Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15870 Brassica napus
A07p35690 Brassica napus
Aa31LG4G11470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2821 Anthoceros agrestis
Actinidia19927 Actinidia chinensis
Actinidia31956 Actinidia chinensis
Actinidia33237 Actinidia chinensis
Ah.02g129300 Amaranthus hybridus
Ah.03g134600 Amaranthus hybridus
AL2G28500 Arabidopsis lyrata
Aqoxy3G03523 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F9ESEJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M1L69X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QAIU0T Arachis hypogaea
AT1G69390 Arabidopsis thaliana
ATR0730G201 Amborella trichopoda
Atru.chr11.1702 Acer truncatum
AUR62005866 Chenopodium quinoa
AUR62032858 Chenopodium quinoa
BcaB03g15467 Brassica carinata
BcaB03g15897 Brassica carinata
BcaB05g24446 Brassica carinata
BcaC03g15079 Brassica carinata
BcaC03g15080 Brassica carinata
BcaC08g45895 Brassica carinata
BolC2t08705H Brassica oleracea
BolC6t38810H Brassica oleracea
BolC6t39378H Brassica oleracea
BraA07t31157Z Brassica rapa
C02p26330 Brassica napus
C06p37000 Brassica napus
C06p40530 Brassica napus
CAN.G1200.3 Capsicum annuum
CANSAT64G2188 Cannabis sativa
CARHR062270 Cardamine hirsuta
Carub.0002s1599 Capsella rubella
Ca_27938_v3 Cicer arietinum L.
Cc11_g12470 Coffea canephora
CDE04G2021 Ceratophyllum demersum
Cfa008917 Carpinus fangiana
Ciclev10032704m.g Citrus clementina
CiPaw.05G128700 Carya illinoinensis
CiPaw.06G089400 Carya illinoinensis
ClCG05G023910 Citrullus lanatus
ClCG09G021950 Citrullus lanatus
COL.COLO4_27949 Corchorus olitorius
Cpa.g.sc1.80 Carica papaya
Cre17.g720350 Chlamydomonas reinhardtii
CsaV3_5G025150 Cucumis sativus L.
CsaV3_5G033110 Cucumis sativus L.
CSS0021997 Camellia sinensis var. sinensis
CSS0045485 Camellia sinensis var. sinensis
DCAR_007179 Daucus carota
DCAR_030983 Daucus carota
Dinv34106 Davidia involucrata
Duzib251G0963 Durio zibethinus
Duzib268G1083 Durio zibethinus
ECA233G5814 Erigeron canadensis
EL10Ac6g13282 Beta vulgaris
Eucgr.B03186 Eucalyptus grandis
FAN05G1708 Fragaria x ananassa
FAN07G0354 Fragaria x ananassa
FAN12G3802 Fragaria x ananassa
FAN14G0263 Fragaria x ananassa
FAN17G0531 Fragaria x ananassa
FAN22G1576 Fragaria x ananassa
FvH4_4g30590 Fragaria vesca
FvH4_6g47773 Fragaria vesca
Glyma.01G054200 Glycine max
Glyma.02G112600 Glycine max
Gohir.A12G162200 Gossypium hirsutum
Gohir.D02G127801 Gossypium hirsutum
Gohir.D12G165500 Gossypium hirsutum
Gorai.005G143600 Gossypium raimondii
Gorai.008G178200 Gossypium raimondii
GSVIVG01001334001 Vitis vinifera
GSVIVG01011473001 Vitis vinifera
HanXRQChr08g0210541 Helianthus annuus
HanXRQChr08g0211031 Helianthus annuus
HanXRQChr12g0362721 Helianthus annuus
HanXRQChr17g0545411 Helianthus annuus
Haze_11945 Corylus avellana
Hma1.2p1_0354F.1_g133690 Hydrangea macrophylla
HPP92_018458 Vanilla planifolia
Hund05856 Selenicereus undatus
Lalb_Chr04g0255821 Lupinus albus
Lalb_Chr17g0340931 Lupinus albus
Lj2g0016497 Lotus japonicus
Lsat_1_v5_gn_8_46800 Lactuca sativa
Manes.05G087100 Manihot esculenta
Manes.05G107100 Manihot esculenta
Mapoly0021s0017 Marchantia polymorpha
MBI19_g03106_MAGBIO Magnolia biondii
MCO05G609 Micromonas commoda
MD09G1057200 Malus domestica
MD16G1066100 Malus domestica
Medtr5g043020 Medicago truncatula
MELO3C002974.2 Cucumis melo
MELO3C012132.2 Cucumis melo
Migut.L01230 Erythranthe guttata
MSTRG.729 Avicennia marina
MSTRG.7770 Avicennia marina
Nitab4.5_0000334g0090 Nicotiana tabacum
Nitab4.5_0011843g0010 Nicotiana tabacum
Nn3g17356 Nelumbo nucifera
Nn4g23307 Nelumbo nucifera
Oeu021093.1 Olea europaea
Os12g0498400 Oryza sativa ssp. japonica
Peaxi162Scf00364g00223 Petunia axillaris
PGR102G3210 Punica granatum
PGSC0003DMG400028333 Solanum tuberosum
Phvul.002G090800 Phaseolus vulgaris
Potri.004G121000 Populus trichocarpa
Potri.008G092300 Populus trichocarpa
Potri.010G162600 Populus trichocarpa
Potri.017G088401 Populus trichocarpa
Pp3c20_5010 Physcomitrium patens
Pp3c23_20800 Physcomitrium patens
Pp3c9_20530 Physcomitrium patens
PRCOL_00005365 Prasinoderma coloniale
Prupe.1G281100 Prunus persica
Prupe.3G261900 Prunus persica
Psat2g127440 Pisum sativum
PSO063G5570 Papaver somniferum
PSO063G6186 Papaver somniferum
PSO478G0019 Papaver somniferum
QL03p070023 Quercus lobata
RcHm_v2.0_Chr2g0166971 Rosa chinensis
RcHm_v2.0_Chr4g0438981 Rosa chinensis
RcHm_v2.0_Chr5g0013451 Rosa chinensis
Rhsim12G0077600 Rhododendron simsii
Sabra04G0067200 Salix brachista
Sabra08G0069100 Salix brachista
Sc04g0007790 Simmondsia chinensis
Sed0010995 Sechium edule
Sed0017620 Sechium edule
SEGI_17925 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07747 Striga asiatica
SGA_v2.0_scaffold36G14423 Striga asiatica
SMO141G0150 Selaginella moellendorffii
SMO356G0701 Selaginella moellendorffii
Solyc05g012710.4 Solanum lycopersicum
Sopen05g007540 Solanum pennellii
Sp5g24440 Schrenkiella parvula
TAR371G1135 Trochodendron aralioides
TAR374G1091 Trochodendron aralioides
TAR629G0577 Trochodendron aralioides
THA.LOC104822027 Tarenaya hassleriana
Thecc.02G337600 Theobroma cacao
Thecc.02G338200 Theobroma cacao
Thhalv10019103m.g Eutrema salsugineum
TPR.G30749 Trifolium pratense
TWI31G0520 Tripterygium wilfordii
TWI79G1514 Tripterygium wilfordii
unitig_21.g20859 Utricularia gibba
vmacro01339 Vaccinium macrocarpon
VMungo1215G2831 Vigna mungo
Zm00001eb409620 Zea mays

User provided reference genes

Program Settings