Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p45180 Brassica napus
Aa31sc43G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.569 Anthoceros agrestis
Actinidia08808 Actinidia chinensis
Ah.11g047570 Amaranthus hybridus
AL2G40970 Arabidopsis lyrata
AL6G52910 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.HM0BYB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MTW2QA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NV3HYF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QTZM33 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YS1HQ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z4TQX9 Arachis hypogaea
AT1G80500 Arabidopsis thaliana
ATR0138G017 Amborella trichopoda
Atru.chr2.1838 Acer truncatum
Atru.chr2.1839 Acer truncatum
BcaB07g30930 Brassica carinata
BcaC04g21821 Brassica carinata
BolC6t40416H Brassica oleracea
BolC9t55589H Brassica oleracea
BraA07t32021Z Brassica rapa
BraA09t37732Z Brassica rapa
C06p54030 Brassica napus
C09p27060 Brassica napus
CAN.G395.49 Capsicum annuum
CANSAT56G2605 Cannabis sativa
CARHR074020 Cardamine hirsuta
Carub.0002s0990 Capsella rubella
Carub.0002s1001 Capsella rubella
Carub.0002s2706 Capsella rubella
Ca_17005_v3 Cicer arietinum L.
CBR_g36380 Chara braunii
Cc02_g38630 Coffea canephora
Cc02_g38640 Coffea canephora
CDE01G0639 Ceratophyllum demersum
Ciclev10022803m.g Citrus clementina
CiPaw.03G115100 Carya illinoinensis
CiPaw.04G077100 Carya illinoinensis
ClCG02G000050 Citrullus lanatus
COL.COLO4_28385 Corchorus olitorius
Cpa.g.c40005 Carica papaya
Cre13.g571600 Chlamydomonas reinhardtii
CsaV3_2G019710 Cucumis sativus L.
CsaV3_2G019720 Cucumis sativus L.
CSS0011930 Camellia sinensis var. sinensis
CSS0017610 Camellia sinensis var. sinensis
CSS0029734 Camellia sinensis var. sinensis
CSS0043216 Camellia sinensis var. sinensis
DCAR_025490 Daucus carota
Dinv30578 Davidia involucrata
Duzib151G1169 Durio zibethinus
Duzib212G0633 Durio zibethinus
Duzib268G0645 Durio zibethinus
ECA232G3015 Erigeron canadensis
EL10Ac6g14261 Beta vulgaris
Eucgr.E03470 Eucalyptus grandis
Eucgr.L03064 Eucalyptus grandis
FAN01G0304 Fragaria x ananassa
FAN03G1590 Fragaria x ananassa
FAN06G4122 Fragaria x ananassa
FAN10G0691 Fragaria x ananassa
FvH4_7g07440 Fragaria vesca
Glyma.04G207300 Glycine max
Glyma.06G158300 Glycine max
Gohir.A02G092800 Gossypium hirsutum
Gohir.A09G212650 Gossypium hirsutum
Gohir.D02G111000 Gossypium hirsutum
Gohir.D09G206200 Gossypium hirsutum
Gorai.005G125900 Gossypium raimondii
Gorai.006G230100 Gossypium raimondii
GSVIVG01017278001 Vitis vinifera
HanXRQChr09g0274931 Helianthus annuus
HanXRQChr09g0274941 Helianthus annuus
HanXRQChr16g0500531 Helianthus annuus
Hma1.2p1_0515F.1_g170190 Hydrangea macrophylla
Hma1.2p1_1324F.1_g275710 Hydrangea macrophylla
Hund00544 Selenicereus undatus
Hund06576 Selenicereus undatus
Lalb_Chr08g0237951 Lupinus albus
Lalb_Chr08g0237961 Lupinus albus
Lj1g0023737 Lotus japonicus
Lj1g0025297 Lotus japonicus
Lj5A69T38 Lonicera japonica
Lj9P502T35 Lonicera japonica
Lsat_1_v5_gn_4_105840 Lactuca sativa
Lsat_1_v5_gn_5_132260 Lactuca sativa
Manes.04G101300 Manihot esculenta
Manes.11G068800 Manihot esculenta
Mapoly0010s0129 Marchantia polymorpha
MCO03G231 Micromonas commoda
MD08G1243100 Malus domestica
MD08G1243200 Malus domestica
MD15G1436700 Malus domestica
MD15G1436800 Malus domestica
Medtr1g102650 Medicago truncatula
Medtr3g097015 Medicago truncatula
MELO3C023193.2 Cucumis melo
Migut.D01058 Erythranthe guttata
MSTRG.4713 Avicennia marina
Nitab4.5_0000620g0010 Nicotiana tabacum
Nitab4.5_0005235g0030 Nicotiana tabacum
Oeu052276.1 Olea europaea
Oeu053426.1 Olea europaea
Os02g0613600 Oryza sativa ssp. japonica
Os04g0503800 Oryza sativa ssp. japonica
Peaxi162Scf00207g00743 Petunia axillaris
PGR119G2244 Punica granatum
PGSC0003DMG401028512 Solanum tuberosum
PGSC0003DMG402028512 Solanum tuberosum
Phvul.009G152000 Phaseolus vulgaris
Potri.001G043400 Populus trichocarpa
Potri.003G183400 Populus trichocarpa
Pp3c14_6180 Physcomitrium patens
PRCOL_00001690 Prasinoderma coloniale
Prupe.1G580600 Prunus persica
Psat5g058840 Pisum sativum
PSO170G6065 Papaver somniferum
PSO541G2287 Papaver somniferum
PSO675G8776 Papaver somniferum
QL06p045297 Quercus lobata
QL10p039943 Quercus lobata
QL11p051435 Quercus lobata
RcHm_v2.0_Chr1g0339521 Rosa chinensis
RcHm_v2.0_Chr2g0154941 Rosa chinensis
Rhsim08G0215600 Rhododendron simsii
Rhsim12G0192700 Rhododendron simsii
Rhsim12G0192800 Rhododendron simsii
Sabra01G0029900 Salix brachista
SalBow2G1085 Salvia bowleyana
SalBow3G2596 Salvia bowleyana
Sc10g0005760 Simmondsia chinensis
Sc25g0002650 Simmondsia chinensis
Sed0002995 Sechium edule
Sed0018246 Sechium edule
SEGI_00661 Sequoiadendron giganteum
SGA_v2.0_scaffold117G32370 Striga asiatica
SGA_v2.0_scaffold16G07612 Striga asiatica
SMO244G0023 Selaginella moellendorffii
Solyc06g068030.3 Solanum lycopersicum
Sopen06g025310 Solanum pennellii
Sp2g09550 Schrenkiella parvula
Sp5g35300 Schrenkiella parvula
TAR626G1579 Trochodendron aralioides
THA.LOC104807163 Tarenaya hassleriana
THA.LOC104819505 Tarenaya hassleriana
Thecc.04G171500 Theobroma cacao
Thhalv10001067m.g Eutrema salsugineum
Thhalv10019800m.g Eutrema salsugineum
TPR.G7873 Trifolium pratense
TWI31G0401 Tripterygium wilfordii
TWI75G0475 Tripterygium wilfordii
unitig_899.g14783 Utricularia gibba
vmacro16909 Vaccinium macrocarpon
vmacro21051 Vaccinium macrocarpon
VMungo1309G1053 Vigna mungo
Zm00001eb111730 Zea mays
Zm00001eb331160 Zea mays

User provided reference genes

Program Settings