Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03380 Brassica napus
A10p22940 Brassica napus
Aa31LG11G13510 Aethionema arabicum
Actinidia25701 Actinidia chinensis
Actinidia29314 Actinidia chinensis
AL6G26980 Arabidopsis lyrata
Aqoxy7G01097 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.50HX4L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R4HSFZ Arachis hypogaea
AT5G16100 Arabidopsis thaliana
Atru.chr7.1871 Acer truncatum
AUR62009097 Chenopodium quinoa
BcaC03g18467 Brassica carinata
BcaNung02221 Brassica carinata
BolC2t06737H Brassica oleracea
BolC9t58932H Brassica oleracea
BraA02t05309Z Brassica rapa
BraA10t44362Z Brassica rapa
C02p08140 Brassica napus
C09p60890 Brassica napus
CAN.G1245.2 Capsicum annuum
CANSAT21G2041 Cannabis sativa
CARHR197200 Cardamine hirsuta
CARHR197210 Cardamine hirsuta
Carub.0002s0764 Capsella rubella
Carub.0006s1429 Capsella rubella
Carub.0008s1244 Capsella rubella
Carub.0055s0004 Capsella rubella
CBR_g4496 Chara braunii
CBR_g8875 Chara braunii
Cc08_g01350 Coffea canephora
CDE05G1912 Ceratophyllum demersum
Cfa018005 Carpinus fangiana
Ciclev10010497m.g Citrus clementina
CiPaw.09G214400 Carya illinoinensis
CiPaw.15G089600 Carya illinoinensis
CiPaw.15G089700 Carya illinoinensis
CiPaw.15G090500 Carya illinoinensis
CiPaw.15G090600 Carya illinoinensis
ClCG05G018170 Citrullus lanatus
ClCG08G009910 Citrullus lanatus
COL.COLO4_37167 Corchorus olitorius
Cpa.g.sc126.43 Carica papaya
CsaV3_4G035930 Cucumis sativus L.
CsaV3_4G035940 Cucumis sativus L.
CsaV3_6G032010 Cucumis sativus L.
CSS0012791 Camellia sinensis var. sinensis
DCAR_000813 Daucus carota
DCAR_004388 Daucus carota
DCAR_004389 Daucus carota
Dinv06254 Davidia involucrata
Dinv15528 Davidia involucrata
Dinv29489 Davidia involucrata
Duzib106G2021 Durio zibethinus
Duzib264G0965 Durio zibethinus
ECA240G2282 Erigeron canadensis
Eucgr.I00413 Eucalyptus grandis
Eucgr.I02597 Eucalyptus grandis
Eucgr.J00345 Eucalyptus grandis
Eucgr.L01064 Eucalyptus grandis
FAN04G2671 Fragaria x ananassa
FAN06G3367 Fragaria x ananassa
FAN08G0395 Fragaria x ananassa
FAN10G1667 Fragaria x ananassa
FAN13G2684 Fragaria x ananassa
FAN18G0835 Fragaria x ananassa
FvH4_5g32040 Fragaria vesca
FvH4_7g07010 Fragaria vesca
Glyma.04G054800 Glycine max
Glyma.06G054900 Glycine max
Glyma.06G054951 Glycine max
Glyma.06G198300 Glycine max
Glyma.20G016100 Glycine max
Glyma.20G016400 Glycine max
Glyma.20G016500 Glycine max
Gohir.D08G188200 Gossypium hirsutum
Gohir.D08G268633 Gossypium hirsutum
Gohir.D08G268666 Gossypium hirsutum
Gorai.004G198100 Gossypium raimondii
HanXRQChr09g0248091 Helianthus annuus
Haze_18125 Corylus avellana
Haze_18130 Corylus avellana
Hma1.2p1_0231F.1_g097480 Hydrangea macrophylla
HPP92_024782 Vanilla planifolia
Lalb_Chr08g0244871 Lupinus albus
Lalb_Chr19g0132651 Lupinus albus
Lj1g0020695 Lotus japonicus
Lj7A235T21 Lonicera japonica
Lj7P240T29 Lonicera japonica
Lsat_1_v5_gn_7_60080 Lactuca sativa
Manes.03G052300 Manihot esculenta
Mapoly0014s0044 Marchantia polymorpha
Mapoly0049s0118 Marchantia polymorpha
MBI13_g11366_MAGBIO Magnolia biondii
MD08G1069500 Malus domestica
MD15G1052600 Malus domestica
Medtr3g104830 Medicago truncatula
Medtr3g465110 Medicago truncatula
MELO3C011480.2 Cucumis melo
MELO3C016901.2 Cucumis melo
Migut.B01423 Erythranthe guttata
Nitab4.5_0000123g0360 Nicotiana tabacum
Nn5g28590 Nelumbo nucifera
Nn6g35588 Nelumbo nucifera
Oeu005862.1 Olea europaea
Oeu037989.1 Olea europaea
Oeu037990.1 Olea europaea
Os09g0444100 Oryza sativa ssp. japonica
PGSC0003DMG400021751 Solanum tuberosum
Phvul.009G080800 Phaseolus vulgaris
Potri.006G223100 Populus trichocarpa
Pp3c24_6460 Physcomitrium patens
Prupe.1G406500 Prunus persica
Psat5g030600 Pisum sativum
Psat7g051600 Pisum sativum
PSO210G6016 Papaver somniferum
PSO210G7071 Papaver somniferum
PSO388G0001 Papaver somniferum
QL02p000341 Quercus lobata
RcHm_v2.0_Chr7g0228051 Rosa chinensis
Rhsim01G0109000 Rhododendron simsii
Rhsim09G0050500 Rhododendron simsii
Sabra06G0172400 Salix brachista
SalBow4G2609 Salvia bowleyana
SalBow5G2684 Salvia bowleyana
Sc23g0004260 Simmondsia chinensis
Sc23g0004270 Simmondsia chinensis
Sed0013662 Sechium edule
Sed0027657 Sechium edule
SEGI_36367 Sequoiadendron giganteum
SEGI_37362 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09180 Striga asiatica
SGA_v2.0_scaffold98G29377 Striga asiatica
SHI18819 Sapria himalayana
SMO137G0279 Selaginella moellendorffii
SMO145G0176 Selaginella moellendorffii
SMO228G0087 Selaginella moellendorffii
Sopen08g017790 Solanum pennellii
Sp6g28040 Schrenkiella parvula
TAR383G0817 Trochodendron aralioides
THA.LOC104820951 Tarenaya hassleriana
THA.LOC104821164 Tarenaya hassleriana
THA.LOC104827156 Tarenaya hassleriana
Thecc.03G250200 Theobroma cacao
Thecc.05G143900 Theobroma cacao
Thecc.09G060300 Theobroma cacao
Thecc.09G060800 Theobroma cacao
Thhalv10009656m.g Eutrema salsugineum
Thhalv10013525m.g Eutrema salsugineum
TPR.G3531 Trifolium pratense
TWI34G1499 Tripterygium wilfordii
unitig_26.g8849 Utricularia gibba
unitig_750.g28412 Utricularia gibba
unitig_750.g28413 Utricularia gibba
vmacro20759 Vaccinium macrocarpon
VMungo1309G0311 Vigna mungo
VMungo1309G1176 Vigna mungo
Zm00001eb133740 Zea mays

User provided reference genes

Program Settings