Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p34250 Brassica napus
A05p06020 Brassica napus
Aa31LG1G27460 Aethionema arabicum
Actinidia14191 Actinidia chinensis
Actinidia20888 Actinidia chinensis
Ah.05g180370 Amaranthus hybridus
AL4G45280 Arabidopsis lyrata
Aqoxy7G00260 Aquilegia oxysepala
Aqoxy7G00261 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.04AGHE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0GN1Z3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C1BLFK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R57FTB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V8X9PU Arachis hypogaea
AT2G46060 Arabidopsis thaliana
ATR0680G297 Amborella trichopoda
Atru.chr5.526 Acer truncatum
AUR62004387 Chenopodium quinoa
AUR62010714 Chenopodium quinoa
AUR62022593 Chenopodium quinoa
BolC4t22316H Brassica oleracea
BraA04t18886Z Brassica rapa
BraA05t19565Z Brassica rapa
C04p06950 Brassica napus
C04p72070 Brassica napus
CAN.G78.100 Capsicum annuum
CANSAT56G0477 Cannabis sativa
CARHR141310 Cardamine hirsuta
Carub.0004s2875 Capsella rubella
Ca_00829_v3 Cicer arietinum L.
Ca_23605_v3 Cicer arietinum L.
CBR_g17143 Chara braunii
CBR_g17145 Chara braunii
Cc02_g38300 Coffea canephora
Cc08_g14990 Coffea canephora
CDE06G0272 Ceratophyllum demersum
CDE06G0820 Ceratophyllum demersum
Cfa003897 Carpinus fangiana
Ciclev10018851m.g Citrus clementina
CiPaw.01G063800 Carya illinoinensis
ClCG06G003550 Citrullus lanatus
COL.COLO4_12736 Corchorus olitorius
COL.COLO4_28934 Corchorus olitorius
COL.COLO4_34496 Corchorus olitorius
Cpa.g.sc11.33 Carica papaya
CsaV3_6G000710 Cucumis sativus L.
CSS0020518 Camellia sinensis var. sinensis
DCAR_008618 Daucus carota
Dinv32500 Davidia involucrata
Duzib133G0971 Durio zibethinus
Duzib138G1080 Durio zibethinus
ECA234G4483 Erigeron canadensis
ECA236G0795 Erigeron canadensis
EL10Ac1g00390 Beta vulgaris
Eucgr.E00113 Eucalyptus grandis
FAN01G2073 Fragaria x ananassa
FAN03G0719 Fragaria x ananassa
FAN06G0667 Fragaria x ananassa
FAN06G1095 Fragaria x ananassa
FAN10G2351 Fragaria x ananassa
FAN10G2492 Fragaria x ananassa
FvH4_7g14850 Fragaria vesca
Glyma.07G068700 Glycine max
Glyma.09G257000 Glycine max
Glyma.16G034476 Glycine max
Glyma.16G034551 Glycine max
Glyma.18G235400 Glycine max
Gohir.A08G131800 Gossypium hirsutum
Gohir.A08G131900 Gossypium hirsutum
Gohir.A11G090500 Gossypium hirsutum
Gohir.D08G153200 Gossypium hirsutum
Gohir.D11G095000 Gossypium hirsutum
Gorai.004G159100 Gossypium raimondii
Gorai.007G101400 Gossypium raimondii
GSVIVG01027000001 Vitis vinifera
HanXRQChr06g0170231 Helianthus annuus
HanXRQChr17g0562371 Helianthus annuus
Haze_08811 Corylus avellana
Haze_15535 Corylus avellana
Hma1.2p1_0071F.1_g037745 Hydrangea macrophylla
HPP92_022633 Vanilla planifolia
Hund14837 Selenicereus undatus
Hund14838 Selenicereus undatus
Hund14845 Selenicereus undatus
Hund14846 Selenicereus undatus
Hund16660 Selenicereus undatus
Lalb_Chr17g0339421 Lupinus albus
Lj3g0021790 Lotus japonicus
Lj9C585G14 Lonicera japonica
Lsat_1_v5_gn_4_34660 Lactuca sativa
Manes.01G254800 Manihot esculenta
Mapoly0035s0107 Marchantia polymorpha
MBI18_g32047_MAGBIO Magnolia biondii
MD01G1066200 Malus domestica
MD01G1067000 Malus domestica
MD01G1067200 Malus domestica
MD07G1133800 Malus domestica
Medtr8g028875 Medicago truncatula
MELO3C021197.2 Cucumis melo
MELO3C021198.2 Cucumis melo
MELO3C031211.2 Cucumis melo
MELO3C034807.2 Cucumis melo
Migut.B01778 Erythranthe guttata
MSTRG.17285 Avicennia marina
Nitab4.5_0000583g0350 Nicotiana tabacum
Nitab4.5_0010258g0020 Nicotiana tabacum
Nn1g01586 Nelumbo nucifera
Nn6g33342 Nelumbo nucifera
Oeu052960.2 Olea europaea
Os10g0446200 Oryza sativa ssp. japonica
Peaxi162Scf00020g01028 Petunia axillaris
PGR042G2088 Punica granatum
PGSC0003DMG400000181 Solanum tuberosum
Phvul.008G060500 Phaseolus vulgaris
Phvul.010G100800 Phaseolus vulgaris
Potri.014G087300 Populus trichocarpa
Pp3c10_11170 Physcomitrium patens
Pp3c14_25140 Physcomitrium patens
Prupe.2G173600 Prunus persica
Psat3g107400 Pisum sativum
Psat4g212960 Pisum sativum
PSO478G3176 Papaver somniferum
PSO782G3525 Papaver somniferum
QL04p054124 Quercus lobata
QL12p032431 Quercus lobata
RcHm_v2.0_Chr1g0356801 Rosa chinensis
Rhsim01G0146800 Rhododendron simsii
Rhsim07G0013000 Rhododendron simsii
Sabra14G0063300 Salix brachista
SalBow3G3684 Salvia bowleyana
Sc01g0003530 Simmondsia chinensis
Sed0001889 Sechium edule
Sed0014632 Sechium edule
SEGI_07374 Sequoiadendron giganteum
SEGI_31877 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28821 Striga asiatica
SHI13431 Sapria himalayana
SHI13432 Sapria himalayana
Solyc01g094860.4 Solanum lycopersicum
Sopen01g038640 Solanum pennellii
Sp4g28120 Schrenkiella parvula
TAR375G0606 Trochodendron aralioides
TAR629G1389 Trochodendron aralioides
THA.LOC104802040 Tarenaya hassleriana
Thecc.01G356300 Theobroma cacao
Thecc.03G282200 Theobroma cacao
Thhalv10001314m.g Eutrema salsugineum
TPR.G17909 Trifolium pratense
TPR.G24958 Trifolium pratense
TPR.G37813 Trifolium pratense
TWI23G1305 Tripterygium wilfordii
TWI60G0172 Tripterygium wilfordii
unitig_26.g9297 Utricularia gibba
unitig_26.g9298 Utricularia gibba
vmacro13259 Vaccinium macrocarpon
vmacro20915 Vaccinium macrocarpon
vmacro20916 Vaccinium macrocarpon
VMungo0331G1775 Vigna mungo
VMungo1383G3442 Vigna mungo
Zm00001eb222430 Zea mays

User provided reference genes

Program Settings