Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p43370 Brassica napus
Aa31LG4G18600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1624 Anthoceros agrestis
Actinidia03789 Actinidia chinensis
Actinidia16495 Actinidia chinensis
Actinidia16496 Actinidia chinensis
Actinidia16497 Actinidia chinensis
AL5G30500 Arabidopsis lyrata
Aqoxy5G01239 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IC24VR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TDMJ0N Arachis hypogaea
AT3G50370 Arabidopsis thaliana
ATR0753G002 Amborella trichopoda
Atru.chr10.1634 Acer truncatum
AUR62001937 Chenopodium quinoa
AUR62003874 Chenopodium quinoa
BcaB01g00621 Brassica carinata
BcaC07g39495 Brassica carinata
BolC8t50162H Brassica oleracea
BraA09t39806Z Brassica rapa
C08p25410 Brassica napus
CAN.G836.79 Capsicum annuum
CANSAT01G1534 Cannabis sativa
CARHR159850 Cardamine hirsuta
Carub.0005s1668 Capsella rubella
Ca_19501_v3 Cicer arietinum L.
Cc07_g19160 Coffea canephora
CDE04G1181 Ceratophyllum demersum
CDE04G1185 Ceratophyllum demersum
CDE08G0981 Ceratophyllum demersum
Cfa004012 Carpinus fangiana
Ciclev10024681m.g Citrus clementina
CiPaw.02G008700 Carya illinoinensis
ClCG01G016790 Citrullus lanatus
COL.COLO4_11405 Corchorus olitorius
Cpa.g.sc55.156 Carica papaya
Cpa.g.sc55.157 Carica papaya
Cpa.g.sc55.158 Carica papaya
CsaV3_6G043220 Cucumis sativus L.
CSS0026663 Camellia sinensis var. sinensis
CSS0033893 Camellia sinensis var. sinensis
DCAR_014074 Daucus carota
Dinv39857 Davidia involucrata
Dinv39858 Davidia involucrata
Duzib147G0064 Durio zibethinus
Duzib187G0053 Durio zibethinus
Duzib264G0542 Durio zibethinus
ECA238G3505 Erigeron canadensis
EL10Ac4g07947 Beta vulgaris
EL10Ac9g22827 Beta vulgaris
Eucgr.I00932 Eucalyptus grandis
FAN04G2449 Fragaria x ananassa
FAN04G2556 Fragaria x ananassa
FAN08G1993 Fragaria x ananassa
FAN18G2522 Fragaria x ananassa
FvH4_5g28170 Fragaria vesca
Glyma.05G096000 Glycine max
Glyma.17G175000 Glycine max
Gohir.A12G070800 Gossypium hirsutum
Gohir.A12G072000 Gossypium hirsutum
Gohir.D12G068700 Gossypium hirsutum
Gohir.D12G068900 Gossypium hirsutum
Gorai.008G075200 Gossypium raimondii
Gorai.008G075400 Gossypium raimondii
GSVIVG01022139001 Vitis vinifera
HanXRQChr14g0442851 Helianthus annuus
HanXRQChr14g0448241 Helianthus annuus
Haze_15408 Corylus avellana
Haze_15410 Corylus avellana
HPP92_004075 Vanilla planifolia
HPP92_004076 Vanilla planifolia
HPP92_004077 Vanilla planifolia
HPP92_004113 Vanilla planifolia
Hund13557 Selenicereus undatus
Lalb_Chr09g0323121 Lupinus albus
Lalb_Chr09g0323141 Lupinus albus
Lalb_Chr16g0378501 Lupinus albus
Lj4g0000036 Lotus japonicus
Lj7A70T81 Lonicera japonica
Lsat_1_v5_gn_2_84180 Lactuca sativa
Manes.12G101200 Manihot esculenta
Manes.12G101400 Manihot esculenta
Mapoly0121s0051 Marchantia polymorpha
MBI02_g02993_MAGBIO Magnolia biondii
MD02G1171200 Malus domestica
MD15G1283100 Malus domestica
MELO3C007558.2 Cucumis melo
Migut.N01430 Erythranthe guttata
MSTRG.23750 Avicennia marina
Nitab4.5_0001034g0140 Nicotiana tabacum
Nitab4.5_0002016g0010 Nicotiana tabacum
Nn1g04868 Nelumbo nucifera
Nn5g30326 Nelumbo nucifera
Oeu003960.1 Olea europaea
Oeu003961.1 Olea europaea
Oeu039071.1 Olea europaea
Os03g0395600 Oryza sativa ssp. japonica
Peaxi162Scf00450g00514 Petunia axillaris
PGR031G0319 Punica granatum
PGSC0003DMG400004537 Solanum tuberosum
Phvul.003G244225 Phaseolus vulgaris
Potri.005G137700 Populus trichocarpa
Potri.007G043300 Populus trichocarpa
Pp3c11_18520 Physcomitrium patens
Pp3c11_18522 Physcomitrium patens
Pp3c7_3230 Physcomitrium patens
Prupe.7G134200 Prunus persica
Psat1g018440 Pisum sativum
Psat2g096520 Pisum sativum
Psat2g096600 Pisum sativum
Psat3g009840 Pisum sativum
Psat4g089080 Pisum sativum
Psat5g208000 Pisum sativum
PSO017G5866 Papaver somniferum
PSO135G0768 Papaver somniferum
PSO170G6095 Papaver somniferum
PSO384G0851 Papaver somniferum
QL06p041719 Quercus lobata
RcHm_v2.0_Chr2g0105361 Rosa chinensis
RcHm_v2.0_Chr2g0105371 Rosa chinensis
RcHm_v2.0_Chr2g0145051 Rosa chinensis
RcHm_v2.0_Chr4g0416641 Rosa chinensis
Rhsim08G0100900 Rhododendron simsii
Sabra05G0109900 Salix brachista
Sabra07G0038200 Salix brachista
Sc03g0001520 Simmondsia chinensis
Sed0014897 Sechium edule
Sed0025145 Sechium edule
Sed0026550 Sechium edule
SEGI_38337 Sequoiadendron giganteum
SHI34242 Sapria himalayana
SHI34246 Sapria himalayana
SMO340G0113 Selaginella moellendorffii
Solyc02g090760.4 Solanum lycopersicum
Sopen02g035390 Solanum pennellii
Sp5g11810 Schrenkiella parvula
TAR376G0591 Trochodendron aralioides
TAR381G0340 Trochodendron aralioides
TAR628G0564 Trochodendron aralioides
TAR628G1123 Trochodendron aralioides
THA.LOC104819234 Tarenaya hassleriana
Thecc.01G055000 Theobroma cacao
Thhalv10010051m.g Eutrema salsugineum
TPR.G10251 Trifolium pratense
TWI09G1111 Tripterygium wilfordii
TWI53G0832 Tripterygium wilfordii
TWI73G0239 Tripterygium wilfordii
unitig_736.g22378 Utricularia gibba
unitig_736.g22379 Utricularia gibba
unitig_736.g22380 Utricularia gibba
unitig_899.g14934 Utricularia gibba
unitig_899.g14935 Utricularia gibba
unitig_899.g14936 Utricularia gibba
unitig_899.g14937 Utricularia gibba
unitig_899.g14938 Utricularia gibba
vmacro17949 Vaccinium macrocarpon
VMungo0251G0843 Vigna mungo
Zm00001eb019260 Zea mays

User provided reference genes

Program Settings