Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p27570 Brassica napus
Aa31LG9G12800 Aethionema arabicum
AL8G18380 Arabidopsis lyrata
Aqoxy5G01252 Aquilegia oxysepala
Aqoxy6G01353 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2LG1YU Arachis hypogaea
AT5G42750 Arabidopsis thaliana
ATR0100G018 Amborella trichopoda
Atru.chr13.656 Acer truncatum
AUR62022419 Chenopodium quinoa
AUR62042173 Chenopodium quinoa
BcaB07g30603 Brassica carinata
BcaC03g16510 Brassica carinata
BolC2t10378H Brassica oleracea
BraA02t07790Z Brassica rapa
C02p43260 Brassica napus
CAN.G371.30 Capsicum annuum
CARHR181660 Cardamine hirsuta
Carub.0008s0620 Capsella rubella
Cc10_g04260 Coffea canephora
CDE02G0300 Ceratophyllum demersum
CDE02G3707 Ceratophyllum demersum
CDE06G1443 Ceratophyllum demersum
CDE09G0998 Ceratophyllum demersum
CDE09G1057 Ceratophyllum demersum
Cfa018531 Carpinus fangiana
Ciclev10001740m.g Citrus clementina
CiPaw.15G061000 Carya illinoinensis
CiPaw.16G045400 Carya illinoinensis
ClCG05G019780 Citrullus lanatus
ClCG08G015770 Citrullus lanatus
COL.COLO4_26483 Corchorus olitorius
Cpa.g.sc49.5 Carica papaya
CsaV3_2G027990 Cucumis sativus L.
CsaV3_4G034230 Cucumis sativus L.
DCAR_012769 Daucus carota
DCAR_019457 Daucus carota
Dinv35969 Davidia involucrata
Dinv39324 Davidia involucrata
Duzib041G0178 Durio zibethinus
Duzib093G0589 Durio zibethinus
Duzib116G0149 Durio zibethinus
EL10Ac1g01723 Beta vulgaris
Eucgr.F00237 Eucalyptus grandis
Eucgr.F02356 Eucalyptus grandis
FAN15G1553 Fragaria x ananassa
FAN20G0303 Fragaria x ananassa
FAN27G0025 Fragaria x ananassa
FvH4_2g34560 Fragaria vesca
Glyma.04G038100 Glycine max
Glyma.06G039100 Glycine max
Glyma.14G082300 Glycine max
Glyma.17G243000 Glycine max
Gohir.A01G119100 Gossypium hirsutum
Gohir.A05G201800 Gossypium hirsutum
Gohir.A06G017400 Gossypium hirsutum
Gohir.D01G107300 Gossypium hirsutum
Gohir.D05G204900 Gossypium hirsutum
Gohir.D06G015500 Gossypium hirsutum
Gorai.002G131700 Gossypium raimondii
Gorai.009G211200 Gossypium raimondii
Gorai.010G018300 Gossypium raimondii
GSVIVG01009517001 Vitis vinifera
HanXRQChr09g0267891 Helianthus annuus
HanXRQChr16g0507531 Helianthus annuus
Haze_17534 Corylus avellana
Haze_17537 Corylus avellana
Hma1.2p1_0718F.1_g208360 Hydrangea macrophylla
Hma1.2p1_0982F.1_g243930 Hydrangea macrophylla
HPP92_016728 Vanilla planifolia
Lalb_Chr22g0355171 Lupinus albus
Lalb_Chr23g0267021 Lupinus albus
Lalb_Chr24g0399251 Lupinus albus
Lj1g0007502 Lotus japonicus
Lj4P54T34 Lonicera japonica
Lj4P774T14 Lonicera japonica
Lj5g0012770 Lotus japonicus
Lsat_1_v5_gn_4_125561 Lactuca sativa
Lsat_1_v5_gn_6_114061 Lactuca sativa
Manes.05G172300 Manihot esculenta
