Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p29360 Brassica napus
Aa31LG3G18790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.318 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4951 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis
Actinidia13585 Actinidia chinensis
Actinidia24991 Actinidia chinensis
Ah.15g094140 Amaranthus hybridus
AL3G21620 Arabidopsis lyrata
AL6G17950 Arabidopsis lyrata
Aqoxy3G03912 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BI5KXL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XAT8RN Arachis hypogaea
AT5G07630 Arabidopsis thaliana
ATR0745G086 Amborella trichopoda
Atru.chr1.817 Acer truncatum
AUR62009833 Chenopodium quinoa
AUR62038145 Chenopodium quinoa
BcaB05g21603 Brassica carinata
BcaC03g13193 Brassica carinata
BcaC06g32419 Brassica carinata
BcaC06g32495 Brassica carinata
BcaNung06188 Brassica carinata
BolC2t06286H Brassica oleracea
BolC9t59715H Brassica oleracea
BraA02t04927Z Brassica rapa
BraA10t44979Z Brassica rapa
C02p03220 Brassica napus
C09p69720 Brassica napus
CAN.G937.4 Capsicum annuum
CARHR084780 Cardamine hirsuta
CARHR205520 Cardamine hirsuta
Carub.0003s0947 Capsella rubella
Carub.0006s0661 Capsella rubella
Ca_02786_v3 Cicer arietinum L.
Cc02_g04430 Coffea canephora
CDE02G4122 Ceratophyllum demersum
Cfa008145 Carpinus fangiana
Cfa025118 Carpinus fangiana
Ciclev10004737m.g Citrus clementina
CiPaw.03G020300 Carya illinoinensis
CiPaw.04G013200 Carya illinoinensis
ClCG07G016840 Citrullus lanatus
COL.COLO4_14097 Corchorus olitorius
Cre11.g467726 Chlamydomonas reinhardtii
CsaV3_4G004040 Cucumis sativus L.
CSS0021260 Camellia sinensis var. sinensis
CSS0021614 Camellia sinensis var. sinensis
CSS0024530 Camellia sinensis var. sinensis
CSS0042388 Camellia sinensis var. sinensis
DCAR_009449 Daucus carota
Dinv06575 Davidia involucrata
Dinv16848 Davidia involucrata
Duzib084G1021 Durio zibethinus
ECA233G4878 Erigeron canadensis
ECA234G2767 Erigeron canadensis
ECA238G4811 Erigeron canadensis
EL10Ac7g16351 Beta vulgaris
Eucgr.G03077 Eucalyptus grandis
FAN11G1420 Fragaria x ananassa
FAN16G2392 Fragaria x ananassa
FAN21G3639 Fragaria x ananassa
FAN25G1514 Fragaria x ananassa
FvH4_1g27600 Fragaria vesca
FvH4_3g41750 Fragaria vesca
Glyma.09G230400 Glycine max
Glyma.12G006200 Glycine max
Gohir.A12G197600 Gossypium hirsutum
Gohir.D12G200100 Gossypium hirsutum
Gorai.008G215300 Gossypium raimondii
GSVIVG01014038001 Vitis vinifera
GSVIVG01037114001 Vitis vinifera
GSVIVG01037115001 Vitis vinifera
HanXRQChr05g0142551 Helianthus annuus
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla
HPP92_003455 Vanilla planifolia
Hund20838 Selenicereus undatus
Lalb_Chr04g0258171 Lupinus albus
Lj3g0015680 Lotus japonicus
Lj3g0020155 Lotus japonicus
Lj8A44G33 Lonicera japonica
Lsat_1_v5_gn_8_10281 Lactuca sativa
Manes.06G133200 Manihot esculenta
Manes.14G037200 Manihot esculenta
Mapoly0124s0016 Marchantia polymorpha
MCO14G174 Micromonas commoda
MD11G1042200 Malus domestica
Medtr4g036550 Medicago truncatula
MELO3C017661.2 Cucumis melo
Migut.A00970 Erythranthe guttata
Migut.D02110 Erythranthe guttata
Migut.G01103 Erythranthe guttata
Migut.G01109 Erythranthe guttata
Migut.G01144 Erythranthe guttata
Nitab4.5_0000818g0240 Nicotiana tabacum
Nitab4.5_0001187g0110 Nicotiana tabacum
Nitab4.5_0002764g0030 Nicotiana tabacum
Nitab4.5_0002764g0040 Nicotiana tabacum
Nitab4.5_0003647g0080 Nicotiana tabacum
Nitab4.5_0003647g0090 Nicotiana tabacum
Nn1g09635 Nelumbo nucifera
Nn1g09651 Nelumbo nucifera
Oeu022469.1 Olea europaea
Oeu042546.1 Olea europaea
Os07g0486100 Oryza sativa ssp. japonica
Peaxi162Scf00167g00733 Petunia axillaris
PGR119G0143 Punica granatum
PGR142G0681 Punica granatum
PGSC0003DMG401007235 Solanum tuberosum
PGSC0003DMG402007235 Solanum tuberosum
Phvul.011G007100 Phaseolus vulgaris
Potri.001G126200 Populus trichocarpa
Potri.003G107501 Populus trichocarpa
Pp3c18_8280 Physcomitrium patens
PRCOL_00001376 Prasinoderma coloniale
Prupe.6G033300 Prunus persica
Prupe.6G034800 Prunus persica
Prupe.6G034900 Prunus persica
Psat6g116600 Pisum sativum
Psat6g142360 Pisum sativum
PSO210G0611 Papaver somniferum
PSO210G1345 Papaver somniferum
QL09p005249 Quercus lobata
RcHm_v2.0_Chr5g0074831 Rosa chinensis
Rhsim03G0165600 Rhododendron simsii
Rhsim07G0010100 Rhododendron simsii
Rhsim07G0010200 Rhododendron simsii
Sabra01G0097300 Salix brachista
Sabra03G0074300 Salix brachista
SalBow7G0435 Salvia bowleyana
SalBow7G0508 Salvia bowleyana
SalBow8G0163 Salvia bowleyana
SalBow8G4260 Salvia bowleyana
Sc15g0000230 Simmondsia chinensis
Sed0003630 Sechium edule
SEGI_08016 Sequoiadendron giganteum
SEGI_20056 Sequoiadendron giganteum
SEGI_20600 Sequoiadendron giganteum
SEGI_28281 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32141 Striga asiatica
SGA_v2.0_scaffold4035G54420 Striga asiatica
SGA_v2.0_scaffold92G28289 Striga asiatica
SHI13988 Sapria himalayana
SMO200G0031 Selaginella moellendorffii
Solyc05g051630.4 Solanum lycopersicum
Sopen05g030080 Solanum pennellii
Sp6g35240 Schrenkiella parvula
TAR375G0984 Trochodendron aralioides
THA.LOC104819414 Tarenaya hassleriana
Thecc.03G153100 Theobroma cacao
Thhalv10013248m.g Eutrema salsugineum
TPR.G3665 Trifolium pratense
TWI23G0902 Tripterygium wilfordii
unitig_578.g16611 Utricularia gibba
vmacro22806 Vaccinium macrocarpon
vmacro22807 Vaccinium macrocarpon
Zm00001eb105090 Zea mays

User provided reference genes

Program Settings