Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p23970 Brassica napus
A09p50940 Brassica napus
Aa31LG10G12900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1472 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2005 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2479 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3863 Anthoceros agrestis
Actinidia21228 Actinidia chinensis
Actinidia23392 Actinidia chinensis
Ah.02g111810 Amaranthus hybridus
AL5G39880 Arabidopsis lyrata
Aqoxy5G00280 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1I5KFR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.59X69N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6P10V3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9FA7V6 Arachis hypogaea
AT3G58180 Arabidopsis thaliana
AT3G62530 Arabidopsis thaliana
ATR0794G102 Amborella trichopoda
Atru.chr5.1915 Acer truncatum
AUR62011903 Chenopodium quinoa
AUR62024744 Chenopodium quinoa
BcaB02g07544 Brassica carinata
BcaC01g01031 Brassica carinata
BcaC07g40188 Brassica carinata
BcaC07g40268 Brassica carinata
BcaC08g44904 Brassica carinata
BolC3t21049H Brassica oleracea
BolC6t37683H Brassica oleracea
BolC8t50975H Brassica oleracea
BraA07t30048Z Brassica rapa
BraA09t40540Z Brassica rapa
C03p87400 Brassica napus
C06p25240 Brassica napus
C08p33760 Brassica napus
CAN.G159.14 Capsicum annuum
CAN.G572.12 Capsicum annuum
CAN.G795.4 Capsicum annuum
CAN.G907.20 Capsicum annuum
CANSAT21G2336 Cannabis sativa
CARHR168550 Cardamine hirsuta
CARHR168560 Cardamine hirsuta
Carub.0005s2503 Capsella rubella
Ca_02526_v3 Cicer arietinum L.
CBR_g46193 Chara braunii
Cc03_g10870 Coffea canephora
CDE04G0333 Ceratophyllum demersum
CDE04G1470 Ceratophyllum demersum
Cfa002394 Carpinus fangiana
Ciclev10021217m.g Citrus clementina
CiPaw.03G261300 Carya illinoinensis
ClCG09G008080 Citrullus lanatus
COL.COLO4_05596 Corchorus olitorius
COL.COLO4_17118 Corchorus olitorius
Cpa.g.sc50.47 Carica papaya
Cre10.g435550 Chlamydomonas reinhardtii
CsaV3_7G026990 Cucumis sativus L.
DCAR_009311 Daucus carota
DCAR_012530 Daucus carota
Dinv34597 Davidia involucrata
Duzib138G1605 Durio zibethinus
ECA247G2484 Erigeron canadensis
EL10Ac5g10427 Beta vulgaris
Eucgr.K03287 Eucalyptus grandis
FAN15G2654 Fragaria x ananassa
FAN20G1146 Fragaria x ananassa
FAN24G1077 Fragaria x ananassa
FAN27G3448 Fragaria x ananassa
FvH4_2g19410 Fragaria vesca
FvH4_2g22010 Fragaria vesca
Glyma.03G161100 Glycine max
Gohir.A07G211100 Gossypium hirsutum
Gohir.D07G217100 Gossypium hirsutum
Gorai.001G251500 Gossypium raimondii
GSVIVG01028297001 Vitis vinifera
HanXRQChr10g0281111 Helianthus annuus
Haze_24589 Corylus avellana
Haze_24593 Corylus avellana
Haze_27369 Corylus avellana
Hma1.2p1_0273F.1_g109950 Hydrangea macrophylla
HPP92_007745 Vanilla planifolia
HPP92_007825 Vanilla planifolia
Hund09587 Selenicereus undatus
Lalb_Chr20g0107851 Lupinus albus
Lj1A269G34 Lonicera japonica
Lsat_1_v5_gn_9_9101 Lactuca sativa
Manes.05G087500 Manihot esculenta
Mapoly0065s0014 Marchantia polymorpha
MBI17_g17502_MAGBIO Magnolia biondii
MCO15G119 Micromonas commoda
MD05G1201100 Malus domestica
MD10G1187900 Malus domestica
Medtr7g096510 Medicago truncatula
MELO3C012740.2 Cucumis melo
Migut.D00406 Erythranthe guttata
MSTRG.3646 Avicennia marina
Nitab4.5_0000500g0290 Nicotiana tabacum
Nitab4.5_0001839g0070 Nicotiana tabacum
Nitab4.5_0002610g0020 Nicotiana tabacum
Nitab4.5_0002915g0090 Nicotiana tabacum
Nitab4.5_0009451g0050 Nicotiana tabacum
Nn1g02691 Nelumbo nucifera
Nn3g19599 Nelumbo nucifera
Oeu016862.1 Olea europaea
Oeu025823.1 Olea europaea
Oeu041828.1 Olea europaea
Oeu044898.1 Olea europaea
Oeu058648.1 Olea europaea
Os12g0163300 Oryza sativa ssp. japonica
Os12g0626100 Oryza sativa ssp. japonica
Peaxi162Scf00324g00032 Petunia axillaris
PGR044G0761 Punica granatum
PGSC0003DMG400026216 Solanum tuberosum
Phvul.001G159000 Phaseolus vulgaris
Potri.002G041400 Populus trichocarpa
Potri.005G221700 Populus trichocarpa
Pp3c11_17490 Physcomitrium patens
PRCOL_00005471 Prasinoderma coloniale
Prupe.8G227700 Prunus persica
Psat0s2087g0120 Pisum sativum
Psat0s2088g0080 Pisum sativum
Psat0s2295g0120 Pisum sativum
Psat2g052960 Pisum sativum
Psat3g059120 Pisum sativum
PSO541G5588 Papaver somniferum
PSO675G7515 Papaver somniferum
PSO832G2284 Papaver somniferum
QL09p037745 Quercus lobata
RcHm_v2.0_Chr6g0288871 Rosa chinensis
Rhsim01G0266400 Rhododendron simsii
Sabra02G0033000 Salix brachista
SalBow6G2244 Salvia bowleyana
Sc05g0000780 Simmondsia chinensis
Sed0015397 Sechium edule
Sed0016387 Sechium edule
SEGI_01794 Sequoiadendron giganteum
SEGI_33857 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12652 Striga asiatica
SHI26037 Sapria himalayana
SMO304G0012 Selaginella moellendorffii
Solyc08g077830.1 Solanum lycopersicum
Sopen08g026340 Solanum pennellii
Sp5g04540 Schrenkiella parvula
TAR365G0062 Trochodendron aralioides
TAR636G3311 Trochodendron aralioides
THA.LOC104802841 Tarenaya hassleriana
Thecc.01G262600 Theobroma cacao
Thhalv10006107m.g Eutrema salsugineum
TPR.G18834 Trifolium pratense
TPR.G5760 Trifolium pratense
TWI12G0019 Tripterygium wilfordii
TWI18G0975 Tripterygium wilfordii
unitig_8.g3887 Utricularia gibba
vmacro02641 Vaccinium macrocarpon
vmacro03822 Vaccinium macrocarpon
vmacro06125 Vaccinium macrocarpon
VMungo1383G1775 Vigna mungo
Zm00001eb259150 Zea mays

User provided reference genes

Program Settings