Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p25140 Brassica napus
A09p36980 Brassica napus
Aa31LG6G6220 Aethionema arabicum
Actinidia19491 Actinidia chinensis
Actinidia25597 Actinidia chinensis
Ah.08g212900 Amaranthus hybridus
AL1G43130 Arabidopsis lyrata
Aqoxy5G03475 Aquilegia oxysepala
Aqoxy5G03495 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FTJQ4M Arachis hypogaea
AT1G29320 Arabidopsis thaliana
ATR0171G018 Amborella trichopoda
Atru.chr3.3406 Acer truncatum
AUR62025079 Chenopodium quinoa
AUR62025086 Chenopodium quinoa
AUR62025088 Chenopodium quinoa
AUR62025092 Chenopodium quinoa
AUR62025094 Chenopodium quinoa
AUR62025903 Chenopodium quinoa
AUR62029644 Chenopodium quinoa
AUR62032705 Chenopodium quinoa
BcaB03g12154 Brassica carinata
BcaB07g32523 Brassica carinata
BcaC01g00099 Brassica carinata
BcaC05g26958 Brassica carinata
BolC3t19835H Brassica oleracea
BolC4t25523H Brassica oleracea
BolC5t31537H Brassica oleracea
BraA08t34469Z Brassica rapa
BraA09t39216Z Brassica rapa
C03p75750 Brassica napus
C04p39580 Brassica napus
C05p28100 Brassica napus
CANSAT56G3508 Cannabis sativa
CARHR028640 Cardamine hirsuta
Carub.0001s2754 Capsella rubella
Ca_04603_v3 Cicer arietinum L.
Ca_09070_v3 Cicer arietinum L.
CBR_g31949 Chara braunii
Cc05_g04600 Coffea canephora
CDE08G0729 Ceratophyllum demersum
Cfa013402 Carpinus fangiana
Cfa014010 Carpinus fangiana
Ciclev10020238m.g Citrus clementina
CiPaw.05G140800 Carya illinoinensis
CiPaw.08G116800 Carya illinoinensis
CiPaw.11G010200 Carya illinoinensis
ClCG03G003620 Citrullus lanatus
COL.COLO4_28066 Corchorus olitorius
Cpa.g.sc166.23 Carica papaya
Cre17.g718650 Chlamydomonas reinhardtii
CsaV3_1G009480 Cucumis sativus L.
CSS0032894 Camellia sinensis var. sinensis
DCAR_012679 Daucus carota
Dinv04858 Davidia involucrata
Dinv11148 Davidia involucrata
Duzib068G0683 Durio zibethinus
Duzib205G0501 Durio zibethinus
ECA246G4485 Erigeron canadensis
EL10As4g23444 Beta vulgaris
Eucgr.C01065 Eucalyptus grandis
Eucgr.K00186 Eucalyptus grandis
FAN04G2053 Fragaria x ananassa
FAN08G0052 Fragaria x ananassa
FAN13G1359 Fragaria x ananassa
FAN18G2816 Fragaria x ananassa
FvH4_5g07760 Fragaria vesca
Glyma.07G068400 Glycine max
Glyma.16G034400 Glycine max
Gohir.A09G246200 Gossypium hirsutum
Gohir.A12G276900 Gossypium hirsutum
Gohir.D09G246800 Gossypium hirsutum
Gohir.D13G181701 Gossypium hirsutum
Gorai.006G271300 Gossypium raimondii
GSVIVG01013111001 Vitis vinifera
HanXRQChr05g0153981 Helianthus annuus
Haze_07247 Corylus avellana
HPP92_023861 Vanilla planifolia
Hund03342 Selenicereus undatus
Lalb_Chr03g0040831 Lupinus albus
Lj1g0020744 Lotus japonicus
Lj9A476T57 Lonicera japonica
Lj9A476T58 Lonicera japonica
Lsat_1_v5_gn_5_13520 Lactuca sativa
Manes.14G053800 Manihot esculenta
Mapoly0079s0016 Marchantia polymorpha
MBI11_g15865_MAGBIO Magnolia biondii
MCO03G018 Micromonas commoda
MD06G1147200 Malus domestica
MD14G1161100 Malus domestica
Medtr7g106650 Medicago truncatula
MELO3C002347.2 Cucumis melo
Migut.I00519 Erythranthe guttata
MSTRG.22910 Avicennia marina
Nitab4.5_0000264g0030 Nicotiana tabacum
Nitab4.5_0000903g0080 Nicotiana tabacum
Nitab4.5_0002978g0150 Nicotiana tabacum
Nitab4.5_0003013g0030 Nicotiana tabacum
Nn4g26409 Nelumbo nucifera
Oeu005018.3 Olea europaea
Oeu006698.1 Olea europaea
Os07g0506700 Oryza sativa ssp. japonica
Peaxi162Scf00078g00420 Petunia axillaris
Peaxi162Scf00078g00424 Petunia axillaris
PGR083G2085 Punica granatum
PGSC0003DMG400005828 Solanum tuberosum
Phvul.003G017500 Phaseolus vulgaris
Phvul.003G017700 Phaseolus vulgaris
Potri.012G095100 Populus trichocarpa
Potri.015G092400 Populus trichocarpa
Pp3c13_24500 Physcomitrium patens
PRCOL_00003967 Prasinoderma coloniale
Prupe.1G584300 Prunus persica
Psat3g028160 Pisum sativum
PSO063G4711 Papaver somniferum
PSO782G0077 Papaver somniferum
QL04p081834 Quercus lobata
QL07p000007 Quercus lobata
QL10p004476 Quercus lobata
QL93p0225_0015 Quercus lobata
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis
RcHm_v2.0_Chr3g0452771 Rosa chinensis
RcHm_v2.0_Chr3g0452851 Rosa chinensis
RcHm_v2.0_Chr5g0041021 Rosa chinensis
RcHm_v2.0_Chr7g0190661 Rosa chinensis
Rhsim08G0187300 Rhododendron simsii
Sabra12G0069700 Salix brachista
Sabra15G0114200 Salix brachista
SalBow5G0098 Salvia bowleyana
SalBow5G4825 Salvia bowleyana
SalBow8G1477 Salvia bowleyana
SalBow8G1815 Salvia bowleyana
Sc10g0010400 Simmondsia chinensis
Sed0003097 Sechium edule
Sed0020059 Sechium edule
SEGI_30468 Sequoiadendron giganteum
SGA_v2.0_scaffold215G42316 Striga asiatica
SHI10599 Sapria himalayana
SMO165G0173 Selaginella moellendorffii
Solyc08g008160.4 Solanum lycopersicum
Sopen08g004010 Solanum pennellii
Sp1g25270 Schrenkiella parvula
TAR371G1248 Trochodendron aralioides
TAR625G0069 Trochodendron aralioides
TAR629G1275 Trochodendron aralioides
THA.LOC104814264 Tarenaya hassleriana
THA.LOC104820611 Tarenaya hassleriana
Thecc.03G125300 Theobroma cacao
Thhalv10007651m.g Eutrema salsugineum
TPR.G34454 Trifolium pratense
TWI14G0260 Tripterygium wilfordii
TWI39G1139 Tripterygium wilfordii
unitig_699.g19657 Utricularia gibba
vmacro19222 Vaccinium macrocarpon
vmacro20468 Vaccinium macrocarpon
VMungo0331G1674 Vigna mungo
Zm00001eb105680 Zea mays
Zm00001eb322320 Zea mays

User provided reference genes

Program Settings