Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37490 Brassica napus
A09p68450 Brassica napus
Aa31LG1G9600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2160 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1715 Anthoceros agrestis
Actinidia24840 Actinidia chinensis
Ah.08g212380 Amaranthus hybridus
AL1G12410 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.BFHA12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RD3VC2 Arachis hypogaea
AT1G02970 Arabidopsis thaliana
ATR0598G141 Amborella trichopoda
Atru.chr2.3824 Acer truncatum
Atru.chr5.1223 Acer truncatum
Atru.chr5.1224 Acer truncatum
AUR62008593 Chenopodium quinoa
AUR62033185 Chenopodium quinoa
BcaB01g06383 Brassica carinata
BcaB03g13494 Brassica carinata
BcaC07g36980 Brassica carinata
BcaC07g42280 Brassica carinata
BcaC07g42414 Brassica carinata
BolC8t46839H Brassica oleracea
BraA08t35647Z Brassica rapa
BraA09t42188Z Brassica rapa
C08p00400 Brassica napus
C08p53070 Brassica napus
CAN.G339.41 Capsicum annuum
CANSAT25G0197 Cannabis sativa
CANSAT25G0282 Cannabis sativa
CARHR002300 Cardamine hirsuta
Carub.0001s0210 Capsella rubella
Carub.0033s0002 Capsella rubella
Ca_09139_v3 Cicer arietinum L.
CBR_g44348 Chara braunii
Cc01_g20560 Coffea canephora
Cfa005976 Carpinus fangiana
Cfa025110 Carpinus fangiana
Ciclev10024323m.g Citrus clementina
CiPaw.07G104100 Carya illinoinensis
ClCG09G006150 Citrullus lanatus
COL.COLO4_23400 Corchorus olitorius
COL.COLO4_23401 Corchorus olitorius
Cpa.g.sc9.197 Carica papaya
Cre07.g355250 Chlamydomonas reinhardtii
CsaV3_7G029010 Cucumis sativus L.
CSS0025822 Camellia sinensis var. sinensis
DCAR_012399 Daucus carota
DCAR_018342 Daucus carota
Dinv33024 Davidia involucrata
ECA236G2131 Erigeron canadensis
EL10Ac7g17495 Beta vulgaris
EL10Ac8g19779 Beta vulgaris
Eucgr.H01178 Eucalyptus grandis
Eucgr.H01181 Eucalyptus grandis
Eucgr.H01182 Eucalyptus grandis
Eucgr.H01185 Eucalyptus grandis
FAN15G2314 Fragaria x ananassa
FAN19G1533 Fragaria x ananassa
FAN20G2283 Fragaria x ananassa
FAN24G0904 Fragaria x ananassa
FvH4_c6g00040 Fragaria vesca
Glyma.03G211900 Glycine max
Glyma.13G025500 Glycine max
Gohir.A11G115833 Gossypium hirsutum
Gohir.A11G115866 Gossypium hirsutum
Gohir.A11G115900 Gossypium hirsutum
Gohir.D11G120800 Gossypium hirsutum
Gorai.007G129700 Gossypium raimondii
GSVIVG01010948001 Vitis vinifera
GSVIVG01010952001 Vitis vinifera
HanXRQChr06g0163971 Helianthus annuus
Haze_04870 Corylus avellana
HPP92_021845 Vanilla planifolia
Hund18118 Selenicereus undatus
Lalb_Chr18g0047231 Lupinus albus
Lj1g0006956 Lotus japonicus
Lj2A1189G43 Lonicera japonica
Lsat_1_v5_gn_8_54521 Lactuca sativa
Manes.01G215900 Manihot esculenta
Manes.05G065100 Manihot esculenta
Mapoly0002s0169 Marchantia polymorpha
Mapoly0070s0074 Marchantia polymorpha
MBI16_g23764_MAGBIO Magnolia biondii
MCO13G426 Micromonas commoda
MCO15G441 Micromonas commoda
MD03G1283400 Malus domestica
MD11G1302700 Malus domestica
MD11G1303200 Malus domestica
Medtr7g108500 Medicago truncatula
MELO3C016039.2 Cucumis melo
Migut.I00234 Erythranthe guttata
Migut.I00238 Erythranthe guttata
Migut.I00246 Erythranthe guttata
Migut.K00643 Erythranthe guttata
Migut.M00484 Erythranthe guttata
Migut.N01407 Erythranthe guttata
MSTRG.12600 Avicennia marina
Nitab4.5_0001697g0010 Nicotiana tabacum
Nitab4.5_0009457g0010 Nicotiana tabacum
Nn4g25926 Nelumbo nucifera
Oeu024513.3 Olea europaea
Os02g0135300 Oryza sativa ssp. japonica
Peaxi162Scf00067g00235 Petunia axillaris
PGR090G0002 Punica granatum
PGR119G2278 Punica granatum
PGSC0003DMG400011389 Solanum tuberosum
Phvul.001G172200 Phaseolus vulgaris
Phvul.001G204900 Phaseolus vulgaris
Potri.002G208251 Populus trichocarpa
Potri.014G132400 Populus trichocarpa
Pp3c16_16660 Physcomitrium patens
Pp3c7_5070 Physcomitrium patens
PRCOL_00001413 Prasinoderma coloniale
PRCOL_00003559 Prasinoderma coloniale
Prupe.8G256300 Prunus persica
Psat3g023800 Pisum sativum
PSO210G1618 Papaver somniferum
PSO832G3458 Papaver somniferum
QL12p030151 Quercus lobata
RcHm_v2.0_Chr5g0045731 Rosa chinensis
RcHm_v2.0_Chr5g0045951 Rosa chinensis
RcHm_v2.0_Chr5g0046521 Rosa chinensis
RcHm_v2.0_Chr6g0293261 Rosa chinensis
Rhsim01G0282800 Rhododendron simsii
Sabra02G0151200 Salix brachista
Sabra02G0151800 Salix brachista
SalBow2G0652 Salvia bowleyana
Sc17g0003350 Simmondsia chinensis
Sed0010277 Sechium edule
SEGI_27037 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14354 Striga asiatica
SHI15387 Sapria himalayana
SMO014G0012 Selaginella moellendorffii
SMO114G0004 Selaginella moellendorffii
SMO114G0032 Selaginella moellendorffii
SMO116G0459 Selaginella moellendorffii
SMO117G0113 Selaginella moellendorffii
SMO117G0342 Selaginella moellendorffii
SMO198G0014 Selaginella moellendorffii
SMO201G0100 Selaginella moellendorffii
SMO201G0127 Selaginella moellendorffii
SMO201G0239 Selaginella moellendorffii
SMO268G0028 Selaginella moellendorffii
SMO268G0035 Selaginella moellendorffii
SMO271G0028 Selaginella moellendorffii
SMO308G0073 Selaginella moellendorffii
SMO352G0071 Selaginella moellendorffii
Solyc09g074830.3 Solanum lycopersicum
Sopen09g029670 Solanum pennellii
Sp1g01960 Schrenkiella parvula
THA.LOC104801260 Tarenaya hassleriana
Thecc.01G294900 Theobroma cacao
Thhalv10007445m.g Eutrema salsugineum
TPR.G9637 Trifolium pratense
vmacro14989 Vaccinium macrocarpon
VMungo0540G1844 Vigna mungo
VMungo1383G2476 Vigna mungo
Zm00001eb209170 Zea mays

User provided reference genes

Program Settings