Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p31830 Brassica napus
A05p23860 Brassica napus
A08p06280 Brassica napus
Aa31LG6G8640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.584 Anthoceros agrestis
Actinidia29807 Actinidia chinensis
Actinidia29808 Actinidia chinensis
AL1G49880 Arabidopsis lyrata
AL1G52650 Arabidopsis lyrata
Aqoxy5G01553 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LAIT0P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX0J1Q Arachis hypogaea
AT1G35170 Arabidopsis thaliana
AT1G35180 Arabidopsis thaliana
AT1G45010 Arabidopsis thaliana
ATR1154G019 Amborella trichopoda
Atru.chr13.407 Acer truncatum
Atru.chr13.408 Acer truncatum
AUR62014481 Chenopodium quinoa
AUR62034520 Chenopodium quinoa
BcaB03g13672 Brassica carinata
BcaB04g17579 Brassica carinata
BcaC03g17015 Brassica carinata
BcaC05g27748 Brassica carinata
BcaC07g37280 Brassica carinata
BolC2t11011H Brassica oleracea
BolC5t32477H Brassica oleracea
BolC8t47554H Brassica oleracea
BraA02t08192Z Brassica rapa
BraA05t21262Z Brassica rapa
BraA08t32631Z Brassica rapa
C02p49220 Brassica napus
C05p37330 Brassica napus
C08p07100 Brassica napus
CAN.G847.6 Capsicum annuum
CANSAT25G0954 Cannabis sativa
CANSAT25G2211 Cannabis sativa
CARHR036190 Cardamine hirsuta
CARHR263530 Cardamine hirsuta
CARHR288350 Cardamine hirsuta
Carub.0001s3280 Capsella rubella
Carub.0001s3550 Capsella rubella
CBR_g32335 Chara braunii
Cc10_g02450 Coffea canephora
Cc10_g14070 Coffea canephora
Cc11_g05350 Coffea canephora
Cfa013876 Carpinus fangiana
Cfa013877 Carpinus fangiana
Ciclev10002388m.g Citrus clementina
CiPaw.07G156800 Carya illinoinensis
ClCG08G014730 Citrullus lanatus
COL.COLO4_26241 Corchorus olitorius
COL.COLO4_26242 Corchorus olitorius
Cpa.g.sc99.8 Carica papaya
CsaV3_2G029030 Cucumis sativus L.
CSS0029656 Camellia sinensis var. sinensis
DCAR_022455 Daucus carota
Dinv39456 Davidia involucrata
Duzib093G2146 Durio zibethinus
Duzib116G0274 Durio zibethinus
ECA232G1060 Erigeron canadensis
EL10Ac1g00613 Beta vulgaris
Eucgr.F01860 Eucalyptus grandis
FAN15G3036 Fragaria x ananassa
FAN20G2579 Fragaria x ananassa
FAN26G3263 Fragaria x ananassa
FAN27G1022 Fragaria x ananassa
FvH4_2g39310 Fragaria vesca
Glyma.14G071100 Glycine max
Glyma.17G253500 Glycine max
Gohir.A05G190600 Gossypium hirsutum
Gohir.D05G194000 Gossypium hirsutum
Gorai.009G199000 Gossypium raimondii
GSVIVG01009773001 Vitis vinifera
HanXRQChr09g0269541 Helianthus annuus
HanXRQChr09g0269551 Helianthus annuus
HanXRQChr09g0269571 Helianthus annuus
HanXRQChr16g0501461 Helianthus annuus
Haze_22549 Corylus avellana
Haze_22557 Corylus avellana
Hma1.2p1_1194F.1_g265760 Hydrangea macrophylla
Hund17186 Selenicereus undatus
Hund17190 Selenicereus undatus
Hund17243 Selenicereus undatus
Lalb_Chr14g0369521 Lupinus albus
Lalb_Chr14g0369531 Lupinus albus
Lalb_Chr22g0354561 Lupinus albus
Lj4P789T31 Lonicera japonica
Lj5g0004312 Lotus japonicus
Lsat_1_v5_gn_4_117401 Lactuca sativa
Manes.18G021200 Manihot esculenta
Mapoly0020s0017 Marchantia polymorpha
MBI16_g23832_MAGBIO Magnolia biondii
MBI16_g23833_MAGBIO Magnolia biondii
MCO11G540 Micromonas commoda
MD08G1024400 Malus domestica
Medtr1g022950 Medicago truncatula
MELO3C010969.2 Cucumis melo
Migut.C00768 Erythranthe guttata
MSTRG.1250 Avicennia marina
Nitab4.5_0000577g0020 Nicotiana tabacum
Nitab4.5_0001091g0030 Nicotiana tabacum
Nitab4.5_0001861g0030 Nicotiana tabacum
Nitab4.5_0007928g0030 Nicotiana tabacum
Nitab4.5_0007928g0040 Nicotiana tabacum
Nn1g05806 Nelumbo nucifera
Oeu030598.1 Olea europaea
Os01g0262500 Oryza sativa ssp. japonica
Peaxi162Scf00189g00812 Petunia axillaris
PGR031G0233 Punica granatum
PGSC0003DMG400003702 Solanum tuberosum
PGSC0003DMG400015428 Solanum tuberosum
Phvul.001G011500 Phaseolus vulgaris
Potri.005G231600 Populus trichocarpa
Pp3c7_6700 Physcomitrium patens
Prupe.1G374200 Prunus persica
Psat6g009720 Pisum sativum
PSO724G1102 Papaver somniferum
PSO729G0189 Papaver somniferum
QL02p009603 Quercus lobata
QL02p009623 Quercus lobata
QL02p009638 Quercus lobata
QL02p009653 Quercus lobata
QL02p009656 Quercus lobata
RcHm_v2.0_Chr6g0301691 Rosa chinensis
Rhsim07G0242300 Rhododendron simsii
Rhsim07G0242900 Rhododendron simsii
Sabra02G0025300 Salix brachista
SalBow7G0356 Salvia bowleyana
Sc02g0005680 Simmondsia chinensis
Sed0024456 Sechium edule
Sed0025869 Sechium edule
SEGI_11700 Sequoiadendron giganteum
SEGI_31948 Sequoiadendron giganteum
SGA_v2.0_scaffold201G41359 Striga asiatica
SMO259G0011 Selaginella moellendorffii
Solyc04g080750.4 Solanum lycopersicum
Sopen04g034340 Solanum pennellii
Sopen12g031110 Solanum pennellii
Sp1g29900 Schrenkiella parvula
Sp1g33840 Schrenkiella parvula
THA.LOC104812564 Tarenaya hassleriana
THA.LOC104814152 Tarenaya hassleriana
Thecc.08G033500 Theobroma cacao
Thecc.08G033700 Theobroma cacao
Thhalv10001837m.g Eutrema salsugineum
Thhalv10011751m.g Eutrema salsugineum
TPR.G17924 Trifolium pratense
TPR.G29885 Trifolium pratense
TPR.G30491 Trifolium pratense
TWI56G1140 Tripterygium wilfordii
unitig_26.g9839 Utricularia gibba
vmacro04300 Vaccinium macrocarpon
vmacro04301 Vaccinium macrocarpon
vmacro22852 Vaccinium macrocarpon
vmacro22853 Vaccinium macrocarpon
VMungo0647G2091 Vigna mungo
Zm00001eb333330 Zea mays

User provided reference genes

Program Settings