Manes.18G035600 Manihot esculenta
MBI02_g02958_MAGBIO Magnolia biondii
MBI02_g17324_MAGBIO Magnolia biondii
MBI06_g24649_MAGBIO Magnolia biondii
MD08G1102600 Malus domestica
MD15G1084100 Malus domestica
Medtr1g019750 Medicago truncatula
Medtr3g101560 Medicago truncatula
MELO3C010878.2 Cucumis melo
MELO3C016744.2 Cucumis melo
Migut.N02706 Erythranthe guttata
MSTRG.1340 Avicennia marina
MSTRG.22265 Avicennia marina
MSTRG.24329 Avicennia marina
Nitab4.5_0001580g0010 Nicotiana tabacum
Nitab4.5_0007986g0010 Nicotiana tabacum
Nn1g04891 Nelumbo nucifera
Oeu011539.1 Olea europaea
Oeu011558.1 Olea europaea
Oeu029881.1 Olea europaea
Oeu044838.1 Olea europaea
Oeu057287.1 Olea europaea
Os08g0474500 Oryza sativa ssp. japonica
Os09g0459500 Oryza sativa ssp. japonica
Peaxi162Scf00064g00008 Petunia axillaris
Peaxi162Scf00252g00123 Petunia axillaris
PGR031G2315 Punica granatum
PGR083G0364 Punica granatum
PGSC0003DMG400008020 Solanum tuberosum
PGSC0003DMG400015442 Solanum tuberosum
Phvul.001G021300 Phaseolus vulgaris
Phvul.009G064300 Phaseolus vulgaris
Potri.002G127100 Populus trichocarpa
Potri.014G031100 Populus trichocarpa
Prupe.1G437500 Prunus persica
Psat6g012120 Pisum sativum
PSO170G6689 Papaver somniferum
PSO210G2137 Papaver somniferum
PSO541G3526 Papaver somniferum
PSO675G2195 Papaver somniferum
QL02p005285 Quercus lobata
RcHm_v2.0_Chr6g0307601 Rosa chinensis
RcHm_v2.0_Chr6g0307761 Rosa chinensis
Rhsim06G0048600 Rhododendron simsii
Sabra02G0099600 Salix brachista
Sabra14G0022100 Salix brachista
SalBow2G2132 Salvia bowleyana
SalBow7G1688 Salvia bowleyana
Sc15g0006190 Simmondsia chinensis
Sc15g0006270 Simmondsia chinensis
Sed0004281 Sechium edule
Sed0018137 Sechium edule
Sed0026223 Sechium edule
Sed0027328 Sechium edule
SGA_v2.0_scaffold14G07036 Striga asiatica
SGA_v2.0_scaffold208G41968 Striga asiatica
SHI08291 Sapria himalayana
Solyc04g079110.1 Solanum lycopersicum
Sopen04g032720 Solanum pennellii
Sopen12g030760 Solanum pennellii
Sp2g07370 Schrenkiella parvula
TAR381G0791 Trochodendron aralioides
TAR625G1455 Trochodendron aralioides
THA.LOC104804561 Tarenaya hassleriana
THA.LOC104806943 Tarenaya hassleriana
THA.LOC109116829 Tarenaya hassleriana
Thecc.08G010300 Theobroma cacao
Thhalv10003420m.g Eutrema salsugineum
TPR.G17544 Trifolium pratense
TPR.G28115 Trifolium pratense
TWI36G0121 Tripterygium wilfordii
TWI36G0477 Tripterygium wilfordii
unitig_26.g10024 Utricularia gibba
unitig_744.g24589 Utricularia gibba
unitig_749.g13680 Utricularia gibba
unitig_899.g15623 Utricularia gibba
VMungo0647G0958 Vigna mungo
VMungo1309G0174 Vigna mungo
Zm00001eb038100 Zea mays
Zm00001eb315000 Zea mays

User provided reference genes

Program Settings