Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01660 Brassica napus
A09p52640 Brassica napus
Aa31LG3G11700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1021 Anthoceros agrestis
Ah.13g077510 Amaranthus hybridus
AL5G42600 Arabidopsis lyrata
Aqoxy2G03324 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea
AT3G60360 Arabidopsis thaliana
ATR1096G046 Amborella trichopoda
ATR1096G053 Amborella trichopoda
Atru.chr2.471 Acer truncatum
AUR62022353 Chenopodium quinoa
AUR62034356 Chenopodium quinoa
BcaB02g08172 Brassica carinata
BcaC02g10151 Brassica carinata
BcaC07g42771 Brassica carinata
BolC8t51130H Brassica oleracea
BraA04t15890Z Brassica rapa
BraA09t40693Z Brassica rapa
C04p32210 Brassica napus
C08p35370 Brassica napus
CAN.G641.37 Capsicum annuum
CANSAT56G3883 Cannabis sativa
CARHR037650 Cardamine hirsuta
CARHR170680 Cardamine hirsuta
Carub.0005s2711 Capsella rubella
Carub.0007s2695 Capsella rubella
Ca_08745_v3 Cicer arietinum L.
Ca_18320_v3 Cicer arietinum L.
CBR_g26482 Chara braunii
Cc06_g18540 Coffea canephora
CDE07G0548 Ceratophyllum demersum
CDE07G1261 Ceratophyllum demersum
CDE07G2032 Ceratophyllum demersum
Cfa002196 Carpinus fangiana
Cfa023089 Carpinus fangiana
Ciclev10010418m.g Citrus clementina
Ciclev10012657m.g Citrus clementina
CiPaw.08G117500 Carya illinoinensis
ClCG09G010350 Citrullus lanatus
ClCG11G010890 Citrullus lanatus
COL.COLO4_07074 Corchorus olitorius
Cpa.g.sc115.24 Carica papaya
Cre13.g573050 Chlamydomonas reinhardtii
CsaV3_2G009570 Cucumis sativus L.
CsaV3_7G024290 Cucumis sativus L.
CSS0023033 Camellia sinensis var. sinensis
CSS0027948 Camellia sinensis var. sinensis
DCAR_020613 Daucus carota
Dinv14546 Davidia involucrata
Dinv37065 Davidia involucrata
Duzib052G0496 Durio zibethinus
Duzib248G1029 Durio zibethinus
ECA238G1549 Erigeron canadensis
ECA238G4589 Erigeron canadensis
EL10Ac1g01672 Beta vulgaris
EL10Ac9g22646 Beta vulgaris
Eucgr.A02172 Eucalyptus grandis
FAN11G1137 Fragaria x ananassa
FAN16G0044 Fragaria x ananassa
FAN21G3808 Fragaria x ananassa
FAN25G0149 Fragaria x ananassa
FvH4_3g21660 Fragaria vesca
Glyma.05G122300 Glycine max
Glyma.08G077300 Glycine max
Gohir.A06G180300 Gossypium hirsutum
Gohir.A06G180400 Gossypium hirsutum
Gohir.A08G129500 Gossypium hirsutum
Gohir.A12G148851 Gossypium hirsutum
Gohir.D10G227700 Gossypium hirsutum
Gorai.011G260100 Gossypium raimondii
GSVIVG01029836001 Vitis vinifera
HanXRQChr14g0437741 Helianthus annuus
Haze_23723 Corylus avellana
Haze_26248 Corylus avellana
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla
HPP92_027481 Vanilla planifolia
Hund15691 Selenicereus undatus
Hund22289 Selenicereus undatus
Lalb_Chr13g0291551 Lupinus albus
Lj6g0006960 Lotus japonicus
Lj7A661T48 Lonicera japonica
Lsat_1_v5_gn_2_52561 Lactuca sativa
Manes.11G057800 Manihot esculenta
Mapoly0074s0052 Marchantia polymorpha
MBI13_g30229_MAGBIO Magnolia biondii
MCO16G699 Micromonas commoda
MD03G1213500 Malus domestica
MD03G1213700 Malus domestica
MD11G1228400 Malus domestica
MD11G1228500 Malus domestica
MD11G1228700 Malus domestica
MD15G1425000 Malus domestica
Medtr4g094380 Medicago truncatula
MELO3C008757.2 Cucumis melo
MELO3C023654.2 Cucumis melo
Migut.J01686 Erythranthe guttata
MSTRG.6389 Avicennia marina
Nitab4.5_0000082g0350 Nicotiana tabacum
Nitab4.5_0000646g0260 Nicotiana tabacum
Nitab4.5_0002805g0150 Nicotiana tabacum
Nitab4.5_0010736g0010 Nicotiana tabacum
Nn5g28465 Nelumbo nucifera
Oeu020249.1 Olea europaea
Oeu059357.1 Olea europaea
Oeu059360.1 Olea europaea
Oeu059364.1 Olea europaea
Os01g0810000 Oryza sativa ssp. japonica
Peaxi162Scf00002g10416 Petunia axillaris
PGR042G0151 Punica granatum
PGSC0003DMG400008162 Solanum tuberosum
Phvul.002G203400 Phaseolus vulgaris
Potri.006G026002 Populus trichocarpa
Potri.016G024300 Populus trichocarpa
Pp3c3_27620 Physcomitrium patens
Pp3s222_10 Physcomitrium patens
PRCOL_00003072 Prasinoderma coloniale
Prupe.4G200900 Prunus persica
Prupe.8G106900 Prunus persica
Psat3g051800 Pisum sativum
Psat7g095600 Pisum sativum
PSO210G0815 Papaver somniferum
PSO210G2223 Papaver somniferum
PSO210G4508 Papaver somniferum
QL09p051267 Quercus lobata
RcHm_v2.0_Chr5g0037141 Rosa chinensis
RhsimUnG0021500 Rhododendron simsii
RhsimUnG0117400 Rhododendron simsii
Sabra16G0021800 Salix brachista
Sabra16G0030200 Salix brachista
SalBow6G4182 Salvia bowleyana
SalBow8G3341 Salvia bowleyana
Sc15g0002670 Simmondsia chinensis
Sed0018245 Sechium edule
SGA_v2.0_scaffold105G30334 Striga asiatica
SGA_v2.0_scaffold69G23138 Striga asiatica
SMO367G0994 Selaginella moellendorffii
Solyc10g079430.2 Solanum lycopersicum
Sopen10g030070 Solanum pennellii
Sp5g02860 Schrenkiella parvula
SpUn0080_0040 Schrenkiella parvula
TAR374G0360 Trochodendron aralioides
TAR633G0556 Trochodendron aralioides
TAR636G0629 Trochodendron aralioides
THA.LOC104802556 Tarenaya hassleriana
THA.LOC104820245 Tarenaya hassleriana
Thecc.05G127100 Theobroma cacao
Thhalv10006222m.g Eutrema salsugineum
TPR.G23804 Trifolium pratense
TWI38G0613 Tripterygium wilfordii
TWI77G0822 Tripterygium wilfordii
unitig_746.g26802 Utricularia gibba
vmacro07599 Vaccinium macrocarpon
VMungo0251G1523 Vigna mungo
Zm00001eb180730 Zea mays
Zm00001eb369240 Zea mays

User provided reference genes

Program Settings