3G21080 Arabidopsis lyrata
Aqoxy7G03519 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J06XH2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YXSX85 Arachis hypogaea
AT3G09850 Arabidopsis thaliana
ATR0629G131 Amborella trichopoda
Atru.chr7.229_Atru.chr7.228 Acer truncatum
AUR62011249 Chenopodium quinoa
AUR62041455 Chenopodium quinoa
BcaC05g29496 Brassica carinata
BcaC05g29707 Brassica carinata
BolC1t05428H Brassica oleracea
BolC5t34479H Brassica oleracea
BraA05t22709Z Brassica rapa
C05p58250 Brassica napus
CAN.G518.8 Capsicum annuum
CANSAT11G2415 Cannabis sativa
CARHR084360 Cardamine hirsuta
Carub.0003s0894 Capsella rubella
Ca_21611_v3 Cicer arietinum L.
CBR_g21811 Chara braunii
Cc06_g07390 Coffea canephora
CDE05G2637 Ceratophyllum demersum
Cfa020884 Carpinus fangiana
Ciclev10007567m.g Citrus clementina
CiPaw.16G117400 Carya illinoinensis
ClCG06G012070 Citrullus lanatus
COL.COLO4_24085 Corchorus olitorius
COL.COLO4_24086 Corchorus olitorius
Cpa.g.sc46.91 Carica papaya
Cre09.g388986 Chlamydomonas reinhardtii
CsaV3_1G028540 Cucumis sativus L.
CSS0003558 Camellia sinensis var. sinensis
CSS0028433 Camellia sinensis var. sinensis
CSS0049430 Camellia sinensis var. sinensis
DCAR_014931 Daucus carota
DCAR_017762 Daucus carota
Dinv42910 Davidia involucrata
Dinv42911 Davidia involucrata
Dinv43190 Davidia involucrata
Dinv43191 Davidia involucrata
Duzib168G1873 Durio zibethinus
Duzib187G1624 Durio zibethinus
ECA234G1322 Erigeron canadensis
ECA236G2347 Erigeron canadensis
EL10Ac8g18810 Beta vulgaris
Eucgr.C04065 Eucalyptus grandis
Eucgr.C04073 Eucalyptus grandis
Eucgr.C04076 Eucalyptus grandis
Eucgr.L01317 Eucalyptus grandis
Eucgr.L02096 Eucalyptus grandis
Eucgr.L02934 Eucalyptus grandis
Eucgr.L03201 Eucalyptus grandis
Eucgr.L03484 Eucalyptus grandis
FAN19G2203 Fragaria x ananassa
FAN19G2253 Fragaria x ananassa
FAN19G2474 Fragaria x ananassa
FAN23G1466 Fragaria x ananassa
FAN26G2227 Fragaria x ananassa
FAN26G2387 Fragaria x ananassa
FAN28G0742 Fragaria x ananassa
FAN28G2389 Fragaria x ananassa
FvH4_1g01590 Fragaria vesca
FvH4_1g27540 Fragaria vesca
Glyma.13G156900 Glycine max
Glyma.17G104500 Glycine max
Gohir.A06G049000 Gossypium hirsutum
Gohir.D06G048700 Gossypium hirsutum
Gorai.010G054900 Gossypium raimondii
GSVIVG01012900001 Vitis vinifera
HanXRQChr05g0139651 Helianthus annuus
HanXRQChr12g0357011 Helianthus annuus
Haze_19313 Corylus avellana
Hma1.2p1_0182F.1_g080580 Hydrangea macrophylla
Hma1.2p1_0182F.1_g080590 Hydrangea macrophylla
Hma1.2p1_1784F.1_g302190 Hydrangea macrophylla
Hma1.2p1_1784F.1_g302200 Hydrangea macrophylla
Hma1.2p1_2402F.1_g321400 Hydrangea macrophylla
HPP92_005314 Vanilla planifolia
HPP92_005340 Vanilla planifolia
Hund14397 Selenicereus undatus
Lalb_Chr07g0179541 Lupinus albus
Lalb_Chr12g0198521 Lupinus albus
Lj4g0023014 Lotus japonicus
Lj9A709T23 Lonicera japonica
Lsat_1_v5_gn_5_90461 Lactuca sativa
Lsat_1_v5_gn_8_60221 Lactuca sativa
Manes.14G139500 Manihot esculenta
Mapoly0046s0040 Marchantia polymorpha
Mapoly0074s0045 Marchantia polymorpha
MBI14_g15649_MAGBIO Magnolia biondii
MCO07G248 Micromonas commoda
MCO14G075 Micromonas commoda
MD02G1012700 Malus domestica
MD15G1158500 Malus domestica
Medtr4g116570 Medicago truncatula
MELO3C010259.2 Cucumis melo
MELO3C010260.2 Cucumis melo
Migut.J01279 Erythranthe guttata
MSTRG.19628 Avicennia marina
Nitab4.5_0001151g0100 Nicotiana tabacum
Nitab4.5_0001671g0130 Nicotiana tabacum
Nn2g12259 Nelumbo nucifera
Nn8g39728 Nelumbo nucifera
Oeu028749.1 Olea europaea
Oeu040778.1 Olea europaea
Os08g0288500 Oryza sativa ssp. japonica
Peaxi162Scf00347g00125 Petunia axillaris
PGR102G2914 Punica granatum
Phvul.003G175200 Phaseolus vulgaris
Phvul.003G175300 Phaseolus vulgaris
Potri.006G189501 Populus trichocarpa
Potri.018G113600 Populus trichocarpa
Pp3c15_19210 Physcomitrium patens
Pp3c15_19211 Physcomitrium patens
PRCOL_00005204 Prasinoderma coloniale
Prupe.7G253700 Prunus persica
Psat4g033240 Pisum sativum
PSO170G6219 Papaver somniferum
QL02p091406 Quercus lobata
RcHm_v2.0_Chr2g0086551 Rosa chinensis
Sabra06G0145700 Salix brachista
Sabra18G0096500 Salix brachista
Sc18g0000060 Simmondsia chinensis
Sed0008757 Sechium edule
Sed0022583 Sechium edule
SEGI_33529 Sequoiadendron giganteum
SEGI_41623 Sequoiadendron giganteum
SGA_v2.0_scaffold229G43349 Striga asiatica
SHI03239 Sapria himalayana
SHI03242 Sapria himalayana
Solyc07g007040.4 Solanum lycopersicum
Sopen07g003110 Solanum pennellii
Sp3g08180 Schrenkiella parvula
TAR625G0795 Trochodendron aralioides
TAR625G1332 Trochodendron aralioides
THA.LOC104815398 Tarenaya hassleriana
Thecc.09G142400 Theobroma cacao
Thhalv10020109m.g Eutrema salsugineum
TPR.G15786 Trifolium pratense
TWI34G0786 Tripterygium wilfordii
unitig_0.g517 Utricularia gibba
unitig_0.g518 Utricularia gibba
vmacro21880 Vaccinium macrocarpon
VMungo0251G3528 Vigna mungo
VMungo1215G1435 Vigna mungo
VMungo1215G1567 Vigna mungo
VMungo1215G1939 Vigna mungo
VMungo1215G3011 Vigna mungo
Zm00001eb028250 Zea mays

User provided reference genes

Program Settings