Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09620 Brassica napus
A10p12750 Brassica napus
Aa31LG1G14830 Aethionema arabicum
Aa31LG8G14680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2039 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1906 Anthoceros agrestis
Actinidia19235 Actinidia chinensis
Ah.02g124780 Amaranthus hybridus
Ah.05g171990 Amaranthus hybridus
AL5G14770 Arabidopsis lyrata
AL8G45190 Arabidopsis lyrata
Aqoxy6G02413 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ZKQR71 Arachis hypogaea
AT5G66330 Arabidopsis thaliana
ATR0661G385 Amborella trichopoda
Atru.chr3.756 Acer truncatum
AUR62007644 Chenopodium quinoa
AUR62007657 Chenopodium quinoa
AUR62014440 Chenopodium quinoa
AUR62015053 Chenopodium quinoa
AUR62034561 Chenopodium quinoa
BcaB05g22213 Brassica carinata
BcaB05g22215 Brassica carinata
BcaB08g35911 Brassica carinata
BolC2t07713H Brassica oleracea
BolC9t57489H Brassica oleracea
BraA02t06026Z Brassica rapa
BraA10t43367Z Brassica rapa
C02p16030 Brassica napus
C09p46250 Brassica napus
CAN.G358.9 Capsicum annuum
CAN.G851.16 Capsicum annuum
CANSAT01G0389 Cannabis sativa
CARHR281380 Cardamine hirsuta
Carub.0005s0395 Capsella rubella
Ca_24891_v3 Cicer arietinum L.
Cc07_g10330 Coffea canephora
Cfa006933 Carpinus fangiana
Ciclev10003978m.g Citrus clementina
Ciclev10025688m.g Citrus clementina
CiPaw.07G055000 Carya illinoinensis
ClCG07G008930 Citrullus lanatus
COL.COLO4_21977 Corchorus olitorius
COL.COLO4_26202 Corchorus olitorius
Cpa.g.sc6.204 Carica papaya
CsaV3_4G005270 Cucumis sativus L.
CSS0011622 Camellia sinensis var. sinensis
CSS0015951 Camellia sinensis var. sinensis
DCAR_021488 Daucus carota
Dinv33595 Davidia involucrata
Dinv40049 Davidia involucrata
Duzib116G0785 Durio zibethinus
Duzib147G1036 Durio zibethinus
Duzib264G0007 Durio zibethinus
ECA232G3045 Erigeron canadensis
EL10Ac1g00561 Beta vulgaris
EL10As8g23864 Beta vulgaris
Eucgr.F01616 Eucalyptus grandis
Eucgr.I02375 Eucalyptus grandis
FAN19G2547 Fragaria x ananassa
FAN23G3072 Fragaria x ananassa
FAN26G3171 Fragaria x ananassa
FAN28G0317 Fragaria x ananassa
FvH4_1g12241 Fragaria vesca
Glyma.01G169500 Glycine max
Glyma.02G051300 Glycine max
Glyma.11G073800 Glycine max
Gohir.A06G006300 Gossypium hirsutum
Gohir.A12G061500 Gossypium hirsutum
Gohir.D06G002200 Gossypium hirsutum
Gohir.D12G061600 Gossypium hirsutum
Gorai.008G064800 Gossypium raimondii
Gorai.010G006700 Gossypium raimondii
GSVIVG01009820001 Vitis vinifera
HanXRQChr09g0260791 Helianthus annuus
HanXRQChr11g0325661 Helianthus annuus
Haze_03817 Corylus avellana
Haze_22582 Corylus avellana
Hma1.2p1_0266F.1_g106970 Hydrangea macrophylla
Hma1.2p1_0773F.1_g216120 Hydrangea macrophylla
HPP92_022347 Vanilla planifolia
HPP92_022351 Vanilla planifolia
Lalb_Chr09g0322011 Lupinus albus
Lalb_Chr16g0377651 Lupinus albus
Lj2g0004262 Lotus japonicus
Lj4A213T43 Lonicera japonica
Lj4g0005839 Lotus japonicus
Lsat_1_v5_gn_4_152381 Lactuca sativa
Manes.01G142100 Manihot esculenta
Manes.02G100700 Manihot esculenta
Manes.05G152800 Manihot esculenta
MBI05_g20534_MAGBIO Magnolia biondii
MBI05_g20535_MAGBIO Magnolia biondii
MBI05_g33771_MAGBIO Magnolia biondii
MD02G1136300 Malus domestica
MD08G1048400 Malus domestica
MD09G1116000 Malus domestica
MD15G1250000 Malus domestica
Medtr5g021290 Medicago truncatula
MELO3C017541.2 Cucumis melo
Migut.H02488 Erythranthe guttata
Nitab4.5_0000587g0100 Nicotiana tabacum
Nitab4.5_0002266g0080 Nicotiana tabacum
Nitab4.5_0004086g0020 Nicotiana tabacum
Nn5g29190 Nelumbo nucifera
Nn6g32206 Nelumbo nucifera
Oeu040662.1 Olea europaea
Oeu046713.1 Olea europaea
Os02g0647300 Oryza sativa ssp. japonica
Peaxi162Scf00083g00176 Petunia axillaris
Peaxi162Scf01084g00113 Petunia axillaris
PGR119G2013 Punica granatum
PGSC0003DMG400003543 Solanum tuberosum
PGSC0003DMG400003710 Solanum tuberosum
Phvul.002G112100 Phaseolus vulgaris
Phvul.003G258700 Phaseolus vulgaris
Potri.005G117800 Populus trichocarpa
Potri.005G234400 Populus trichocarpa
Potri.007G016800 Populus trichocarpa
Pp3c19_5680 Physcomitrium patens
Prupe.7G164300 Prunus persica
Psat2g156480 Pisum sativum
PSO170G6156 Papaver somniferum
PSO357G0472 Papaver somniferum
PSO384G1649 Papaver somniferum
PSO541G3104 Papaver somniferum
QL02p010652 Quercus lobata
QL06p034499 Quercus lobata
RcHm_v2.0_Chr2g0100031 Rosa chinensis
Rhsim08G0036200 Rhododendron simsii
Sabra05G0180700 Salix brachista
Sabra07G0014100 Salix brachista
SalBow8G0802 Salvia bowleyana
Sc16g0002410 Simmondsia chinensis
Sed0012494 Sechium edule
SEGI_19656 Sequoiadendron giganteum
SEGI_31027 Sequoiadendron giganteum
SEGI_35079 Sequoiadendron giganteum
SEGI_39952 Sequoiadendron giganteum
SGA_v2.0_scaffold280G46844 Striga asiatica
SMO137G0251 Selaginella moellendorffii
SMO196G0122 Selaginella moellendorffii
SMO347G0241 Selaginella moellendorffii
SMO351G0055 Selaginella moellendorffii
Solyc02g084610.1 Solanum lycopersicum
Sopen02g029280 Solanum pennellii
Sp6g17460 Schrenkiella parvula
TAR625G0304 Trochodendron aralioides
THA.LOC104819189 Tarenaya hassleriana
THA.LOC104821314 Tarenaya hassleriana
Thecc.01G024400 Theobroma cacao
Thecc.08G037100 Theobroma cacao
Thhalv10013640m.g Eutrema salsugineum
TPR.G2403 Trifolium pratense
TWI73G0260 Tripterygium wilfordii
vmacro22100 Vaccinium macrocarpon
VMungo0251G3065 Vigna mungo
VMungo0251G3503 Vigna mungo
VMungo1215G0664 Vigna mungo
Zm00001eb186170 Zea mays

User provided reference genes

Program Settings