Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p29560 Brassica napus
A09p27030 Brassica napus
Aa31LG11G5140 Aethionema arabicum
Aa31LG11G5170 Aethionema arabicum
Aa31LG9G10340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis
Actinidia27434 Actinidia chinensis
Ah.12g058230 Amaranthus hybridus
AL6G47050 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea
AT4G12130 Arabidopsis thaliana
ATR0757G012 Amborella trichopoda
Atru.chr9.1431 Acer truncatum
AUR62010510 Chenopodium quinoa
AUR62017391 Chenopodium quinoa
BcaB01g01727 Brassica carinata
BcaB01g02657 Brassica carinata
BcaC01g04604 Brassica carinata
BcaC04g21205 Brassica carinata
BcaC06g34436 Brassica carinata
BcaC06g34438 Brassica carinata
BcaC06g35234 Brassica carinata
BolC3t15891H Brassica oleracea
BolC3t15892H Brassica oleracea
BolC3t15893H Brassica oleracea
BolC6t40022H Brassica oleracea
BolC7t43385H Brassica oleracea
BolC7t43387H Brassica oleracea
BolC9t56277H Brassica oleracea
BraA03t12150Z Brassica rapa
BraA09t38274Z Brassica rapa
C03p35810 Brassica napus
C03p35830 Brassica napus
C07p28450 Brassica napus
C07p28470 Brassica napus
C09p34340 Brassica napus
CAN.G630.82 Capsicum annuum
CANSAT21G2188 Cannabis sativa
CARHR254050 Cardamine hirsuta
Carub.0006s3132 Capsella rubella
Ca_16218_v3 Cicer arietinum L.
CBR_g46688 Chara braunii
Cc08_g13230 Coffea canephora
CDE04G2826 Ceratophyllum demersum
CDE04G3100 Ceratophyllum demersum
Cfa023844 Carpinus fangiana
Ciclev10020216m.g Citrus clementina
CiPaw.11G147500 Carya illinoinensis
CiPaw.12G105000 Carya illinoinensis
ClCG10G003140 Citrullus lanatus
COL.COLO4_23880 Corchorus olitorius
Cpa.g.sc29.91 Carica papaya
Cre10.g459000 Chlamydomonas reinhardtii
CsaV3_3G003200 Cucumis sativus L.
CSS0024785 Camellia sinensis var. sinensis
CSS0027133 Camellia sinensis var. sinensis
CSS0042805 Camellia sinensis var. sinensis
Dinv37763 Davidia involucrata
Dinv39078 Davidia involucrata
Duzib084G0179 Durio zibethinus
Duzib205G1463 Durio zibethinus
ECA234G2416 Erigeron canadensis
ECA246G1898 Erigeron canadensis
EL10Ac5g12616 Beta vulgaris
Eucgr.D01989 Eucalyptus grandis
Eucgr.D02019 Eucalyptus grandis
FAN04G0404 Fragaria x ananassa
FAN08G3098 Fragaria x ananassa
FAN13G3174 Fragaria x ananassa
FAN18G1402 Fragaria x ananassa
FvH4_5g00670 Fragaria vesca
Glyma.01G212000 Glycine max
Glyma.11G029800 Glycine max
Gohir.A03G011900 Gossypium hirsutum
Gohir.A12G221000 Gossypium hirsutum
Gohir.D03G157900 Gossypium hirsutum
Gohir.D12G223300 Gossypium hirsutum
Gorai.003G166400 Gossypium raimondii
Gorai.008G239600 Gossypium raimondii
GSVIVG01004911001 Vitis vinifera
HanXRQChr17g0549071 Helianthus annuus
Haze_02980 Corylus avellana
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla
HPP92_014947 Vanilla planifolia
HPP92_014982 Vanilla planifolia
Hund14651 Selenicereus undatus
Lalb_Chr25g0283101 Lupinus albus
Lj2g0024595 Lotus japonicus
Lj4g0011407 Lotus japonicus
Lj8C255T7 Lonicera japonica
Lsat_1_v5_gn_3_3920 Lactuca sativa
Lsat_1_v5_gn_3_76480 Lactuca sativa
Manes.01G073700 Manihot esculenta
Mapoly0014s0047 Marchantia polymorpha
MBI04_g30221_MAGBIO Magnolia biondii
MCO07G558 Micromonas commoda
MD04G1079500 Malus domestica
Medtr3g078637 Medicago truncatula
MELO3C013985.2 Cucumis melo
MELO3C021762.2 Cucumis melo
Migut.A00834 Erythranthe guttata
MSTRG.12061 Avicennia marina
Nitab4.5_0003534g0110 Nicotiana tabacum
Nitab4.5_0005465g0020 Nicotiana tabacum
Nitab4.5_0007591g0010 Nicotiana tabacum
Nn2g12338 Nelumbo nucifera
Nn8g40647 Nelumbo nucifera
Oeu016511.2 Olea europaea
Oeu022318.1 Olea europaea
Os06g0134800 Oryza sativa ssp. japonica
Peaxi162Scf00271g00023 Petunia axillaris
PGR031G2216 Punica granatum
PGSC0003DMG400003935 Solanum tuberosum
Phvul.002G060100 Phaseolus vulgaris
Potri.001G117700 Populus trichocarpa
Pp3c14_15790 Physcomitrium patens
Pp3c2_10920 Physcomitrium patens
PRCOL_00001266 Prasinoderma coloniale
PRCOL_00002067 Prasinoderma coloniale
Prupe.5G079500 Prunus persica
Psat1g081320 Pisum sativum
Psat5g109880 Pisum sativum
PSO017G0573 Papaver somniferum
PSO478G4546 Papaver somniferum
PSO782G0229 Papaver somniferum
QL12p014971 Quercus lobata
RcHm_v2.0_Chr4g0419741 Rosa chinensis
RcHm_v2.0_Chr7g0201591 Rosa chinensis
Rhsim07G0101600 Rhododendron simsii
Sabra01G0090400 Salix brachista
SalBow5G2183 Salvia bowleyana
SalBow5G3960 Salvia bowleyana
Sc07g0009440 Simmondsia chinensis
Sed0020035 Sechium edule
SEGI_30484 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32815 Striga asiatica
SGA_v2.0_scaffold146G36178 Striga asiatica
SGA_v2.0_scaffold25G11118 Striga asiatica
SMO165G0061 Selaginella moellendorffii
SMO230G0075 Selaginella moellendorffii
Solyc08g079470.3 Solanum lycopersicum
Sopen08g027840 Solanum pennellii
Sp6g05370 Schrenkiella parvula
TAR374G1167 Trochodendron aralioides
Thecc.03G261800 Theobroma cacao
Thhalv10028714m.g Eutrema salsugineum
TPR.G214 Trifolium pratense
TWI60G0362 Tripterygium wilfordii
TWI81G0341 Tripterygium wilfordii
unitig_8.g3903 Utricularia gibba
vmacro14042 Vaccinium macrocarpon
vmacro17466 Vaccinium macrocarpon
VMungo1215G0237 Vigna mungo
VMungo1215G1224 Vigna mungo
VMungo1215G2974 Vigna mungo
Zm00001eb377920 Zea mays

User provided reference genes

Program Settings