Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p03030 Brassica napus
Aa31LG9G14390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3949 Anthoceros agrestis
Actinidia29442 Actinidia chinensis
Ah.05g172340 Amaranthus hybridus
AL3G50940 Arabidopsis lyrata
Aqoxy5G02431 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.WF7TJ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y35QAD Arachis hypogaea
AT2G17900 Arabidopsis thaliana
ATR0684G004 Amborella trichopoda
Atru.chr13.1338 Acer truncatum
Atru.chr13.1381 Acer truncatum
AUR62004708 Chenopodium quinoa
AUR62023625 Chenopodium quinoa
AUR62030552 Chenopodium quinoa
BcaB03g16570 Brassica carinata
BcaB06g29210 Brassica carinata
BcaC06g36340 Brassica carinata
BcaNung02846 Brassica carinata
BolC7t40914H Brassica oleracea
BraA07t28100Z Brassica rapa
C07p05160 Brassica napus
CAN.G1396.8 Capsicum annuum
CANSAT11G0049 Cannabis sativa
CARHR108400 Cardamine hirsuta
Carub.0003s3205 Capsella rubella
Ca_15216_v3 Cicer arietinum L.
CBR_g16883 Chara braunii
Cc10_g10520 Coffea canephora
Cc10_g10530 Coffea canephora
Cc10_g10540 Coffea canephora
CDE05G1456 Ceratophyllum demersum
CDE11G0913 Ceratophyllum demersum
Cfa015974 Carpinus fangiana
Cfa024297 Carpinus fangiana
Ciclev10001105m.g Citrus clementina
CiPaw.06G026300 Carya illinoinensis
ClCG03G009360 Citrullus lanatus
COL.COLO4_38230 Corchorus olitorius
COL.COLO4_38232 Corchorus olitorius
COL.COLO4_38233 Corchorus olitorius
Cpa.g.sc36.10 Carica papaya
Cre01.g016450 Chlamydomonas reinhardtii
Cre09.g408100 Chlamydomonas reinhardtii
Cre12.g553600 Chlamydomonas reinhardtii
Cre13.g580550 Chlamydomonas reinhardtii
CsaV3_5G023260 Cucumis sativus L.
CSS0028158 Camellia sinensis var. sinensis
CSS0038302 Camellia sinensis var. sinensis
DCAR_002659 Daucus carota
Dinv27371 Davidia involucrata
Duzib093G1652 Durio zibethinus
ECA246G3183 Erigeron canadensis
EL10Ac1g00021 Beta vulgaris
Eucgr.G00611 Eucalyptus grandis
FAN15G0234 Fragaria x ananassa
FAN15G1155 Fragaria x ananassa
FAN15G1996 Fragaria x ananassa
FAN24G0496 Fragaria x ananassa
FAN24G3351 Fragaria x ananassa
FAN27G1826 Fragaria x ananassa
FvH4_2g03781 Fragaria vesca
FvH4_2g26270 Fragaria vesca
FvH4_2g26271 Fragaria vesca
FvH4_2g26280 Fragaria vesca
Glyma.04G252800 Glycine max
Glyma.06G109667 Glycine max
Glyma.06G109733 Glycine max
Gohir.A02G074300 Gossypium hirsutum
Gohir.D02G081500 Gossypium hirsutum
Gorai.005G091200 Gossypium raimondii
GSVIVG01008928001 Vitis vinifera
HanXRQChr05g0149221 Helianthus annuus
Haze_00500 Corylus avellana
Hma1.2p1_0038F.1_g023980 Hydrangea macrophylla
Hma1.2p1_0038F.1_g023990 Hydrangea macrophylla
HPP92_009359 Vanilla planifolia
Hund27046 Selenicereus undatus
Lalb_Chr08g0241631 Lupinus albus
