Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p38140 Brassica napus
Aa31LG8G550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5886 Anthoceros agrestis
Actinidia00827 Actinidia chinensis
Actinidia00828 Actinidia chinensis
Actinidia00829 Actinidia chinensis
Actinidia03667 Actinidia chinensis
Actinidia03668 Actinidia chinensis
Actinidia23168 Actinidia chinensis
Ah.06g180940 Amaranthus hybridus
AL3G25150 Arabidopsis lyrata
Aqoxy4G02281 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A7P7U5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DDNH16 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EHT35G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJC4WF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HQ6FCP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P6R29M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QBA8JR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TGLR9V Arachis hypogaea
AT3G13330 Arabidopsis thaliana
ATR0751G071 Amborella trichopoda
Atru.chr2.3782 Acer truncatum
AUR62017172 Chenopodium quinoa
AUR62035634 Chenopodium quinoa
BcaB04g18753 Brassica carinata
BcaC01g03999 Brassica carinata
BolC3t16899H Brassica oleracea
BraA03t12967Z Brassica rapa
C03p46300 Brassica napus
CAN.G623.63 Capsicum annuum
CAN.G623.64 Capsicum annuum
CANSAT11G1644 Cannabis sativa
CARHR087940 Cardamine hirsuta
Carub.0003s1271 Capsella rubella
Ca_14860_v3 Cicer arietinum L.
Ca_14861_v3 Cicer arietinum L.
Ca_14867_v3 Cicer arietinum L.
Ca_31034_v3 Cicer arietinum L.
CBR_g24134 Chara braunii
Cc05_g15580 Coffea canephora
CDE05G3236 Ceratophyllum demersum
Cfa027001 Carpinus fangiana
Ciclev10007234m.g Citrus clementina
CiPaw.11G209600 Carya illinoinensis
CiPaw.12G142100 Carya illinoinensis
ClCG10G004180 Citrullus lanatus
COL.COLO4_07778 Corchorus olitorius
Cpa.g.sc12.80 Carica papaya
Cpa.g.sc12.82 Carica papaya
Cre14.g628702 Chlamydomonas reinhardtii
CsaV3_3G003990 Cucumis sativus L.
CSS0018371 Camellia sinensis var. sinensis
DCAR_013765 Daucus carota
Dinv19653 Davidia involucrata
Duzib213G0320 Durio zibethinus
ECA240G2049 Erigeron canadensis
EL10Ac4g07499 Beta vulgaris
Eucgr.F02001 Eucalyptus grandis
FAN11G1653 Fragaria x ananassa
FAN16G2454 Fragaria x ananassa
FAN21G2952 Fragaria x ananassa
FAN25G2892 Fragaria x ananassa
FvH4_3g41830 Fragaria vesca
Glyma.08G336400 Glycine max
Glyma.18G071500 Glycine max
Gohir.A04G001901 Gossypium hirsutum
Gohir.D05G387450 Gossypium hirsutum
Gorai.009G454100 Gossypium raimondii
GSVIVG01014769001 Vitis vinifera
HanXRQChr03g0079281 Helianthus annuus
HanXRQChr13g0409231 Helianthus annuus
HanXRQChr17g0550271 Helianthus annuus
Haze_09903 Corylus avellana
Haze_09904 Corylus avellana
Hma1.2p1_0193F.1_g084240 Hydrangea macrophylla
HPP92_018915 Vanilla planifolia
Hund22978 Selenicereus undatus
Lalb_Chr18g0050431 Lupinus albus
Lalb_Chr20g0115261 Lupinus albus
Lj1C898T24 Lonicera japonica
Lj6g0015552 Lotus japonicus
Lsat_1_v5_gn_0_5420 Lactuca sativa
Lsat_1_v5_gn_9_89621 Lactuca sativa
Manes.01G005500 Manihot esculenta
Mapoly0069s0005 Marchantia polymorpha
Mapoly0071s0029 Marchantia polymorpha
MBI15_g37116_MAGBIO Magnolia biondii
MCO11G531 Micromonas commoda
MD00G1206400 Malus domestica
MD00G1206500 Malus domestica
MD00G1206600 Malus domestica
MD03G1040600 Malus domestica
MD11G1042000 Malus domestica
Medtr3g461500 Medicago truncatula
Medtr3g461520 Medicago truncatula
MELO3C014086.2 Cucumis melo
Migut.M01591 Erythranthe guttata
MSTRG.15824 Avicennia marina
Nitab4.5_0000152g0130 Nicotiana tabacum
Nitab4.5_0001303g0050 Nicotiana tabacum
Nn1g08306 Nelumbo nucifera
Nn1g08312 Nelumbo nucifera
Oeu013013.2 Olea europaea
Os06g0301300 Oryza sativa ssp. japonica
Peaxi162Scf00232g00530 Petunia axillaris
PGR083G0052 Punica granatum
PGSC0003DMG401022150 Solanum tuberosum
PGSC0003DMG402022150 Solanum tuberosum
Phvul.006G061700 Phaseolus vulgaris
Potri.001G470600 Populus trichocarpa
Potri.011G167650 Populus trichocarpa
Potri.011G167700 Populus trichocarpa
Pp3c15_5520 Physcomitrium patens
Pp3c20_11540 Physcomitrium patens
PRCOL_00006556 Prasinoderma coloniale
Prupe.6G032900 Prunus persica
Psat4g112520 Pisum sativum
Psat5g106440 Pisum sativum
Psat5g164120 Pisum sativum
Psat5g188200 Pisum sativum
Psat6g097520 Pisum sativum
PSO210G5731 Papaver somniferum
PSO541G1144 Papaver somniferum
QL08p000755 Quercus lobata
QL08p000781 Quercus lobata
QL10p044954 Quercus lobata
RcHm_v2.0_Chr5g0075021 Rosa chinensis
Rhsim04G0008600 Rhododendron simsii
Sabra11G0138700 Salix brachista
SalBow8G2487 Salvia bowleyana
SalBow8G3417 Salvia bowleyana
Sc20g0000040 Simmondsia chinensis
Sed0018073 Sechium edule
SEGI_13123 Sequoiadendron giganteum
SEGI_15666 Sequoiadendron giganteum
SEGI_18126 Sequoiadendron giganteum
SEGI_32129 Sequoiadendron giganteum
SEGI_38328 Sequoiadendron giganteum
SMO184G0002 Selaginella moellendorffii
SMO239G0001 Selaginella moellendorffii
SMO340G0109 Selaginella moellendorffii
Solyc07g066030.4 Solanum lycopersicum
Sopen07g034220 Solanum pennellii
Sp3g11530 Schrenkiella parvula
TAR627G0331 Trochodendron aralioides
THA.LOC104822705 Tarenaya hassleriana
Thecc.07G003100 Theobroma cacao
Thhalv10019881m.g Eutrema salsugineum
TPR.G14720 Trifolium pratense
TWI38G2299 Tripterygium wilfordii
unitig_699.g19598 Utricularia gibba
vmacro09603 Vaccinium macrocarpon
VMungo0110G0001 Vigna mungo
VMungo0540G1109 Vigna mungo
VMungo0540G2510 Vigna mungo
VMungo1127G2045 Vigna mungo
VMungo1215G1327 Vigna mungo
Zm00001eb281130 Zea mays

User provided reference genes

Program Settings