Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p16180 Brassica napus
A07p16050 Brassica napus
Aa31LG7G10030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5752 Anthoceros agrestis
Actinidia09588 Actinidia chinensis
Actinidia33989 Actinidia chinensis
Ah.09g224580 Amaranthus hybridus
Ah.14g079290 Amaranthus hybridus
Ah.16g106680 Amaranthus hybridus
AL1G32850 Arabidopsis lyrata
Aqoxy1G02233 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L8Q3U6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y6E3CC Arachis hypogaea
AT1G20050 Arabidopsis thaliana
ATR0665G198 Amborella trichopoda
Atru.chr12.1469 Acer truncatum
AUR62011188 Chenopodium quinoa
AUR62013297 Chenopodium quinoa
BcaB03g14342 Brassica carinata
BcaB03g14346 Brassica carinata
BcaB03g14411 Brassica carinata
BcaB03g14416 Brassica carinata
BcaB07g32020 Brassica carinata
BcaC05g25899 Brassica carinata
BcaC05g25903 Brassica carinata
BcaC05g25905 Brassica carinata
BolC5t30565H Brassica oleracea
BolC7t42875H Brassica oleracea
BraA06t24724Z Brassica rapa
BraA07t29333Z Brassica rapa
C05p18540 Brassica napus
C07p23420 Brassica napus
CAN.G874.37 Capsicum annuum
CANSAT80G0994 Cannabis sativa
CARHR020520 Cardamine hirsuta
Carub.0001s1957 Capsella rubella
Ca_25508_v3 Cicer arietinum L.
CBR_g55168 Chara braunii
Cc01_g15960 Coffea canephora
CDE04G3258 Ceratophyllum demersum
Cfa009469 Carpinus fangiana
Cfa019955 Carpinus fangiana
Cfa019956 Carpinus fangiana
Ciclev10002435m.g Citrus clementina
Ciclev10006027m.g Citrus clementina
Ciclev10029254m.g Citrus clementina
Ciclev10029256m.g Citrus clementina
CiPaw.06G111100 Carya illinoinensis
ClCG07G012080 Citrullus lanatus
COL.COLO4_05696 Corchorus olitorius
COL.COLO4_06519 Corchorus olitorius
Cpa.g.sc38.60 Carica papaya
Cre12.g557900 Chlamydomonas reinhardtii
CsaV3_4G002070 Cucumis sativus L.
CSS0003180 Camellia sinensis var. sinensis
CSS0047568 Camellia sinensis var. sinensis
CSS0047688 Camellia sinensis var. sinensis
DCAR_019172 Daucus carota
Duzib187G0077 Durio zibethinus
ECA236G1448 Erigeron canadensis
EL10Ac8g18737 Beta vulgaris
EL10Ac8g18743 Beta vulgaris
EL10Ac8g18744 Beta vulgaris
EL10Ac8g18745 Beta vulgaris
EL10Ac8g18746 Beta vulgaris
EL10Ac8g18747 Beta vulgaris
Eucgr.J01653 Eucalyptus grandis
FAN07G0049 Fragaria x ananassa
FAN12G2246 Fragaria x ananassa
FAN12G3080 Fragaria x ananassa
FAN17G2493 Fragaria x ananassa
FvH4_4g22210 Fragaria vesca
Glyma.09G186700 Glycine max
Glyma.09G186800 Glycine max
Glyma.09G186900 Glycine max
Glyma.13G078900 Glycine max
Gohir.A09G002500 Gossypium hirsutum
Gohir.D09G002300 Gossypium hirsutum
Gorai.006G002800 Gossypium raimondii
GSVIVG01025270001 Vitis vinifera
HanXRQChr04g0124971 Helianthus annuus
Haze_12526 Corylus avellana
Hma1.2p1_0738F.1_g210920 Hydrangea macrophylla
HPP92_007022 Vanilla planifolia
HPP92_007039 Vanilla planifolia
Hund18283 Selenicereus undatus
Hund23298 Selenicereus undatus
Lalb_Chr14g0371281 Lupinus albus
Lj1A1122T48 Lonicera japonica
Lj2g0001774 Lotus japonicus
Lsat_1_v5_gn_5_6480 Lactuca sativa
Lsat_1_v5_gn_8_83161 Lactuca sativa
Manes.12G130500 Manihot esculenta
Mapoly0026s0030 Marchantia polymorpha
Mapoly0072s0066 Marchantia polymorpha
MBI07_g42009_MAGBIO Magnolia biondii
MD13G1133800 Malus domestica
MD16G1144400 Malus domestica
Medtr6g084920 Medicago truncatula
MELO3C017829.2 Cucumis melo
MELO3C030902.2 Cucumis melo
Migut.N00675 Erythranthe guttata
MSTRG.17963 Avicennia marina
Nitab4.5_0000038g0240 Nicotiana tabacum
Nitab4.5_0001348g0030 Nicotiana tabacum
Nitab4.5_0007144g0020 Nicotiana tabacum
Nn3g16208 Nelumbo nucifera
Nn4g22076 Nelumbo nucifera
Oeu018311.3 Olea europaea
Oeu018323.1 Olea europaea
Oeu051508.1 Olea europaea
Oeu058204.1 Olea europaea
Oeu058206.1 Olea europaea
Os01g0103600 Oryza sativa ssp. japonica
Peaxi162Scf00235g00217 Petunia axillaris
Peaxi162Scf01242g00029 Petunia axillaris
PGR119G0727 Punica granatum
PGR119G2305 Punica granatum
PGSC0003DMG400027684 Solanum tuberosum
Phvul.004G160000 Phaseolus vulgaris
Potri.001G070301 Populus trichocarpa
Potri.003G160500 Populus trichocarpa
Pp3c9_19720 Physcomitrium patens
Prupe.1G211800 Prunus persica
Psat1g039080 Pisum sativum
Psat5g295440 Pisum sativum
PSO541G3463 Papaver somniferum
PSO675G5153 Papaver somniferum
QL03p048368 Quercus lobata
RcHm_v2.0_Chr4g0428441 Rosa chinensis
Rhsim12G0068000 Rhododendron simsii
Sabra01G0049300 Salix brachista
Sabra03G0116700 Salix brachista
SalBow3G2027 Salvia bowleyana
Sc17g0004750 Simmondsia chinensis
Sed0003942 Sechium edule
SEGI_00448 Sequoiadendron giganteum
SEGI_03556 Sequoiadendron giganteum
SGA_v2.0_scaffold77G25307 Striga asiatica
SGA_v2.0_scaffold95G28703 Striga asiatica
SMO119G0501 Selaginella moellendorffii
SMO196G0274 Selaginella moellendorffii
Solyc06g082980.3 Solanum lycopersicum
Sopen06g034370 Solanum pennellii
Sp1g17810 Schrenkiella parvula
TAR374G1650 Trochodendron aralioides
THA.LOC104807222 Tarenaya hassleriana
Thecc.01G240000 Theobroma cacao
Thhalv10008732m.g Eutrema salsugineum
TPR.G21858 Trifolium pratense
TPR.G38962 Trifolium pratense
TPR.G38981 Trifolium pratense
TWI18G0021 Tripterygium wilfordii
unitig_0.g417 Utricularia gibba
vmacro04885 Vaccinium macrocarpon
vmacro15975 Vaccinium macrocarpon
VMungo0464G1792 Vigna mungo
Zm00001eb126960 Zea mays
Zm00001eb334120 Zea mays

User provided reference genes

Program Settings