Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p24580 Brassica napus
A09p09200 Brassica napus
Aa31LG1G16250 Aethionema arabicum
Aa31LG4G18240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2437 Anthoceros agrestis
Actinidia11961 Actinidia chinensis
Actinidia36420 Actinidia chinensis
AL5G29710 Arabidopsis lyrata
Aqoxy6G02924 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1FYE2A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SGKS0T Arachis hypogaea
AT3G49750 Arabidopsis thaliana
AT5G65830 Arabidopsis thaliana
ATR0730G160 Amborella trichopoda
ATR0739G175 Amborella trichopoda
Atru.chr3.1065 Acer truncatum
AUR62004034 Chenopodium quinoa
AUR62007543 Chenopodium quinoa
BcaB01g00676 Brassica carinata
BcaB04g20032 Brassica carinata
BcaB04g20035 Brassica carinata
BcaB05g23149 Brassica carinata
BcaC04g23244 Brassica carinata
BcaC04g23245 Brassica carinata
BcaC07g39438 Brassica carinata
BcaC09g49968 Brassica carinata
BolC1t03001H Brassica oleracea
BolC8t50091H Brassica oleracea
BolC9t53969H Brassica oleracea
BraA01t02368Z Brassica rapa
BraA09t36572Z Brassica rapa
C01p30660 Brassica napus
C08p24770 Brassica napus
C09p10730 Brassica napus
CAN.G1343.10 Capsicum annuum
CANSAT25G2808 Cannabis sativa
CARHR158830 Cardamine hirsuta
CARHR279830 Cardamine hirsuta
Carub.0005s1611 Capsella rubella
Carub.0008s2672 Capsella rubella
Ca_24669_v3 Cicer arietinum L.
Cc07_g07400 Coffea canephora
CDE01G0566 Ceratophyllum demersum
CDE12G0864 Ceratophyllum demersum
Ciclev10026270m.g Citrus clementina
CiPaw.01G001600 Carya illinoinensis
ClCG01G017820 Citrullus lanatus
COL.COLO4_11620 Corchorus olitorius
Cpa.g.sc129.69 Carica papaya
CsaV3_6G044360 Cucumis sativus L.
CSS0027520 Camellia sinensis var. sinensis
CSS0031628 Camellia sinensis var. sinensis
CSS0048095 Camellia sinensis var. sinensis
DCAR_025824 Daucus carota
Dinv23049 Davidia involucrata
Dinv26963 Davidia involucrata
Duzib147G0417 Durio zibethinus
Duzib187G1832 Durio zibethinus
Duzib264G0041 Durio zibethinus
EL10Ac6g15591 Beta vulgaris
Eucgr.I00670 Eucalyptus grandis
FAN19G0418 Fragaria x ananassa
FAN23G2001 Fragaria x ananassa
FAN26G2218 Fragaria x ananassa
FAN28G1986 Fragaria x ananassa
FvH4_1g18280 Fragaria vesca
Glyma.01G196000 Glycine max
Glyma.11G045700 Glycine max
Gohir.A02G149500 Gossypium hirsutum
Gohir.A11G211900 Gossypium hirsutum
Gohir.A12G080600 Gossypium hirsutum
Gohir.D03G030300 Gossypium hirsutum
Gohir.D11G211000 Gossypium hirsutum
Gohir.D12G077300 Gossypium hirsutum
Gorai.003G032400 Gossypium raimondii
Gorai.007G226700 Gossypium raimondii
Gorai.008G086100 Gossypium raimondii
GSVIVG01007390001 Vitis vinifera
HanXRQChr04g0112451 Helianthus annuus
HanXRQChr05g0162291 Helianthus annuus
HanXRQChr11g0323561 Helianthus annuus
HanXRQChr14g0447741 Helianthus annuus
Haze_15019 Corylus avellana
Hma1.2p1_1139F.1_g260820 Hydrangea macrophylla
HPP92_020623 Vanilla planifolia
Lalb_Chr16g0379001 Lupinus albus
Lj2g0022505 Lotus japonicus
Lj4P166T18 Lonicera japonica
Lj7C113T0 Lonicera japonica
Lsat_1_v5_gn_2_80060 Lactuca sativa
Lsat_1_v5_gn_3_85800 Lactuca sativa
Lsat_1_v5_gn_4_158441 Lactuca sativa
Manes.12G117900 Manihot esculenta
Manes.13G108600 Manihot esculenta
Mapoly0037s0017 Marchantia polymorpha
MBI16_g04107_MAGBIO Magnolia biondii
MBI16_g37622_MAGBIO Magnolia biondii
MD02G1190100 Malus domestica
MD15G1301200 Malus domestica
Medtr5g015050 Medicago truncatula
MELO3C007658.2 Cucumis melo
Migut.H00322 Erythranthe guttata
Migut.L00429 Erythranthe guttata
MSTRG.15342 Avicennia marina
MSTRG.23652 Avicennia marina
MSTRG.2802 Avicennia marina
MSTRG.3484 Avicennia marina
Nitab4.5_0000142g0410 Nicotiana tabacum
Nitab4.5_0000776g0070 Nicotiana tabacum
Nn5g30677 Nelumbo nucifera
Nn6g34534 Nelumbo nucifera
Oeu013345.1 Olea europaea
Oeu034346.1 Olea europaea
Os09g0131200 Oryza sativa ssp. japonica
Peaxi162Scf00096g00187 Petunia axillaris
PGR004G2554 Punica granatum
PGSC0003DMG400043061 Solanum tuberosum
Phvul.002G009000 Phaseolus vulgaris
Potri.007G007500 Populus trichocarpa
Potri.014G012300 Populus trichocarpa
Pp3c11_20500 Physcomitrium patens
Pp3c7_5330 Physcomitrium patens
Prupe.6G216300 Prunus persica
Psat0s1639g0080 Pisum sativum
PSO017G0995 Papaver somniferum
PSO170G0158 Papaver somniferum
QL06p038806 Quercus lobata
RcHm_v2.0_Chr2g0108871 Rosa chinensis
Rhsim10G0094600 Rhododendron simsii
Sabra07G0005800 Salix brachista
Sabra14G0006900 Salix brachista
SalBow1G8006 Salvia bowleyana
SalBow3G2616 Salvia bowleyana
Sc03g0002680 Simmondsia chinensis
Sc03g0002710 Simmondsia chinensis
Sed0004587 Sechium edule
SEGI_31883 Sequoiadendron giganteum
SGA_v2.0_scaffold269G46278 Striga asiatica
SMO351G0231 Selaginella moellendorffii
Solyc02g092040.1 Solanum lycopersicum
Sopen02g036620 Solanum pennellii
Sp2g28920 Schrenkiella parvula
Sp5g12330 Schrenkiella parvula
TAR381G1318 Trochodendron aralioides
TAR625G0245 Trochodendron aralioides
TAR628G0079 Trochodendron aralioides
THA.LOC104827740 Tarenaya hassleriana
Thecc.01G076900 Theobroma cacao
Thhalv10005320m.g Eutrema salsugineum
Thhalv10010947m.g Eutrema salsugineum
TPR.G9333 Trifolium pratense
TWI74G0505 Tripterygium wilfordii
TWI77G0125 Tripterygium wilfordii
vmacro04599 Vaccinium macrocarpon
vmacro04600 Vaccinium macrocarpon
vmacro23340 Vaccinium macrocarpon
VMungo1215G0719 Vigna mungo
Zm00001eb192660 Zea mays
Zm00001eb257530 Zea mays

User provided reference genes

Program Settings