Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12350 Brassica napus
A10p09160 Brassica napus
A10p09220 Brassica napus
A10p09300 Brassica napus
A10p09340 Brassica napus
Aa31sc202G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis
Actinidia01052 Actinidia chinensis
Actinidia24695 Actinidia chinensis
Actinidia31780 Actinidia chinensis
Ah.10g036230 Amaranthus hybridus
AL8G25720 Arabidopsis lyrata
Aqoxy2G03231 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea
AT5G51430 Arabidopsis thaliana
ATR0317G078 Amborella trichopoda
Atru.chr1.728 Acer truncatum
AUR62012299 Chenopodium quinoa
AUR62022938 Chenopodium quinoa
BcaB08g35501 Brassica carinata
BcaC03g14608 Brassica carinata
BcaC04g20676 Brassica carinata
BolC2t08183H Brassica oleracea
BolC9t56951H Brassica oleracea
BraA02t06300Z Brassica rapa
BraA10t42999Z Brassica rapa
BraA10t43002Z Brassica rapa
BraA10t43007Z Brassica rapa
BraA10t43010Z Brassica rapa
C02p20480 Brassica napus
C09p40720 Brassica napus
CAN.G118.7 Capsicum annuum
CAN.G16.15 Capsicum annuum
CAN.G280.11 Capsicum annuum
CAN.G689.5 Capsicum annuum
CAN.G689.6 Capsicum annuum
CAN.G74.49 Capsicum annuum
CAN.G903.1 Capsicum annuum
CANSAT56G3837 Cannabis sativa
CARHR150020 Cardamine hirsuta
CARHR264160 Cardamine hirsuta
Carub.0008s1145 Capsella rubella
Ca_19628_v3 Cicer arietinum L.
CBR_g31542 Chara braunii
Cc02_g04280 Coffea canephora
CDE04G0004 Ceratophyllum demersum
CDE04G0650 Ceratophyllum demersum
CDE04G2539 Ceratophyllum demersum
Cfa008167 Carpinus fangiana
Ciclev10004313m.g Citrus clementina
CiPaw.03G093300 Carya illinoinensis
ClCG05G007360 Citrullus lanatus
COL.COLO4_14121 Corchorus olitorius
COL.COLO4_14122 Corchorus olitorius
Cpa.g.sc3.324 Carica papaya
Cre02.g086700 Chlamydomonas reinhardtii
CsaV3_3G016130 Cucumis sativus L.
CSS0028755 Camellia sinensis var. sinensis
DCAR_020189 Daucus carota
Dinv28576 Davidia involucrata
Duzib147G0620 Durio zibethinus
Duzib205G1908 Durio zibethinus
ECA232G2122 Erigeron canadensis
EL10Ac2g04890 Beta vulgaris
Eucgr.A02893 Eucalyptus grandis
FAN01G0567 Fragaria x ananassa
FAN03G1184 Fragaria x ananassa
FAN06G1216 Fragaria x ananassa
FAN06G1879 Fragaria x ananassa
FAN06G3837 Fragaria x ananassa
FAN10G1756 Fragaria x ananassa
FvH4_7g19100 Fragaria vesca
FvH4_7g27490 Fragaria vesca
Glyma.09G224000 Glycine max
Glyma.12G013000 Glycine max
Gohir.A12G198300 Gossypium hirsutum
Gohir.D12G200900 Gossypium hirsutum
Gorai.008G216000 Gossypium raimondii
GSVIVG01018659001 Vitis vinifera
GSVIVG01036042001 Vitis vinifera
HanXRQChr16g0512771 Helianthus annuus
Hma1.2p1_0432F.1_g151750 Hydrangea macrophylla
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla
HPP92_005318 Vanilla planifolia
HPP92_005319 Vanilla planifolia
HPP92_005328 Vanilla planifolia
Hund13892 Selenicereus undatus
Lalb_Chr03g0024271 Lupinus albus
Lj1A979T84 Lonicera japonica
Lj3g0004511 Lotus japonicus
Lsat_1_v5_gn_9_52061 Lactuca sativa
Manes.06G134600 Manihot esculenta
Mapoly0007s0274 Marchantia polymorpha
MD01G1182800 Malus domestica
MD07G1253600 Malus domestica
MD07G1253700 Malus domestica
Medtr0004s0490 Medicago truncatula
Medtr6g005610 Medicago truncatula
Medtr6g005670 Medicago truncatula
MELO3C006811.2 Cucumis melo
Migut.F00479 Erythranthe guttata
MSTRG.8826 Avicennia marina
Nitab4.5_0000895g0220 Nicotiana tabacum
Nitab4.5_0004558g0010 Nicotiana tabacum
Nitab4.5_0004665g0060 Nicotiana tabacum
Nitab4.5_0019601g0010 Nicotiana tabacum
Nn1g01023 Nelumbo nucifera
Oeu022486.1 Olea europaea
Oeu042559.1 Olea europaea
Os06g0669600 Oryza sativa ssp. japonica
Peaxi162Scf00023g01214 Petunia axillaris
PGR042G2008 Punica granatum
PGSC0003DMG400017618 Solanum tuberosum
Phvul.011G016000 Phaseolus vulgaris
Potri.003G109100 Populus trichocarpa
Pp3c11_26770 Physcomitrium patens
Pp3c7_60 Physcomitrium patens
PRCOL_00005609 Prasinoderma coloniale
Prupe.2G277000 Prunus persica
Psat0s2825g0040 Pisum sativum
Psat7g163200 Pisum sativum
PSO266G0090 Papaver somniferum
PSO384G4058 Papaver somniferum
QL09p005748 Quercus lobata
QL10p003704 Quercus lobata
RcHm_v2.0_Chr1g0374281 Rosa chinensis
Rhsim03G0167200 Rhododendron simsii
Sabra03G0075600 Salix brachista
SalBow5G1900 Salvia bowleyana
SalBow5G5604 Salvia bowleyana
Sc14g0005510 Simmondsia chinensis
Sc14g0005530 Simmondsia chinensis
Sed0001089 Sechium edule
Sed0008837 Sechium edule
SEGI_05738 Sequoiadendron giganteum
SEGI_08321 Sequoiadendron giganteum
SEGI_13446 Sequoiadendron giganteum
SEGI_24302 Sequoiadendron giganteum
SEGI_29591 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16547 Striga asiatica
SHI14003 Sapria himalayana
SMO134G0015 Selaginella moellendorffii
Solyc05g006950.4 Solanum lycopersicum
Sopen05g002910 Solanum pennellii
Sp6g13590 Schrenkiella parvula
TAR082G0001 Trochodendron aralioides
TAR374G0871 Trochodendron aralioides
TAR375G0699 Trochodendron aralioides
THA.LOC104811522 Tarenaya hassleriana
Thecc.03G155600 Theobroma cacao
Thhalv10012691m.g Eutrema salsugineum
TPR.G196 Trifolium pratense
TPR.G20262 Trifolium pratense
TWI39G0203 Tripterygium wilfordii
unitig_37.g11930 Utricularia gibba
vmacro06799 Vaccinium macrocarpon
VMungo1127G1242 Vigna mungo
Zm00001eb389950 Zea mays

User provided reference genes

Program Settings