Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p23920 Brassica napus
A09p50910 Brassica napus
Aa31LG10G12840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3407 Anthoceros agrestis
AL5G39820 Arabidopsis lyrata
Aqoxy6G01699 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3X42ZC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AX2CN5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y05SLV Arachis hypogaea
AT2G27340 Arabidopsis thaliana
AT3G58130 Arabidopsis thaliana
ATR0661G441 Amborella trichopoda
Atru.chr13.142 Acer truncatum
AUR62002652 Chenopodium quinoa
AUR62007426 Chenopodium quinoa
AUR62010959 Chenopodium quinoa
AUR62021469 Chenopodium quinoa
BcaB02g07548 Brassica carinata
BcaC07g40185 Brassica carinata
BcaC07g40276 Brassica carinata
BcaC08g44900 Brassica carinata
BolC6t37673H Brassica oleracea
BolC8t50963H Brassica oleracea
BraA07t30043Z Brassica rapa
BraA09t40537Z Brassica rapa
C06p25150 Brassica napus
C08p33660 Brassica napus
CAN.G1530.1 Capsicum annuum
CAN.G370.25 Capsicum annuum
CARHR168490 Cardamine hirsuta
Carub.0005s2498 Capsella rubella
Carub.0008s0419 Capsella rubella
Carub.0339s0001 Capsella rubella
Cc03_g07430 Coffea canephora
Cc05_g02560 Coffea canephora
CDE04G2633 Ceratophyllum demersum
Ciclev10002226m.g Citrus clementina
CiPaw.15G149700 Carya illinoinensis
CiPaw.16G098200 Carya illinoinensis
COL.COLO4_13996 Corchorus olitorius
Cpa.g.c32558.1 Carica papaya
Cpa.g.sc437.1 Carica papaya
Cre06.g300100 Chlamydomonas reinhardtii
CsaV3_1G002780 Cucumis sativus L.
CSS0005045 Camellia sinensis var. sinensis
CSS0005948 Camellia sinensis var. sinensis
CSS0006634 Camellia sinensis var. sinensis
CSS0036958 Camellia sinensis var. sinensis
CSS0045511 Camellia sinensis var. sinensis
DCAR_002722 Daucus carota
Dinv14864 Davidia involucrata
ECA233G0879 Erigeron canadensis
ECA236G3170 Erigeron canadensis
EL10Ac8g18446 Beta vulgaris
Eucgr.B03172 Eucalyptus grandis
FAN04G2378 Fragaria x ananassa
FAN06G2746 Fragaria x ananassa
FAN06G3856 Fragaria x ananassa
FAN08G3218 Fragaria x ananassa
FAN13G2292 Fragaria x ananassa
FAN18G2677 Fragaria x ananassa
FAN18G3337 Fragaria x ananassa
FvH4_5g18940 Fragaria vesca
FvH4_5g18980 Fragaria vesca
FvH4_7g18930 Fragaria vesca
Glyma.05G126500 Glycine max
Glyma.08G081300 Glycine max
Gohir.A05G386400 Gossypium hirsutum
Gohir.D04G023500 Gossypium hirsutum
Gorai.012G033300 Gossypium raimondii
GSVIVG01028605001 Vitis vinifera
HanXRQChr15g0480201 Helianthus annuus
Haze_18936 Corylus avellana
Hma1.2p1_0018F.1_g012650 Hydrangea macrophylla
HPP92_027560 Vanilla planifolia
Hund02231 Selenicereus undatus
Hund26218 Selenicereus undatus
Hund26251 Selenicereus undatus
Lalb_Chr12g0208781 Lupinus albus
Lj1A1185G61 Lonicera japonica
Lj4g0004659 Lotus japonicus
Lj6g0005186 Lotus japonicus
Lsat_1_v5_gn_7_30581 Lactuca sativa
Manes.08G062966 Manihot esculenta
Mapoly0029s0047 Marchantia polymorpha
MBI08_g32523_MAGBIO Magnolia biondii
MCO09G807 Micromonas commoda
MD06G1059000 Malus domestica
MD16G1270300 Malus domestica
Medtr4g094538 Medicago truncatula
MELO3C017214.2 Cucumis melo
Migut.I00621 Erythranthe guttata
MSTRG.11225 Avicennia marina
MSTRG.22847 Avicennia marina
Nitab4.5_0000422g0080 Nicotiana tabacum
Nitab4.5_0000560g0110 Nicotiana tabacum
Nitab4.5_0013603g0010 Nicotiana tabacum
Nn5g27375 Nelumbo nucifera
Oeu031248.3 Olea europaea
Os04g0678800 Oryza sativa ssp. japonica
Peaxi162Scf00152g00158 Petunia axillaris
Peaxi162Scf00310g00711 Petunia axillaris
PGSC0003DMG400009224 Solanum tuberosum
PGSC0003DMG403029595 Solanum tuberosum
Phvul.002G198500 Phaseolus vulgaris
Potri.012G041700 Populus trichocarpa
Pp3c13_19470 Physcomitrium patens
Pp3s34_410 Physcomitrium patens
PRCOL_00001899 Prasinoderma coloniale
Prupe.5G069900 Prunus persica
Psat1g047920 Pisum sativum
PSO210G6857 Papaver somniferum
PSO761G0502 Papaver somniferum
QL09p040874 Quercus lobata
RcHm_v2.0_Chr7g0203331 Rosa chinensis
RcHm_v2.0_Chr7g0203411 Rosa chinensis
RcHm_v2.0_Chr7g0204201 Rosa chinensis
RcHm_v2.0_Chr7g0204241 Rosa chinensis
Rhsim06G0237000 Rhododendron simsii
Sabra12G0028700 Salix brachista
SalBow1G2796 Salvia bowleyana
SalBow1G4039 Salvia bowleyana
SalBow1G4548 Salvia bowleyana
SalBow1G5331 Salvia bowleyana
SalBow1G5912 Salvia bowleyana
SalBow1G6765 Salvia bowleyana
SalBow1G7315 Salvia bowleyana
SalBow3G1851 Salvia bowleyana
Sc18g0002470 Simmondsia chinensis
Sed0015683 Sechium edule
SEGI_12631 Sequoiadendron giganteum
SEGI_27538 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14646 Striga asiatica
SHI05337 Sapria himalayana
SHI05350 Sapria himalayana
SHI05351 Sapria himalayana
Solyc05g010730.3 Solanum lycopersicum
Solyc08g074360.3 Solanum lycopersicum
Solyc11g017400.2 Solanum lycopersicum
Sopen05g006540 Solanum pennellii
Sopen08g022960 Solanum pennellii
Sopen08g023020 Solanum pennellii
Sopen11g009350 Solanum pennellii
Sp5g04590 Schrenkiella parvula
TAR628G1415 Trochodendron aralioides
THA.LOC104822320 Tarenaya hassleriana
Thecc.01G124300 Theobroma cacao
Thhalv10002036m.g Eutrema salsugineum
Thhalv10002077m.g Eutrema salsugineum
TPR.G30372 Trifolium pratense
TWI15G0666 Tripterygium wilfordii
TWI81G0190 Tripterygium wilfordii
unitig_744.g24647 Utricularia gibba
vmacro18667 Vaccinium macrocarpon
vmacro21453 Vaccinium macrocarpon
VMungo0251G0557 Vigna mungo
Zm00001eb066050 Zea mays
Zm00001eb433850 Zea mays

User provided reference genes

Program Settings