Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p02070 Brassica napus
A09p49580 Brassica napus
Aa31LG10G11580 Aethionema arabicum
Aa31LG3G900 Aethionema arabicum
Aa31LG3G910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4495 Anthoceros agrestis
Actinidia06430 Actinidia chinensis
Actinidia22259 Actinidia chinensis
AL4G39130 Arabidopsis lyrata
AL5G38100 Arabidopsis lyrata
Aqoxy2G00434 Aquilegia oxysepala
Aqoxy2G02076 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5HY1FK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CJ2XLM Arachis hypogaea
AT2G41160 Arabidopsis thaliana
AT3G56740 Arabidopsis thaliana
ATR0307G082 Amborella trichopoda
Atru.chr1.1396 Acer truncatum
AUR62018357 Chenopodium quinoa
AUR62030305 Chenopodium quinoa
BcaC02g12756 Brassica carinata
BcaC07g39982 Brassica carinata
BcaC07g40121 Brassica carinata
BolC4t21891H Brassica oleracea
BolC4t21949H Brassica oleracea
BolC8t50814H Brassica oleracea
BraA05t19203Z Brassica rapa
BraA09t40411Z Brassica rapa
C04p02460 Brassica napus
C04p03070 Brassica napus
C08p31960 Brassica napus
CAN.G128.73 Capsicum annuum
CANSAT64G1638 Cannabis sativa
CARHR136250 Cardamine hirsuta
CARHR166870 Cardamine hirsuta
Carub.0004s2347 Capsella rubella
Carub.0005s2348 Capsella rubella
CBR_g11167 Chara braunii
CBR_g18715 Chara braunii
Cc06_g19630 Coffea canephora
CDE08G0004 Ceratophyllum demersum
CDE08G0582 Ceratophyllum demersum
Cfa019996 Carpinus fangiana
Ciclev10012184m.g Citrus clementina
CiPaw.09G048700 Carya illinoinensis
CiPaw.10G040700 Carya illinoinensis
ClCG10G013700 Citrullus lanatus
COL.COLO4_07077 Corchorus olitorius
Cpa.g.sc92.78 Carica papaya
Cre08.g386050 Chlamydomonas reinhardtii
CsaV3_3G042950 Cucumis sativus L.
CSS0002759 Camellia sinensis var. sinensis
CSS0023469 Camellia sinensis var. sinensis
DCAR_020579 Daucus carota
Dinv03206 Davidia involucrata
Dinv05308 Davidia involucrata
Dinv05720 Davidia involucrata
Duzib106G1523 Durio zibethinus
Duzib128G0186 Durio zibethinus
ECA247G2040 Erigeron canadensis
EL10Ac3g07249 Beta vulgaris
Eucgr.A02232 Eucalyptus grandis
Eucgr.K01645 Eucalyptus grandis
FAN02G0789 Fragaria x ananassa
FAN02G2919 Fragaria x ananassa
FAN05G1433 Fragaria x ananassa
FAN09G3120 Fragaria x ananassa
FvH4_6g25340 Fragaria vesca
Glyma.03G126400 Glycine max
Glyma.19G129500 Glycine max
Gohir.A13G002100 Gossypium hirsutum
Gohir.D13G001500 Gossypium hirsutum
Gorai.013G001400 Gossypium raimondii
GSVIVG01025741001 Vitis vinifera
HanXRQChr10g0292841 Helianthus annuus
Hma1.2p1_0252F.1_g102810 Hydrangea macrophylla
HPP92_001027 Vanilla planifolia
HPP92_018980 Vanilla planifolia
Hund19087 Selenicereus undatus
Hund24582 Selenicereus undatus
Lalb_Chr14g0365751 Lupinus albus
Lalb_Chr24g0400371 Lupinus albus
Lj1A1090G38 Lonicera japonica
Lj1g0025115 Lotus japonicus
Lj2A402T37 Lonicera japonica
Lsat_1_v5_gn_9_30021 Lactuca sativa
Manes.09G003700 Manihot esculenta
Mapoly0023s0107 Marchantia polymorpha
MBI13_g09215_MAGBIO Magnolia biondii
MBI19_g14619_MAGBIO Magnolia biondii
MBI19_g45264_MAGBIO Magnolia biondii
MCO13G544 Micromonas commoda
MD12G1096200 Malus domestica
MD14G1089500 Malus domestica
Medtr7g089550 Medicago truncatula
MELO3C026597.2 Cucumis melo
Migut.J01644 Erythranthe guttata
MSTRG.19796 Avicennia marina
MSTRG.5996 Avicennia marina
Nitab4.5_0001173g0020 Nicotiana tabacum
Nn7g36811 Nelumbo nucifera
Oeu022968.1 Olea europaea
Oeu063781.2 Olea europaea
Os01g0268800 Oryza sativa ssp. japonica
Os01g0806000 Oryza sativa ssp. japonica
Peaxi162Scf00076g00330 Petunia axillaris
Peaxi162Scf00696g00027 Petunia axillaris
PGR031G0872 Punica granatum
PGSC0003DMG400010553 Solanum tuberosum
PGSC0003DMG400012448 Solanum tuberosum
PGSC0003DMG400023695 Solanum tuberosum
Phvul.001G121800 Phaseolus vulgaris
Potri.006G040100 Populus trichocarpa
Potri.016G035800 Populus trichocarpa
Pp3c15_13440 Physcomitrium patens
Pp3c26_11360 Physcomitrium patens
Pp3c9_17200 Physcomitrium patens
Prupe.7G034400 Prunus persica
Psat3g079720 Pisum sativum
Psat3g079760 Pisum sativum
PSO339G3176 Papaver somniferum
PSO384G3583 Papaver somniferum
QL07p011297 Quercus lobata
RcHm_v2.0_Chr2g0125741 Rosa chinensis
Rhsim07G0181600 Rhododendron simsii
Sabra06G0027100 Salix brachista
Sc13g0001070 Simmondsia chinensis
Sed0000448 Sechium edule
Sed0017951 Sechium edule
SEGI_18914 Sequoiadendron giganteum
SEGI_26369 Sequoiadendron giganteum
SEGI_36601 Sequoiadendron giganteum
SEGI_39448 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22264 Striga asiatica
SGA_v2.0_scaffold66G22363 Striga asiatica
SGA_v2.0_scaffold69G23161 Striga asiatica
SHI48963 Sapria himalayana
SMO364G0164 Selaginella moellendorffii
Solyc10g080810.2 Solanum lycopersicum
Sopen10g031320 Solanum pennellii
Sp4g23460 Schrenkiella parvula
Sp5g05830 Schrenkiella parvula
TAR369G0459 Trochodendron aralioides
TAR623G1611 Trochodendron aralioides
THA.LOC104803258 Tarenaya hassleriana
THA.LOC104824396 Tarenaya hassleriana
Thecc.05G127700 Theobroma cacao
Thhalv10006131m.g Eutrema salsugineum
Thhalv10017035m.g Eutrema salsugineum
TPR.G27640 Trifolium pratense
TWI53G0703 Tripterygium wilfordii
TWI74G1405 Tripterygium wilfordii
TWI77G0289 Tripterygium wilfordii
unitig_21.g20688 Utricularia gibba
unitig_744.g24180 Utricularia gibba
vmacro05025 Vaccinium macrocarpon
VMungo1383G1992 Vigna mungo
Zm00001eb128690 Zea mays
Zm00001eb150410 Zea mays

User provided reference genes

Program Settings