Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p25130 Brassica napus
A08p09320 Brassica napus
A09p34000 Brassica napus
Aa31LG2G13810 Aethionema arabicum
Actinidia01316 Actinidia chinensis
Actinidia01317 Actinidia chinensis
Actinidia29340 Actinidia chinensis
Actinidia29341 Actinidia chinensis
AL1G46330 Arabidopsis lyrata
Aqoxy3G02176 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea
AT1G32200 Arabidopsis thaliana
ATR0829G164 Amborella trichopoda
Atru.chr6.1525 Acer truncatum
AUR62007353 Chenopodium quinoa
AUR62018641 Chenopodium quinoa
BcaB03g13753 Brassica carinata
BcaB04g17996 Brassica carinata
BcaB07g32892 Brassica carinata
BcaC05g27251 Brassica carinata
BcaC05g27905 Brassica carinata
BcaC07g37628 Brassica carinata
BolC5t31883H Brassica oleracea
BolC8t47999H Brassica oleracea
BraA05t21393Z Brassica rapa
BraA08t32930Z Brassica rapa
BraA09t38946Z Brassica rapa
C05p31600 Brassica napus
C05p39140 Brassica napus
CAN.G726.25 Capsicum annuum
CANSAT01G0127 Cannabis sativa
CARHR031570 Cardamine hirsuta
Carub.0001s3053 Capsella rubella
Ca_25177_v3 Cicer arietinum L.
CBR_g4494 Chara braunii
Cc08_g03490 Coffea canephora
CDE04G2515 Ceratophyllum demersum
CDE12G0245 Ceratophyllum demersum
Cfa012505 Carpinus fangiana
Ciclev10001047m.g Citrus clementina
CiPaw.11G098500 Carya illinoinensis
CiPaw.12G068400 Carya illinoinensis
ClCG09G011630 Citrullus lanatus
COL.COLO4_16939 Corchorus olitorius
Cpa.g.sc208.3 Carica papaya
Cpa.g.sc208.5 Carica papaya
Cre02.g143000 Chlamydomonas reinhardtii
CsaV3_3G048840 Cucumis sativus L.
CSS0001538 Camellia sinensis var. sinensis
CSS0024637 Camellia sinensis var. sinensis
DCAR_004271 Daucus carota
DCAR_008221 Daucus carota
Dinv25262 Davidia involucrata
Dinv29004 Davidia involucrata
Duzib068G1409 Durio zibethinus
Duzib205G0301 Durio zibethinus
ECA240G3299 Erigeron canadensis
EL10Ac5g12011 Beta vulgaris
EL10Ac5g12013 Beta vulgaris
Eucgr.A01818 Eucalyptus grandis
Eucgr.E00228 Eucalyptus grandis
Eucgr.E01634 Eucalyptus grandis
FAN04G1490 Fragaria x ananassa
FAN08G3243 Fragaria x ananassa
FAN13G3061 Fragaria x ananassa
FAN18G1908 Fragaria x ananassa
FAN18G3814 Fragaria x ananassa
FvH4_5g23060 Fragaria vesca
Glyma.01G014200 Glycine max
Glyma.09G207900 Glycine max
Gohir.A03G000032 Gossypium hirsutum
Gohir.A08G153600 Gossypium hirsutum
Gohir.A11G028600 Gossypium hirsutum
Gohir.D02G128750 Gossypium hirsutum
Gohir.D02G161780 Gossypium hirsutum
Gohir.D03G176300 Gossypium hirsutum
Gohir.D08G117301 Gossypium hirsutum
Gohir.D08G174500 Gossypium hirsutum
Gohir.D10G176966 Gossypium hirsutum
Gohir.D11G030600 Gossypium hirsutum
Gohir.D11G228750 Gossypium hirsutum
Gohir.D11G251850 Gossypium hirsutum
Gohir.D13G135501 Gossypium hirsutum
Gorai.003G185500 Gossypium raimondii
Gorai.004G182200 Gossypium raimondii
Gorai.007G033500 Gossypium raimondii
Gorai.008G116000 Gossypium raimondii
Gorai.011G197900 Gossypium raimondii
GSVIVG01013060001 Vitis vinifera
HanXRQChr03g0083251 Helianthus annuus
HanXRQChr06g0172791 Helianthus annuus
HanXRQChr13g0414231 Helianthus annuus
HanXRQChr16g0500211 Helianthus annuus
Haze_08160 Corylus avellana
Haze_08164 Corylus avellana
Haze_20066 Corylus avellana
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla
HPP92_020895 Vanilla planifolia
HPP92_029153 Vanilla planifolia
Lalb_Chr09g0325481 Lupinus albus
Lalb_Chr16g0381061 Lupinus albus
Lj2A231G41 Lonicera japonica
Lj4g0001331 Lotus japonicus
Lsat_1_v5_gn_6_80100 Lactuca sativa
Manes.17G018849 Manihot esculenta
Mapoly0045s0098 Marchantia polymorpha
MBI04_g32203_MAGBIO Magnolia biondii
MBI15_g25773_MAGBIO Magnolia biondii
MCO03G317 Micromonas commoda
MD06G1026700 Malus domestica
MD16G1279400 Malus domestica
Medtr5g029230 Medicago truncatula
MELO3C003440.2 Cucumis melo
Migut.E00743 Erythranthe guttata
MSTRG.24848 Avicennia marina
Nitab4.5_0000529g0120 Nicotiana tabacum
Nitab4.5_0012493g0010 Nicotiana tabacum
Nn1g00218 Nelumbo nucifera
Nn3g19385 Nelumbo nucifera
Oeu027094.2 Olea europaea
Os10g0577900 Oryza sativa ssp. japonica
Peaxi162Scf00170g00818 Petunia axillaris
PGR042G1943 Punica granatum
PGSC0003DMG401014796 Solanum tuberosum
Phvul.002G136600 Phaseolus vulgaris
Potri.001G136600 Populus trichocarpa
Pp3c7_2970 Physcomitrium patens
PRCOL_00006772 Prasinoderma coloniale
Prupe.5G027200 Prunus persica
Psat2g139000 Pisum sativum
PSO063G4347 Papaver somniferum
PSO782G3212 Papaver somniferum
QL12p001672 Quercus lobata
RcHm_v2.0_Chr5g0062811 Rosa chinensis
RcHm_v2.0_Chr7g0211781 Rosa chinensis
Rhsim11G0021900 Rhododendron simsii
Sabra01G0105700 Salix brachista
Sc01g0007150 Simmondsia chinensis
Sed0022223 Sechium edule
SEGI_02196 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41070 Striga asiatica
SMO244G0022 Selaginella moellendorffii
Solyc08g076470.4 Solanum lycopersicum
Sopen08g025050 Solanum pennellii
Sp1g27880 Schrenkiella parvula
TAR629G2035 Trochodendron aralioides
THA.LOC104812759 Tarenaya hassleriana
THA.LOC104814413 Tarenaya hassleriana
Thecc.03G310400 Theobroma cacao
Thhalv10007540m.g Eutrema salsugineum
TPR.G19434 Trifolium pratense
unitig_32.g10899 Utricularia gibba
vmacro00276 Vaccinium macrocarpon
vmacro00277 Vaccinium macrocarpon
VMungo1215G0394 Vigna mungo
Zm00001eb025080 Zea mays
Zm00001eb224960 Zea mays

User provided reference genes

Program Settings