Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07760 Brassica napus
A08p19250 Brassica napus
A10p15150 Brassica napus
Aa31LG2G20120 Aethionema arabicum
AL7G21740 Arabidopsis lyrata
AL8G33810 Arabidopsis lyrata
Aqoxy7G03243 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.40EERC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZ4SGF Arachis hypogaea
AT4G30410 Arabidopsis thaliana
AT5G57780 Arabidopsis thaliana
ATR0580G302 Amborella trichopoda
Atru.chr7.491 Acer truncatum
AUR62028409 Chenopodium quinoa
AUR62039753 Chenopodium quinoa
BcaB01g04486 Brassica carinata
BcaB03g12646 Brassica carinata
BcaB03g12647 Brassica carinata
BcaB08g36143 Brassica carinata
BcaC01g01152 Brassica carinata
BcaC04g19929 Brassica carinata
BcaC09g51830 Brassica carinata
BcaNung02991 Brassica carinata
BolC1t00847H Brassica oleracea
BolC3t13923H Brassica oleracea
BolC3t21183H Brassica oleracea
BolC9t57818H Brassica oleracea
BraA01t00720Z Brassica rapa
BraA08t33886Z Brassica rapa
BraA10t43598Z Brassica rapa
C01p08650 Brassica napus
C03p14810 Brassica napus
C03p88720 Brassica napus
C09p49660 Brassica napus
CANSAT11G0203 Cannabis sativa
CARHR238310 Cardamine hirsuta
CARHR271510 Cardamine hirsuta
Carub.0007s1019 Capsella rubella
Carub.0008s1829 Capsella rubella
Ca_21181_v3 Cicer arietinum L.
Cc06_g14060 Coffea canephora
CDE02G1288 Ceratophyllum demersum
CDE05G1486 Ceratophyllum demersum
Cfa013550 Carpinus fangiana
Ciclev10009640m.g Citrus clementina
CiPaw.07G186500 Carya illinoinensis
CiPaw.08G040400 Carya illinoinensis
ClCG06G012890 Citrullus lanatus
ClCG11G012600 Citrullus lanatus
COL.COLO4_24287 Corchorus olitorius
Cpa.g.sc75.20 Carica papaya
CsaV3_1G029460 Cucumis sativus L.
CsaV3_2G007890 Cucumis sativus L.
CSS0033256 Camellia sinensis var. sinensis
DCAR_017942 Daucus carota
Dinv41307 Davidia involucrata
Dinv42787 Davidia involucrata
Dinv43314 Davidia involucrata
Duzib150G1659 Durio zibethinus
Duzib168G0769 Durio zibethinus
Duzib187G0534 Durio zibethinus
ECA234G3792 Erigeron canadensis
ECA240G1410 Erigeron canadensis
EL10Ac8g18870 Beta vulgaris
Eucgr.C00212 Eucalyptus grandis
Glyma.13G091500 Glycine max
Glyma.17G068800 Glycine max
Gohir.A08G235500 Gossypium hirsutum
Gohir.D08G097200 Gossypium hirsutum
Gohir.D08G255900 Gossypium hirsutum
Gorai.004G104000 Gossypium raimondii
Gorai.004G273100 Gossypium raimondii
GSVIVG01023743001 Vitis vinifera
HanXRQChr03g0066301 Helianthus annuus
HanXRQChr09g0245171 Helianthus annuus
HanXRQChr10g0306471 Helianthus annuus
HanXRQChr12g0358031 Helianthus annuus
Haze_22171 Corylus avellana
Hma1.2p1_0156F.1_g068730 Hydrangea macrophylla
HPP92_015856 Vanilla planifolia
Lalb_Chr07g0180071 Lupinus albus
Lalb_Chr12g0199041 Lupinus albus
Lalb_Chr13g0300541 Lupinus albus
Lj4g0026981 Lotus japonicus
Lsat_1_v5_gn_5_87560 Lactuca sativa
Lsat_1_v5_gn_7_51920 Lactuca sativa
Lsat_1_v5_gn_8_64381 Lactuca sativa
Manes.14G147700 Manihot esculenta
MBI14_g08083_MAGBIO Magnolia biondii
MBI15_g25682_MAGBIO Magnolia biondii
MBI15_g34420_MAGBIO Magnolia biondii
MD13G1260000 Malus domestica
MD16G1262200 Malus domestica
Medtr4g129560 Medicago truncatula
MELO3C004096.2 Cucumis melo
MELO3C010170.2 Cucumis melo
Migut.K00276 Erythranthe guttata
MSTRG.10721 Avicennia marina
MSTRG.19674 Avicennia marina
MSTRG.6179 Avicennia marina
Nitab4.5_0001427g0130 Nicotiana tabacum
Nitab4.5_0002587g0090 Nicotiana tabacum
Nitab4.5_0007380g0020 Nicotiana tabacum
Nn2g12545 Nelumbo nucifera
Nn8g40236 Nelumbo nucifera
Oeu031854.1 Olea europaea
Oeu045661.2 Olea europaea
Os02g0178700 Oryza sativa ssp. japonica
Os02g0791300 Oryza sativa ssp. japonica
Os06g0653200 Oryza sativa ssp. japonica
Peaxi162Scf00525g00089 Petunia axillaris
PGR142G2563 Punica granatum
PGSC0003DMG400011171 Solanum tuberosum
Phvul.003G151300 Phaseolus vulgaris
Potri.006G177000 Populus trichocarpa
Potri.018G099100 Populus trichocarpa
Prupe.1G097600 Prunus persica
Psat0s1742g0040 Pisum sativum
PSO782G3560 Papaver somniferum
QL02p095594 Quercus lobata
Rhsim01G0012400 Rhododendron simsii
Sabra06G0135200 Salix brachista
Sabra18G0085600 Salix brachista
SalBow1G3357 Salvia bowleyana
Sed0006958 Sechium edule
Sed0015365 Sechium edule
Sed0016375 Sechium edule
Sed0016542 Sechium edule
SEGI_39312 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22517 Striga asiatica
SGA_v2.0_scaffold69G23313 Striga asiatica
SHI24757 Sapria himalayana
SHI26083 Sapria himalayana
SHI49167 Sapria himalayana
Solyc07g006310.1 Solanum lycopersicum
Sopen07g002400 Solanum pennellii
Sp6g19460 Schrenkiella parvula
Sp7g28290 Schrenkiella parvula
TAR383G0901 Trochodendron aralioides
TAR625G0362 Trochodendron aralioides
TAR626G0275 Trochodendron aralioides
TAR636G1916 Trochodendron aralioides
THA.LOC104803518 Tarenaya hassleriana
THA.LOC104803927 Tarenaya hassleriana
THA.LOC104817812 Tarenaya hassleriana
THA.LOC104819987 Tarenaya hassleriana
Thecc.09G160500 Theobroma cacao
Thhalv10014877m.g Eutrema salsugineum
Thhalv10026358m.g Eutrema salsugineum
TPR.G5348 Trifolium pratense
TWI32G0773 Tripterygium wilfordii
TWI34G1692 Tripterygium wilfordii
unitig_37.g12687 Utricularia gibba
unitig_62.g23492 Utricularia gibba
VMungo1215G3417 Vigna mungo
Zm00001eb178020 Zea mays
Zm00001eb192600 Zea mays
Zm00001eb233860 Zea mays
Zm00001eb389070 Zea mays
Zm00001eb412560 Zea mays

User provided reference genes

Program Settings