Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia34683 Actinidia chinensis
arahy.Tifrunner.gnm1.ann1.1UV8VN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FEKM9F Arachis hypogaea
ATR0618G236 Amborella trichopoda
Atru.chr6.3093 Acer truncatum
Atru.chr9.71 Acer truncatum
CAN.G65.75 Capsicum annuum
CAN.G929.20 Capsicum annuum
CANSAT64G3027 Cannabis sativa
Ca_27163_v3 Cicer arietinum L.
CDE02G0511 Ceratophyllum demersum
CDE02G2928 Ceratophyllum demersum
CDE04G1759 Ceratophyllum demersum
CDE05G0231 Ceratophyllum demersum
CDE05G3012 Ceratophyllum demersum
CDE08G0908 Ceratophyllum demersum
Cfa014497 Carpinus fangiana
Cfa014498 Carpinus fangiana
Cfa014499 Carpinus fangiana
Cfa014501 Carpinus fangiana
Ciclev10018263m.g Citrus clementina
Ciclev10018551m.g Citrus clementina
ClCG01G014790 Citrullus lanatus
COL.COLO4_08720 Corchorus olitorius
Cpa.g.sc168.9 Carica papaya
Cpa.g.sc34.58 Carica papaya
Cre17.g744797 Chlamydomonas reinhardtii
CsaV3_1G007540 Cucumis sativus L.
CSS0033935 Camellia sinensis var. sinensis
DCAR_011683 Daucus carota
Dinv02572 Davidia involucrata
Dinv02574 Davidia involucrata
Dinv06404 Davidia involucrata
Dinv06405 Davidia involucrata
Dinv11730 Davidia involucrata
Duzib128G0682 Durio zibethinus
Duzib177G0816 Durio zibethinus
Eucgr.H00653 Eucalyptus grandis
FAN02G0641 Fragaria x ananassa
FAN04G0338 Fragaria x ananassa
FAN04G1556 Fragaria x ananassa
FAN05G1920 Fragaria x ananassa
FAN08G0131 Fragaria x ananassa
FAN08G1550 Fragaria x ananassa
FAN08G2030 Fragaria x ananassa
FAN09G3058 Fragaria x ananassa
FAN13G2071 Fragaria x ananassa
FAN13G2826 Fragaria x ananassa
FAN13G3043 Fragaria x ananassa
FAN14G2835 Fragaria x ananassa
FAN18G1654 Fragaria x ananassa
FAN18G3124 Fragaria x ananassa
FAN18G3802 Fragaria x ananassa
FvH4_5g18040 Fragaria vesca
FvH4_5g18430 Fragaria vesca
FvH4_5g18461 Fragaria vesca
FvH4_6g44320 Fragaria vesca
Glyma.09G164300 Glycine max
Glyma.16G212800 Glycine max
Gohir.A13G089745 Gossypium hirsutum
Gohir.A13G089790 Gossypium hirsutum
Gohir.A13G153800 Gossypium hirsutum
Gohir.D13G093200 Gossypium hirsutum
Gohir.D13G158400 Gossypium hirsutum
Gorai.010G140500 Gossypium raimondii
Gorai.013G179100 Gossypium raimondii
GSVIVG01000446001 Vitis vinifera
GSVIVG01024252001 Vitis vinifera
GSVIVG01029323001 Vitis vinifera
Haze_01938 Corylus avellana
Haze_01942 Corylus avellana
Haze_13045 Corylus avellana
Haze_18337 Corylus avellana
HPP92_022512 Vanilla planifolia
Hund01213 Selenicereus undatus
Lalb_Chr14g0370211 Lupinus albus
Lalb_Chr22g0354001 Lupinus albus
Lalb_Chr24g0398601 Lupinus albus
Lj2g0011080 Lotus japonicus
Lj5A167G40 Lonicera japonica
Lj9P233T36 Lonicera japonica
Lj9P411T44 Lonicera japonica
