Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p13070 Brassica napus
A09p40150 Brassica napus
Aa31LG7G8390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis
Actinidia17747 Actinidia chinensis
Actinidia31969 Actinidia chinensis
Ah.08g212630 Amaranthus hybridus
AL1G38970 Arabidopsis lyrata
AL2G28600 Arabidopsis lyrata
Aqoxy3G03464 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea
AT1G26740 Arabidopsis thaliana
AT1G69485 Arabidopsis thaliana
Atru.chr11.1738 Acer truncatum
AUR62031723 Chenopodium quinoa
AUR62032610 Chenopodium quinoa
BcaB03g14086 Brassica carinata
BcaC05g26392 Brassica carinata
BcaC06g35127 Brassica carinata
BolC5t31159H Brassica oleracea
BolC7t42472H Brassica oleracea
BraA07t29078Z Brassica rapa
BraA09t39513Z Brassica rapa
C05p24230 Brassica napus
C07p19550 Brassica napus
CANSAT21G0056 Cannabis sativa
CANSAT21G2357 Cannabis sativa
CARHR025220 Cardamine hirsuta
Carub.0001s2428 Capsella rubella
Carub.0002s1610 Capsella rubella
Ca_18347_v3 Cicer arietinum L.
CBR_g23146 Chara braunii
CBR_g39054 Chara braunii
Cc00_g16630 Coffea canephora
CDE04G0708 Ceratophyllum demersum
CDE07G0585 Ceratophyllum demersum
Cfa004898 Carpinus fangiana
Ciclev10013639m.g Citrus clementina
Ciclev10033055m.g Citrus clementina
CiPaw.06G087700 Carya illinoinensis
ClCG05G024060 Citrullus lanatus
COL.COLO4_27990 Corchorus olitorius
COL.COLO4_27991 Corchorus olitorius
COL.COLO4_32021 Corchorus olitorius
Cpa.g.sc57.38 Carica papaya
Cpa.g.sc69.70 Carica papaya
CsaV3_5G032980 Cucumis sativus L.
CSS0014017 Camellia sinensis var. sinensis
CSS0031140 Camellia sinensis var. sinensis
CSS0040796 Camellia sinensis var. sinensis
DCAR_027429 Daucus carota
Dinv07945 Davidia involucrata
Duzib248G0510 Durio zibethinus
Duzib251G0803 Durio zibethinus
ECA233G6069 Erigeron canadensis
ECA246G0207 Erigeron canadensis
EL10Ac2g02750 Beta vulgaris
Eucgr.D00185 Eucalyptus grandis
FAN07G0300 Fragaria x ananassa
FAN12G3669 Fragaria x ananassa
FAN22G1961 Fragaria x ananassa
FvH4_4g13880 Fragaria vesca
Glyma.04G115800 Glycine max
Glyma.05G118100 Glycine max
Glyma.06G320500 Glycine max
Glyma.08G073000 Glycine max
Glyma.U031405 Glycine max
Gohir.A07G047800 Gossypium hirsutum
Gohir.D07G052100 Gossypium hirsutum
Gorai.001G055100 Gossypium raimondii
HanXRQChr12g0361941 Helianthus annuus
HanXRQChr15g0476941 Helianthus annuus
Haze_11968 Corylus avellana
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla
Hund04421 Selenicereus undatus
Lalb_Chr10g0097781 Lupinus albus
Lj4g0007672 Lotus japonicus
Lj4g0012875 Lotus japonicus
Lsat_1_v5_gn_8_48901 Lactuca sativa
Manes.01G033600 Manihot esculenta
Manes.05G105400 Manihot esculenta
Mapoly0152s0024 Marchantia polymorpha
MBI02_g20485_MAGBIO Magnolia biondii
MBI02_g44667_MAGBIO Magnolia biondii
MCO02G272 Micromonas commoda
MD04G1010200 Malus domestica
Medtr1g025320 Medicago truncatula
MELO3C012119.2 Cucumis melo
Migut.L01259 Erythranthe guttata
MSTRG.2336 Avicennia marina
Nitab4.5_0000014g0150 Nicotiana tabacum
Nitab4.5_0000391g0330 Nicotiana tabacum
Nitab4.5_0001077g0020 Nicotiana tabacum
Nitab4.5_0001726g0150 Nicotiana tabacum
Nitab4.5_0013306g0010 Nicotiana tabacum
Nn3g17306 Nelumbo nucifera
Nn3g18387 Nelumbo nucifera
Oeu001710.1 Olea europaea
Oeu054854.1 Olea europaea
Os03g0168900 Oryza sativa ssp. japonica
Os10g0407100 Oryza sativa ssp. japonica
Peaxi162Scf00023g02531 Petunia axillaris
Peaxi162Scf00222g00329 Petunia axillaris
PGR083G2602 Punica granatum
PGSC0003DMG400002854 Solanum tuberosum
PGSC0003DMG400005564 Solanum tuberosum
Phvul.002G208200 Phaseolus vulgaris
Potri.008G090100 Populus trichocarpa
Potri.010G165100 Populus trichocarpa
Pp3c1_32410 Physcomitrium patens
Prupe.1G009500 Prunus persica
Psat0s1693g0080 Pisum sativum
PSO063G3361 Papaver somniferum
PSO782G1969 Papaver somniferum
QL05p050003 Quercus lobata
RcHm_v2.0_Chr4g0414951 Rosa chinensis
RcHm_v2.0_Chr4g0415001 Rosa chinensis
RcHm_v2.0_Chr6g0251041 Rosa chinensis
Rhsim05G0092000 Rhododendron simsii
RhsimUnG0183400 Rhododendron simsii
Sabra08G0067500 Salix brachista
Sabra10G0125700 Salix brachista
SalBow1G0501 Salvia bowleyana
SalBow1G0857 Salvia bowleyana
SalBow1G1756 Salvia bowleyana
SalBow1G3820 Salvia bowleyana
SalBow1G4390 Salvia bowleyana
SalBow1G4992 Salvia bowleyana
SalBow1G6351 Salvia bowleyana
SalBow1G6948 Salvia bowleyana
SalBow1G7833 Salvia bowleyana
SalBow1G8597 Salvia bowleyana
Sc03g0001820 Simmondsia chinensis
Sc14g0007580 Simmondsia chinensis
Sed0021036 Sechium edule
SEGI_34151 Sequoiadendron giganteum
SGA_v2.0_scaffold455G51899 Striga asiatica
Solyc04g005590.3 Solanum lycopersicum
Solyc05g013190.4 Solanum lycopersicum
Sopen03g017060 Solanum pennellii
Sopen04g001630 Solanum pennellii
Sopen05g007930 Solanum pennellii
Sp1g22070 Schrenkiella parvula
Sp5g24560 Schrenkiella parvula
TAR622G0172 Trochodendron aralioides
THA.LOC104808670 Tarenaya hassleriana
THA.LOC104822040 Tarenaya hassleriana
Thecc.02G341300 Theobroma cacao
Thhalv10009076m.g Eutrema salsugineum
TPR.G5742 Trifolium pratense
TPR.G8852 Trifolium pratense
TWI09G1372 Tripterygium wilfordii
TWI73G0467 Tripterygium wilfordii
vmacro01351 Vaccinium macrocarpon
vmacro01352 Vaccinium macrocarpon
VMungo0251G2924 Vigna mungo
Zm00001eb005320 Zea mays
Zm00001eb402400 Zea mays

User provided reference genes

Program Settings