Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09570 Brassica napus
A10p20060 Brassica napus
Aa31LG3G3160 Aethionema arabicum
Aa31LG3G3180 Aethionema arabicum
Aa31LG3G3190 Aethionema arabicum
Aa31LG3G3200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4490 Anthoceros agrestis
Actinidia07413 Actinidia chinensis
Actinidia32680 Actinidia chinensis
Ah.14g082120 Amaranthus hybridus
Ah.14g082140 Amaranthus hybridus
AL6G31170 Arabidopsis lyrata
Aqoxy7G01635 Aquilegia oxysepala
AT5G19660 Arabidopsis thaliana
ATR0315G070 Amborella trichopoda
Atru.chr7.1362 Acer truncatum
AUR62010981 Chenopodium quinoa
AUR62021490 Chenopodium quinoa
BcaB01g04836 Brassica carinata
BcaB01g04837 Brassica carinata
BolC3t13584H Brassica oleracea
BolC9t58517H Brassica oleracea
BolC9t58518H Brassica oleracea
BraA03t10274Z Brassica rapa
BraA10t44080Z Brassica rapa
C03p11140 Brassica napus
C09p56520 Brassica napus
C09p56530 Brassica napus
CAN.G268.4 Capsicum annuum
CAN.G608.21 Capsicum annuum
CAN.G933.10 Capsicum annuum
CAN.G933.11 Capsicum annuum
CANSAT56G2738 Cannabis sativa
CANSAT56G4378 Cannabis sativa
CARHR193250 Cardamine hirsuta
Carub.0006s1801 Capsella rubella
Ca_20226_v3 Cicer arietinum L.
CBR_g30873 Chara braunii
CBR_g30877 Chara braunii
Cc06_g09760 Coffea canephora
CDE05G1732 Ceratophyllum demersum
Cfa021945 Carpinus fangiana
Ciclev10007326m.g Citrus clementina
CiPaw.03G231000 Carya illinoinensis
ClCG06G008600 Citrullus lanatus
COL.COLO4_34849 Corchorus olitorius
Cpa.g.sc23.98 Carica papaya
Cre02.g076950 Chlamydomonas reinhardtii
Cre14.g628800 Chlamydomonas reinhardtii
CsaV3_1G024300 Cucumis sativus L.
CSS0021602 Camellia sinensis var. sinensis
CSS0024771 Camellia sinensis var. sinensis
CSS0034093 Camellia sinensis var. sinensis
CSS0043571 Camellia sinensis var. sinensis
DCAR_024689 Daucus carota
Dinv36641 Davidia involucrata
Dinv41612 Davidia involucrata
Duzib168G0462 Durio zibethinus
Duzib187G1831 Durio zibethinus
ECA234G1988 Erigeron canadensis
EL10Ac8g18481 Beta vulgaris
Eucgr.C03820 Eucalyptus grandis
FAN19G1993 Fragaria x ananassa
FAN23G1653 Fragaria x ananassa
FAN26G2455 Fragaria x ananassa
FvH4_1g04670 Fragaria vesca
Glyma.07G085500 Glycine max
Glyma.09G191400 Glycine max
Gohir.A05G023600 Gossypium hirsutum
Gohir.A06G119402 Gossypium hirsutum
Gohir.A08G241500 Gossypium hirsutum
Gohir.A08G250201 Gossypium hirsutum
Gohir.A10G147200 Gossypium hirsutum
Gohir.A12G025200 Gossypium hirsutum
Gohir.D04G083366 Gossypium hirsutum
Gohir.D05G025033 Gossypium hirsutum
Gohir.D05G025100 Gossypium hirsutum
Gohir.D07G157100 Gossypium hirsutum
Gohir.D08G262300 Gossypium hirsutum
Gohir.D09G033000 Gossypium hirsutum
Gorai.004G280300 Gossypium raimondii
