Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01890 Brassica napus
A04p33250 Brassica napus
A05p04480 Brassica napus
Aa31LG10G14230 Aethionema arabicum
Aa31LG1G25900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1671 Anthoceros agrestis
Actinidia05839 Actinidia chinensis
Actinidia31716 Actinidia chinensis
Actinidia31717 Actinidia chinensis
AL4G43240 Arabidopsis lyrata
AL5G42260 Arabidopsis lyrata
Aqoxy1G00422 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HLF3VC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZSC88Q Arachis hypogaea
AT2G44280 Arabidopsis thaliana
AT3G60070 Arabidopsis thaliana
ATR0001G054 Amborella trichopoda
Atru.chr11.2714 Acer truncatum
Atru.chr12.1432 Acer truncatum
AUR62035404 Chenopodium quinoa
AUR62041888 Chenopodium quinoa
BcaB02g08195 Brassica carinata
BcaB02g08807 Brassica carinata
BcaB06g29367 Brassica carinata
BcaC02g10108 Brassica carinata
BcaNung06603 Brassica carinata
BolC4t22159H Brassica oleracea
BolC4t24833H Brassica oleracea
BolC4t28598H Brassica oleracea
BraA04t15912Z Brassica rapa
BraA04t18786Z Brassica rapa
BraA05t19424Z Brassica rapa
C04p05190 Brassica napus
C04p32650 Brassica napus
C04p70950 Brassica napus
CAN.G1361.4 Capsicum annuum
CAN.G1361.5 Capsicum annuum
CAN.G913.7 Capsicum annuum
CAN.G928.1 Capsicum annuum
CANSAT11G0055 Cannabis sativa
CARHR139460 Cardamine hirsuta
CARHR170380 Cardamine hirsuta
Carub.0004s2687 Capsella rubella
Carub.0005s2680 Capsella rubella
Ca_03221_v3 Cicer arietinum L.
Cc02_g26820 Coffea canephora
CDE04G3336 Ceratophyllum demersum
CDE05G1716 Ceratophyllum demersum
Cfa010700 Carpinus fangiana
Ciclev10031412m.g Citrus clementina
CiPaw.13G000600 Carya illinoinensis
ClCG09G003650 Citrullus lanatus
Cpa.g.c29747 Carica papaya
CsaV3_7G031530 Cucumis sativus L.
CSS0044763 Camellia sinensis var. sinensis
DCAR_024995 Daucus carota
Dinv43503 Davidia involucrata
Duzib068G1099 Durio zibethinus
ECA236G1315 Erigeron canadensis
EL10Ac1g02232 Beta vulgaris
EL10Ac1g02233 Beta vulgaris
Eucgr.E04336 Eucalyptus grandis
FAN01G0042 Fragaria x ananassa
FAN01G0284 Fragaria x ananassa
FAN01G3148 Fragaria x ananassa
FAN06G4582 Fragaria x ananassa
FvH4_c5g00010 Fragaria vesca
Glyma.08G158600 Glycine max
Glyma.15G267700 Glycine max
Glyma.20G091501 Glycine max
Gohir.A08G026600 Gossypium hirsutum
Gohir.D08G037000 Gossypium hirsutum
Gorai.004G035000 Gossypium raimondii
GSVIVG01001349001 Vitis vinifera
HanXRQChr04g0117441 Helianthus annuus
Haze_03276 Corylus avellana
Haze_14723 Corylus avellana
Hma1.2p1_0128F.1_g059850 Hydrangea macrophylla
HPP92_012523 Vanilla planifolia
Hund18992 Selenicereus undatus
Lalb_Chr25g0283741 Lupinus albus
Lj3g0003623 Lotus japonicus
Lj7A562T25 Lonicera japonica
Lsat_1_v5_gn_7_33840 Lactuca sativa
Manes.10G153000 Manihot esculenta
Mapoly0020s0019 Marchantia polymorpha
MBI01_g14445_MAGBIO Magnolia biondii
MD02G1320400 Malus domestica
Medtr2g062270 Medicago truncatula
MELO3C000237.2 Cucumis melo
MELO3C023501.2 Cucumis melo
Migut.B01407 Erythranthe guttata
Migut.B01408 Erythranthe guttata
Migut.B01409 Erythranthe guttata
Nitab4.5_0000468g0180 Nicotiana tabacum
Nitab4.5_0000468g0200 Nicotiana tabacum
Nitab4.5_0004502g0040 Nicotiana tabacum
Nitab4.5_0006570g0020 Nicotiana tabacum
Nn2g15790 Nelumbo nucifera
Nn2g15791 Nelumbo nucifera
Nn7g35919 Nelumbo nucifera
Oeu060709.1 Olea europaea
Os03g0168000 Oryza sativa ssp. japonica
Os06g0628032 Oryza sativa ssp. japonica
Os07g0578200 Oryza sativa ssp. japonica
Peaxi162Scf00245g00710 Petunia axillaris
Peaxi162Scf00402g00940 Petunia axillaris
Peaxi162Scf00402g00941 Petunia axillaris
PGR031G1320 Punica granatum
PGSC0003DMG400007701 Solanum tuberosum
PGSC0003DMG400023279 Solanum tuberosum
PGSC0003DMG400028978 Solanum tuberosum
PGSC0003DMG400031131 Solanum tuberosum
Phvul.005G042600 Phaseolus vulgaris
Potri.001G232100 Populus trichocarpa
Potri.009G024600 Populus trichocarpa
Pp3c17_11410 Physcomitrium patens
Prupe.2G001700 Prunus persica
Psat1g129360 Pisum sativum
Psat2g024040 Pisum sativum
PSO063G0048 Papaver somniferum
PSO170G0355 Papaver somniferum
QL04p001505 Quercus lobata
QL04p001512 Quercus lobata
QL04p001964 Quercus lobata
QL04p001975 Quercus lobata
RcHm_v2.0_Chr1g0313141 Rosa chinensis
Rhsim07G0049300 Rhododendron simsii
Sabra09G0016300 Salix brachista
SalBow5G3691 Salvia bowleyana
Sc03g0003850 Simmondsia chinensis
Sed0009480 Sechium edule
SEGI_18579 Sequoiadendron giganteum
SEGI_30614 Sequoiadendron giganteum
SGA_v2.0_scaffold260G45890 Striga asiatica
SMO353G0186 Selaginella moellendorffii
Solyc01g073660.3 Solanum lycopersicum
Solyc01g073670.3 Solanum lycopersicum
Solyc01g089990.3 Solanum lycopersicum
Sopen01g033220 Solanum pennellii
Sopen01g033230 Solanum pennellii
Sopen10g026790 Solanum pennellii
Sp4g26350 Schrenkiella parvula
Sp5g03140 Schrenkiella parvula
TAR633G0112 Trochodendron aralioides
TAR633G2617 Trochodendron aralioides
THA.LOC104817137 Tarenaya hassleriana
Thecc.08G193200 Theobroma cacao
Thhalv10001436m.g Eutrema salsugineum
Thhalv10005961m.g Eutrema salsugineum
TPR.G16160 Trifolium pratense
TWI09G1596 Tripterygium wilfordii
unitig_749.g13487 Utricularia gibba
vmacro22467 Vaccinium macrocarpon
VMungo1080G0174 Vigna mungo
Zm00001eb005240 Zea mays
Zm00001eb107640 Zea mays
Zm00001eb325500 Zea mays
Zm00001eb402450 Zea mays

User provided reference genes

Program Settings