Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p00540 Brassica napus
Aa31LG10G700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2650 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.299 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.300 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.301 Anthoceros agrestis
Actinidia00919 Actinidia chinensis
Actinidia16227 Actinidia chinensis
Ah.06g182270 Amaranthus hybridus
Ah.06g182280 Amaranthus hybridus
AL1G63570 Arabidopsis lyrata
Aqoxy1G00107 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.578M4A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M9LRNQ Arachis hypogaea
AT1G55540 Arabidopsis thaliana
ATR0068G024 Amborella trichopoda
ATR0906G001 Amborella trichopoda
ATR0906G002 Amborella trichopoda
Atru.chr3.2057 Acer truncatum
AUR62015878 Chenopodium quinoa
AUR62020345 Chenopodium quinoa
BcaC01g01535 Brassica carinata
BcaNung06979 Brassica carinata
BolC3t21593H Brassica oleracea
BraA08t32112Z Brassica rapa
C03p92870 Brassica napus
CAN.G215.14 Capsicum annuum
CANSAT11G1563 Cannabis sativa
CARHR045230 Cardamine hirsuta
Carub.0001s4405 Capsella rubella
Ca_09617_v3 Cicer arietinum L.
Cc01_g00330 Coffea canephora
CDE02G0298 Ceratophyllum demersum
CDE02G1557 Ceratophyllum demersum
CDE02G2692 Ceratophyllum demersum
CDE04G1952 Ceratophyllum demersum
CDE04G1993 Ceratophyllum demersum
Cfa009530 Carpinus fangiana
Ciclev10014017m.g Citrus clementina
CiPaw.13G180100 Carya illinoinensis
ClCG11G012960 Citrullus lanatus
COL.COLO4_35067 Corchorus olitorius
COL.COLO4_35068 Corchorus olitorius
Cpa.g.sc119.15 Carica papaya
Cpa.g.sc119.16 Carica papaya
Cpa.g.sc119.17 Carica papaya
CsaV3_5G029430 Cucumis sativus L.
CSS0001625 Camellia sinensis var. sinensis
CSS0009629 Camellia sinensis var. sinensis
CSS0040729 Camellia sinensis var. sinensis
DCAR_024091 Daucus carota
Dinv06245 Davidia involucrata
Dinv13491 Davidia involucrata
Dinv15519 Davidia involucrata
Duzib168G1306 Durio zibethinus
ECA248G0177 Erigeron canadensis
EL10Ac4g07695 Beta vulgaris
Eucgr.J01742 Eucalyptus grandis
Eucgr.J01744 Eucalyptus grandis
Eucgr.J01832 Eucalyptus grandis
FAN03G1805 Fragaria x ananassa
FAN07G1051 Fragaria x ananassa
FAN10G2778 Fragaria x ananassa
FAN11G0901 Fragaria x ananassa
FAN11G3847 Fragaria x ananassa
FAN12G3781 Fragaria x ananassa
FAN14G4108 Fragaria x ananassa
FAN14G5048 Fragaria x ananassa
FAN16G3321 Fragaria x ananassa
FAN21G3487 Fragaria x ananassa
FAN21G4070 Fragaria x ananassa
FAN25G0645 Fragaria x ananassa
FvH4_3g45960 Fragaria vesca
Glyma.06G239100 Glycine max
Glyma.18G007300 Glycine max
Gohir.A08G083000 Gossypium hirsutum
Gohir.D08G092400 Gossypium hirsutum
Gorai.004G097900 Gossypium raimondii
GSVIVG01025508001 Vitis vinifera
Haze_22920 Corylus avellana
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla
Hma1.2p1_0589F.1_g184750 Hydrangea macrophylla
Hma1.2p1_0589F.1_g184760 Hydrangea macrophylla
HPP92_014371 Vanilla planifolia
Hund05058 Selenicereus undatus
Hund28035 Selenicereus undatus
Hund28037 Selenicereus undatus
Lalb_Chr13g0295751 Lupinus albus
Lj2A889G19 Lonicera japonica
Lj2A889T20 Lonicera japonica
Lj5g0011313 Lotus japonicus
Lsat_1_v5_gn_1_71321 Lactuca sativa
Manes.15G110800 Manihot esculenta
Mapoly0022s0121 Marchantia polymorpha
MBI04_g11451_MAGBIO Magnolia biondii
MD11G1001000 Malus domestica
Medtr1g069005 Medicago truncatula
MELO3C011789.2 Cucumis melo
Migut.N00529 Erythranthe guttata
MSTRG.12811 Avicennia marina
MSTRG.12812 Avicennia marina
MSTRG.929 Avicennia marina
Nitab4.5_0000075g0170 Nicotiana tabacum
Nitab4.5_0000075g0180 Nicotiana tabacum
Nitab4.5_0000890g0180 Nicotiana tabacum
Nn6g31499 Nelumbo nucifera
Nn7g36938 Nelumbo nucifera
Oeu023963.1 Olea europaea
Os07g0685400 Oryza sativa ssp. japonica
Peaxi162Scf00186g00168 Petunia axillaris
Peaxi162Scf00186g01612 Petunia axillaris
Peaxi162Scf00186g01613 Petunia axillaris
PGR119G2408 Punica granatum
Phvul.007G078700 Phaseolus vulgaris
Potri.001G001201 Populus trichocarpa
Potri.001G001250 Populus trichocarpa
Potri.003G223400 Populus trichocarpa
Pp3c13_12950 Physcomitrium patens
Prupe.6G001200 Prunus persica
Psat6g065800 Pisum sativum
PSO384G0423 Papaver somniferum
QL01p007857 Quercus lobata
QL01p007875 Quercus lobata
QL01p007891 Quercus lobata
QL04p013873 Quercus lobata
RcHm_v2.0_Chr5g0084071 Rosa chinensis
RcHm_v2.0_Chr7g0214951 Rosa chinensis
Rhsim10G0100200 Rhododendron simsii
Rhsim13G0209100 Rhododendron simsii
Sabra03G0166000 Salix brachista
SalBow3G1183 Salvia bowleyana
SalBow3G2955 Salvia bowleyana
Sc06g0004140 Simmondsia chinensis
Sed0013310 Sechium edule
SEGI_11629 Sequoiadendron giganteum
SEGI_27502 Sequoiadendron giganteum
SEGI_28014 Sequoiadendron giganteum
SGA_v2.0_scaffold6G03332 Striga asiatica
SMO167G0064 Selaginella moellendorffii
Solyc02g032380.3 Solanum lycopersicum
Solyc02g032450.3 Solanum lycopersicum
Solyc02g032480.3 Solanum lycopersicum
Solyc02g032490.3 Solanum lycopersicum
Sopen01g019210 Solanum pennellii
Sopen02g010770 Solanum pennellii
Sp1g41160 Schrenkiella parvula
TAR623G0338 Trochodendron aralioides
THA.LOC104822690 Tarenaya hassleriana
Thecc.09G205800 Theobroma cacao
Thhalv10011181m.g Eutrema salsugineum
TPR.G22583 Trifolium pratense
TWI34G1214 Tripterygium wilfordii
unitig_0.g1239 Utricularia gibba
unitig_0.g1240 Utricularia gibba
vmacro09616 Vaccinium macrocarpon
VMungo0720G0327 Vigna mungo
VMungo0720G2527 Vigna mungo
Zm00001eb202920 Zea mays
Zm00001eb331030 Zea mays
Zm00001eb411990 Zea mays

User provided reference genes

Program Settings