Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09350 Brassica napus
Aa31csc464G10 Aethionema arabicum
Actinidia34915 Actinidia chinensis
Ah.00g237940 Amaranthus hybridus
Ah.01g011750 Amaranthus hybridus
Ah.10g027900 Amaranthus hybridus
Ah.10g028280 Amaranthus hybridus
Ah.14g079610 Amaranthus hybridus
Aqoxy12s002 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.19WC2D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea
ATMG01360 Arabidopsis thaliana
ATR1125G006 Amborella trichopoda
AUR62026821 Chenopodium quinoa
AUR62042353 Chenopodium quinoa
AUR62044038 Chenopodium quinoa
BolC4t24790H Brassica oleracea
BolSC28t60311H Brassica oleracea
BolSC28t60367H Brassica oleracea
BraSC159t45726Z Brassica rapa
BraSC48t46236Z Brassica rapa
BraSC48t46324Z Brassica rapa
BraSC48t46325Z Brassica rapa
BraSC54t46365Z Brassica rapa
BraSC54t46366Z Brassica rapa
C04p32420 Brassica napus
CAN.G1103.8 Capsicum annuum
CAN.G1109.10 Capsicum annuum
CAN.G1167.11 Capsicum annuum
CAN.G416.37 Capsicum annuum
CAN.G505.7 Capsicum annuum
CAN.G60.10 Capsicum annuum
CAN.G61.11 Capsicum annuum
CAN.G78.1 Capsicum annuum
CAN.G889.6 Capsicum annuum
CAN.G999.40 Capsicum annuum
CANSAT16G0002 Cannabis sativa
CARHR283530 Cardamine hirsuta
CARHR288190 Cardamine hirsuta
Ca_07436_v3 Cicer arietinum L.
Ca_30901_v3 Cicer arietinum L.
CDE02G4726 Ceratophyllum demersum
ClCG04G003500 Citrullus lanatus
ClCG09G001530 Citrullus lanatus
COL.COLO4_04173 Corchorus olitorius
Cpa.g.sc263.4 Carica papaya
DCAR_032457 Daucus carota
Dinv06725 Davidia involucrata
ECA240G1937 Erigeron canadensis
EL10Ac5g12442 Beta vulgaris
EL10Ac5g12760 Beta vulgaris
Eucgr.E01613 Eucalyptus grandis
Glyma.03G094400 Glycine max
Gohir.D04G096416 Gossypium hirsutum
Gorai.001G162500 Gossypium raimondii
Gorai.013G213100 Gossypium raimondii
GSVIVG01012277001 Vitis vinifera
GSVIVG01020676001 Vitis vinifera
HanXRQChr04g0127211 Helianthus annuus
HanXRQChr04g0127221 Helianthus annuus
HanXRQChr04g0127251 Helianthus annuus
HanXRQChr05g0159721 Helianthus annuus
HanXRQChr08g0236111 Helianthus annuus
HanXRQChr10g0310851 Helianthus annuus
HanXRQChr14g0433461 Helianthus annuus
HanXRQChr16g0503301 Helianthus annuus
HanXRQMTg0579341 Helianthus annuus
Haze_27101 Corylus avellana
Haze_27145 Corylus avellana
Haze_27411 Corylus avellana
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla
HPP92_007209 Vanilla planifolia
Lalb_Chr00c21g0405801 Lupinus albus
Lalb_Chr00c21g0405811 Lupinus albus
Lalb_Chr11g0071071 Lupinus albus
Lalb_Chr20g0115011 Lupinus albus
LjContig00315g0003687 Lotus japonicus
LjContig00315g0010412 Lotus japonicus
Lsat_1_v5_gn_4_114400 Lactuca sativa
Lsat_1_v5_gn_8_134521 Lactuca sativa
Mapoly0006s0021 Marchantia polymorpha
MD13G1127000 Malus domestica
Medtr0024s0110 Medicago truncatula
Medtr8g106255 Medicago truncatula
MELO3C021523.2 Cucumis melo
MELO3C021574.2 Cucumis melo
MELO3C027747.2 Cucumis melo
Migut.E00896 Erythranthe guttata
Migut.E01634 Erythranthe guttata
Nitab4.5_0000019g0180 Nicotiana tabacum
Nitab4.5_0000074g0200 Nicotiana tabacum
Nitab4.5_0000592g0100 Nicotiana tabacum
Nitab4.5_0000866g0210 Nicotiana tabacum
Nitab4.5_0001127g0230 Nicotiana tabacum
Nitab4.5_0001127g0350 Nicotiana tabacum
Nitab4.5_0001234g0100 Nicotiana tabacum
Nitab4.5_0001761g0020 Nicotiana tabacum
Nitab4.5_0002322g0200 Nicotiana tabacum
Nitab4.5_0003938g0030 Nicotiana tabacum
Nitab4.5_0005728g0070 Nicotiana tabacum
Nn003s41396 Nelumbo nucifera
Nn1g09964 Nelumbo nucifera
Nn1g10090 Nelumbo nucifera
Nn1g10125 Nelumbo nucifera
PGR071G0006 Punica granatum
PGSC0003DMG400002971 Solanum tuberosum
Pp3c21_4580 Physcomitrium patens
Pp3c4_28940 Physcomitrium patens
Pp3c4_28946 Physcomitrium patens
Psat0s12108g0080 Pisum sativum
Psat3g040160 Pisum sativum
PSO384G3370 Papaver somniferum
QL04p031979 Quercus lobata
QL10p061777 Quercus lobata
RcHm_v2.0_Chr6g0256731 Rosa chinensis
RcHm_v2.0_MTg0498781 Rosa chinensis
RcHm_v2.0_MTg0498791 Rosa chinensis
RhsimMtG0000400 Rhododendron simsii
SabraMtG0005600 Salix brachista
SalBow1G2743 Salvia bowleyana
Sc08g0004810 Simmondsia chinensis
Sed0009736 Sechium edule
Sed0020696 Sechium edule
Sed0024638 Sechium edule
SEGI_28485 Sequoiadendron giganteum
SGA_v2.0_scaffold400G50927 Striga asiatica
SHI01747 Sapria himalayana
SHI20133 Sapria himalayana
SHI20134 Sapria himalayana
SHI20135 Sapria himalayana
SHI26645 Sapria himalayana
SHI26666 Sapria himalayana
SHI26667 Sapria himalayana
SHI27475 Sapria himalayana
SHI27476 Sapria himalayana
SHI27477 Sapria himalayana
SHI30018 Sapria himalayana
SHI35293 Sapria himalayana
SHI36146 Sapria himalayana
SMO053G0009 Selaginella moellendorffii
Solyc00g500186.1 Solanum lycopersicum
Solyc00g500250.1 Solanum lycopersicum
Solyc00g500349.1 Solanum lycopersicum
Solyc02g021770.1 Solanum lycopersicum
Solyc05g025560.2 Solanum lycopersicum
Solyc07g019510.4 Solanum lycopersicum
Solyc08g029280.2 Solanum lycopersicum
Solyc08g029290.1 Solanum lycopersicum
Solyc11g063610.3 Solanum lycopersicum
Sopen05g012670 Solanum pennellii
Sp3g25790 Schrenkiella parvula
TAR022G0004 Trochodendron aralioides
TPR.G39033 Trifolium pratense
TPR.G4012 Trifolium pratense
TPR.G9938 Trifolium pratense
unitig_87.g28000 Utricularia gibba
unitig_87.g28001 Utricularia gibba

User provided reference genes

Program Settings