Lj1g0007587 Lotus japonicus
Lj7A312G16 Lonicera japonica
Lj7A323T18 Lonicera japonica
Lj7C323T6 Lonicera japonica
Lsat_1_v5_gn_6_109160 Lactuca sativa
Manes.18G073743 Manihot esculenta
Mapoly0082s0074 Marchantia polymorpha
Mapoly0101s0047 Marchantia polymorpha
MCO03G306 Micromonas commoda
MCO04G092 Micromonas commoda
MCO11G526 Micromonas commoda
MCO14G073 Micromonas commoda
MCO14G460 Micromonas commoda
MD15G1356600 Malus domestica
Medtr3g073000 Medicago truncatula
MELO3C003048.2 Cucumis melo
Migut.C01175 Erythranthe guttata
Migut.C01176 Erythranthe guttata
Migut.C01177 Erythranthe guttata
MSTRG.25402 Avicennia marina
Nitab4.5_0000633g0160 Nicotiana tabacum
Nitab4.5_0004882g0030 Nicotiana tabacum
Nn5g28099 Nelumbo nucifera
Oeu047923.1 Olea europaea
Os03g0704200 Oryza sativa ssp. japonica
Peaxi162Scf00051g00731 Petunia axillaris
PGR042G0918 Punica granatum
PGSC0003DMG400017559 Solanum tuberosum
Phvul.009G121500 Phaseolus vulgaris
Potri.005G173100 Populus trichocarpa
Pp3c11_23530 Physcomitrium patens
Pp3c19_7630 Physcomitrium patens
PRCOL_00002940 Prasinoderma coloniale
PRCOL_00006858 Prasinoderma coloniale
Prupe.1G503800 Prunus persica
Psat5g133640 Pisum sativum
PSO170G3797 Papaver somniferum
QL09p035929 Quercus lobata
RcHm_v2.0_Chr2g0164551 Rosa chinensis
RcHm_v2.0_Chr5g0052151 Rosa chinensis
RcHm_v2.0_Chr6g0294881 Rosa chinensis
RcHm_v2.0_Chr6g0294891 Rosa chinensis
Rhsim11G0066100 Rhododendron simsii
Sabra05G0130600 Salix brachista
SalBow7G0677 Salvia bowleyana
SalBow7G1607 Salvia bowleyana
Sc23g0000850 Simmondsia chinensis
Sed0009263 Sechium edule
SEGI_04710 Sequoiadendron giganteum
SEGI_10642 Sequoiadendron giganteum
SEGI_20195 Sequoiadendron giganteum
SEGI_37327 Sequoiadendron giganteum
SGA_v2.0_scaffold52G19008 Striga asiatica
SHI09394 Sapria himalayana
SHI09395 Sapria himalayana
SMO116G0295 Selaginella moellendorffii
SMO367G0641 Selaginella moellendorffii
Solyc01g034050.1 Solanum lycopersicum
Solyc05g040060.1 Solanum lycopersicum
Solyc06g060390.3 Solanum lycopersicum
Solyc08g016560.3 Solanum lycopersicum
Sopen06g020530 Solanum pennellii
Sp3g31340 Schrenkiella parvula
TAR625G1407 Trochodendron aralioides
THA.LOC104813139 Tarenaya hassleriana
Thecc.08G118700 Theobroma cacao
Thecc.08G118800 Theobroma cacao
Thecc.08G118900 Theobroma cacao
Thecc.08G119000 Theobroma cacao
Thecc.08G119200 Theobroma cacao
Thecc.08G119300 Theobroma cacao
Thecc.08G119400 Theobroma cacao
Thhalv10022664m.g Eutrema salsugineum
TPR.G22341 Trifolium pratense
TWI12G1231 Tripterygium wilfordii
unitig_46.g18495 Utricularia gibba
VMungo1309G2182 Vigna mungo
Zm00001eb002880 Zea mays
Zm00001eb216690 Zea mays
Zm00001eb393760 Zea mays

User provided reference genes

Program Settings