Mapoly0005s0070 Marchantia polymorpha
MBI02_g39755_MAGBIO Magnolia biondii
MBI03_g26653_MAGBIO Magnolia biondii
MBI06_g11152_MAGBIO Magnolia biondii
MD06G1235900 Malus domestica
MD14G1242900 Malus domestica
MD17G1087100 Malus domestica
Medtr6g077930 Medicago truncatula
MELO3C002172.2 Cucumis melo
MELO3C035753.2 Cucumis melo
Nitab4.5_0000033g0370 Nicotiana tabacum
Nitab4.5_0000339g0110 Nicotiana tabacum
Nitab4.5_0000339g0130 Nicotiana tabacum
Nitab4.5_0000782g0040 Nicotiana tabacum
Nitab4.5_0003040g0050 Nicotiana tabacum
Nitab4.5_0011808g0010 Nicotiana tabacum
Oeu057519.1 Olea europaea
Os06g0729500 Oryza sativa ssp. japonica
Os08g0100600 Oryza sativa ssp. japonica
Peaxi162Scf00171g00234 Petunia axillaris
Peaxi162Scf00643g00541 Petunia axillaris
PGR083G0180 Punica granatum
PGSC0003DMG400010150 Solanum tuberosum
PGSC0003DMG400045819 Solanum tuberosum
Phvul.004G138800 Phaseolus vulgaris
Phvul.004G138850 Phaseolus vulgaris
Phvul.L001671 Phaseolus vulgaris
Potri.004G068700 Populus trichocarpa
Potri.013G149400 Populus trichocarpa
Potri.017G151740 Populus trichocarpa
Potri.017G152601 Populus trichocarpa
Potri.019G119100 Populus trichocarpa
Prupe.3G227600 Prunus persica
Prupe.5G240600 Prunus persica
Prupe.8G055500 Prunus persica
Psat0s1805g0040 Pisum sativum
PSO063G4972 Papaver somniferum
PSO541G4256 Papaver somniferum
PSO675G1505 Papaver somniferum
PSO782G2500 Papaver somniferum
QL10p034152 Quercus lobata
RcHm_v2.0_Chr1g0318131 Rosa chinensis
RcHm_v2.0_Chr1g0318141 Rosa chinensis
RcHm_v2.0_Chr2g0161201 Rosa chinensis
RcHm_v2.0_Chr7g0177041 Rosa chinensis
RcHm_v2.0_Chr7g0177561 Rosa chinensis
Rhsim08G0124700 Rhododendron simsii
Sabra04G0046400 Salix brachista
Sabra17G0125600 Salix brachista
Sabra19G0119700 Salix brachista
Sabra19G0119900 Salix brachista
Sabra19G0134100 Salix brachista
Sabra19G0134300 Salix brachista
Sc21g0002160 Simmondsia chinensis
Sc21g0002170 Simmondsia chinensis
Sed0013312 Sechium edule
SEGI_00201 Sequoiadendron giganteum
SMO358G0009 Selaginella moellendorffii
Solyc03g098630.4 Solanum lycopersicum
Sopen03g029340 Solanum pennellii
Sopen06g028600 Solanum pennellii
Sopen06g028620 Solanum pennellii
TAR371G0876 Trochodendron aralioides
TAR627G0950 Trochodendron aralioides
TAR629G0199 Trochodendron aralioides
TAR629G2105 Trochodendron aralioides
Thecc.02G167600 Theobroma cacao
Thecc.05G197800 Theobroma cacao
TPR.G19877 Trifolium pratense
TWI18G0522 Tripterygium wilfordii
TWI81G0141 Tripterygium wilfordii
vmacro17741 Vaccinium macrocarpon
VMungo0464G0747 Vigna mungo
VMungo0464G1978 Vigna mungo
Zm00001eb198730 Zea mays
Zm00001eb261400 Zea mays
Zm00001eb271850 Zea mays

User provided reference genes

Program Settings