Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33910 Brassica napus
A06p42720 Brassica napus
A09p24900 Brassica napus
Aa31LG2G6720 Aethionema arabicum
Actinidia30170 Actinidia chinensis
Actinidia37881 Actinidia chinensis
Ah.04g164810 Amaranthus hybridus
Ah.06g195100 Amaranthus hybridus
Ah.12g062580 Amaranthus hybridus
AL5G14100 Arabidopsis lyrata
Aqoxy3G03818 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35X7C5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3DNXR Arachis hypogaea
AT3G25590 Arabidopsis thaliana
Atru.chr11.1442 Acer truncatum
Atru.chr11.1472 Acer truncatum
AUR62007782 Chenopodium quinoa
AUR62039200 Chenopodium quinoa
BcaB07g30266 Brassica carinata
BcaB07g30637 Brassica carinata
BcaC03g17273 Brassica carinata
BcaC04g21425 Brassica carinata
BcaC04g21427 Brassica carinata
BcaC04g21428 Brassica carinata
BcaC06g31131 Brassica carinata
BcaC06g33977 Brassica carinata
BolC2t11302H Brassica oleracea
BolC7t43969H Brassica oleracea
BolC9t56047H Brassica oleracea
BraA02t08408Z Brassica rapa
BraA06t27185Z Brassica rapa
BraA09t38078Z Brassica rapa
C02p52170 Brassica napus
C07p34410 Brassica napus
C09p31920 Brassica napus
CANSAT64G0418 Cannabis sativa
Carub.0005s0337 Capsella rubella
Ca_05120_v3 Cicer arietinum L.
Cc11_g11080 Coffea canephora
CDE04G2720 Ceratophyllum demersum
CDE04G2972 Ceratophyllum demersum
Cfa008803 Carpinus fangiana
Cfa014422 Carpinus fangiana
Ciclev10033580m.g Citrus clementina
CiPaw.05G118300 Carya illinoinensis
CiPaw.06G097400 Carya illinoinensis
ClCG05G023290 Citrullus lanatus
COL.COLO4_27716 Corchorus olitorius
COL.COLO4_34999 Corchorus olitorius
Cpa.g.sc1.257 Carica papaya
CsaV3_5G033720 Cucumis sativus L.
CSS0002717 Camellia sinensis var. sinensis
CSS0045744 Camellia sinensis var. sinensis
DCAR_026699 Daucus carota
DCAR_030135 Daucus carota
Dinv16554 Davidia involucrata
Duzib168G1705 Durio zibethinus
Duzib251G0342 Durio zibethinus
Duzib268G1242 Durio zibethinus
ECA233G1390 Erigeron canadensis
ECA246G3306 Erigeron canadensis
EL10Ac6g14584 Beta vulgaris
Eucgr.G02393 Eucalyptus grandis
FAN07G0048 Fragaria x ananassa
FAN12G0798 Fragaria x ananassa
FAN17G1809 Fragaria x ananassa
FAN22G1274 Fragaria x ananassa
FvH4_4g28580 Fragaria vesca
Glyma.02G128700 Glycine max
Glyma.04G152800 Glycine max
Gohir.A03G108200 Gossypium hirsutum
Gohir.A12G157850 Gossypium hirsutum
Gohir.A12G157951 Gossypium hirsutum
Gohir.A13G213600 Gossypium hirsutum
Gohir.D02G133400 Gossypium hirsutum
Gohir.D12G160800 Gossypium hirsutum
Gohir.D13G217400 Gossypium hirsutum
Gorai.005G149300 Gossypium raimondii
Gorai.008G173800 Gossypium raimondii
Gorai.013G247900 Gossypium raimondii
GSVIVG01012027001 Vitis vinifera
HanXRQChr08g0214641 Helianthus annuus
HanXRQChr08g0214671 Helianthus annuus
HanXRQChr12g0365221 Helianthus annuus
HanXRQChr17g0551111 Helianthus annuus
HanXRQChr17g0551511 Helianthus annuus
Haze_07821 Corylus avellana
Haze_11818 Corylus avellana
Haze_11819 Corylus avellana
Haze_13037 Corylus avellana
Hma1.2p1_0337F.1_g129430 Hydrangea macrophylla
Hma1.2p1_1424F.1_g282720 Hydrangea macrophylla
Hma1.2p1_1459F.1_g284900 Hydrangea macrophylla
Lalb_Chr10g0099511 Lupinus albus
Lj2g0022626 Lotus japonicus
Lj3P1023T52 Lonicera japonica
Lsat_1_v5_gn_3_58841 Lactuca sativa
Lsat_1_v5_gn_8_37860 Lactuca sativa
Manes.06G076600 Manihot esculenta
Manes.14G094400 Manihot esculenta
MD13G1052200 Malus domestica
MD16G1057700 Malus domestica
Medtr6g472100 Medicago truncatula
MELO3C012188.2 Cucumis melo
Migut.L01125 Erythranthe guttata
Nitab4.5_0001554g0060 Nicotiana tabacum
Nitab4.5_0004681g0010 Nicotiana tabacum
Nitab4.5_0012448g0010 Nicotiana tabacum
Nn3g17622 Nelumbo nucifera
Oeu033529.1 Olea europaea
Peaxi162Scf00188g00418 Petunia axillaris
Peaxi162Scf00208g00131 Petunia axillaris
PGR119G0824 Punica granatum
PGSC0003DMG400002843 Solanum tuberosum
PGSC0003DMG400007516 Solanum tuberosum
Phvul.003G034500 Phaseolus vulgaris
Potri.008G109600 Populus trichocarpa
Potri.010G133600 Populus trichocarpa
Potri.T062072 Populus trichocarpa
Prupe.1G299900 Prunus persica
Psat2g096280 Pisum sativum
PSO063G5818 Papaver somniferum
PSO782G5402 Papaver somniferum
QL03p044380 Quercus lobata
RcHm_v2.0_Chr4g0436671 Rosa chinensis
Rhsim09G0116100 Rhododendron simsii
Rhsim09G0116400 Rhododendron simsii
Sabra08G0083400 Salix brachista
Sabra10G0102200 Salix brachista
SalBow8G3235 Salvia bowleyana
SalBow8G5572 Salvia bowleyana
Sc04g0007050 Simmondsia chinensis
Sed0022479 Sechium edule
SEGI_17788 Sequoiadendron giganteum
SEGI_26556 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07859 Striga asiatica
SGA_v2.0_scaffold36G14507 Striga asiatica
Solyc04g005920.1 Solanum lycopersicum
Solyc05g010450.1 Solanum lycopersicum
Sopen04g001970 Solanum pennellii
Sopen05g006240 Solanum pennellii
Sp2g14860 Schrenkiella parvula
TAR374G1393 Trochodendron aralioides
TAR622G0675 Trochodendron aralioides
THA.LOC104805234 Tarenaya hassleriana
THA.LOC104824044 Tarenaya hassleriana
Thecc.02G315200 Theobroma cacao
Thecc.09G210800 Theobroma cacao
Thhalv10004268m.g Eutrema salsugineum
TPR.G2653 Trifolium pratense
TWI31G1373 Tripterygium wilfordii
TWI75G0122 Tripterygium wilfordii
TWI79G0507 Tripterygium wilfordii
unitig_26.g10277 Utricularia gibba
unitig_699.g19898 Utricularia gibba
unitig_747.g21193 Utricularia gibba
vmacro10495 Vaccinium macrocarpon
VMungo1215G2036 Vigna mungo

User provided reference genes

Program Settings