Gorai.006G096000 Gossypium raimondii
Gorai.009G025200 Gossypium raimondii
GSVIVG01015382001 Vitis vinifera
HanXRQChr10g0318611 Helianthus annuus
Haze_25735 Corylus avellana
Haze_25737 Corylus avellana
Haze_25754 Corylus avellana
HPP92_003938 Vanilla planifolia
Hund26211 Selenicereus undatus
Lalb_Chr09g0331191 Lupinus albus
Lj2g0016785 Lotus japonicus
Lj3g0016708 Lotus japonicus
Lj7A652G69 Lonicera japonica
Lsat_1_v5_gn_5_103081 Lactuca sativa
Lsat_1_v5_gn_5_96741 Lactuca sativa
Lsat_1_v5_gn_8_105101 Lactuca sativa
Manes.16G115100 Manihot esculenta
Mapoly0155s0018 Marchantia polymorpha
MBI01_g28040_MAGBIO Magnolia biondii
MBI04_g39576_MAGBIO Magnolia biondii
MCO08G100 Micromonas commoda
MD02G1045500 Malus domestica
MD15G1183900 Malus domestica
Medtr6g086780 Medicago truncatula
Medtr6g087520 Medicago truncatula
MELO3C025349.2 Cucumis melo
Migut.J01157 Erythranthe guttata
Nitab4.5_0000754g0080 Nicotiana tabacum
Nitab4.5_0000754g0130 Nicotiana tabacum
Nitab4.5_0001142g0040 Nicotiana tabacum
Nitab4.5_0006929g0020 Nicotiana tabacum
Nitab4.5_0007565g0030 Nicotiana tabacum
Nn8g39153 Nelumbo nucifera
Oeu018244.1 Olea europaea
Os06g0163500 Oryza sativa ssp. japonica
Peaxi162Scf00005g04811 Petunia axillaris
PGR102G1372 Punica granatum
PGSC0003DMG400017594 Solanum tuberosum
Phvul.004G164500 Phaseolus vulgaris
Potri.018G081400 Populus trichocarpa
Pp3c3_30280 Physcomitrium patens
Pp3c8_4710 Physcomitrium patens
Pp3s169_40 Physcomitrium patens
PRCOL_00005929 Prasinoderma coloniale
Prupe.7G232300 Prunus persica
Psat1g043400 Pisum sativum
PSO210G2419 Papaver somniferum
PSO210G5975 Papaver somniferum
PSO675G3870 Papaver somniferum
QL02p040000 Quercus lobata
RcHm_v2.0_Chr2g0090281 Rosa chinensis
Rhsim03G0241000 Rhododendron simsii
Sabra18G0068500 Salix brachista
Sc18g0001290 Simmondsia chinensis
Sed0019002 Sechium edule
SEGI_08862 Sequoiadendron giganteum
SEGI_28317 Sequoiadendron giganteum
SEGI_41546 Sequoiadendron giganteum
SGA_v2.0_scaffold176G39378 Striga asiatica
SGA_v2.0_scaffold17G08177 Striga asiatica
SHI02736 Sapria himalayana
SMO347G0168 Selaginella moellendorffii
Solyc09g007300.3 Solanum lycopersicum
Sopen00g009180 Solanum pennellii
Sopen00g009260 Solanum pennellii
Sopen00g011810 Solanum pennellii
Sp6g24730 Schrenkiella parvula
TAR383G1084 Trochodendron aralioides
THA.LOC104804980 Tarenaya hassleriana
Thecc.09G109100 Theobroma cacao
Thhalv10012541m.g Eutrema salsugineum
TPR.G10041 Trifolium pratense
TWI34G1287 Tripterygium wilfordii
unitig_8.g3279 Utricularia gibba
vmacro06222 Vaccinium macrocarpon
VMungo0464G1118 Vigna mungo
VMungo0464G1847 Vigna mungo
Zm00001eb375700 Zea mays

User provided reference genes

Program Settings