Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04690 Brassica napus
A03p62120 Brassica napus
Aa31sc21G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2605 Anthoceros agrestis
Actinidia00306 Actinidia chinensis
Actinidia02393 Actinidia chinensis
Actinidia28030 Actinidia chinensis
Actinidia30718 Actinidia chinensis
Ah.01g023950 Amaranthus hybridus
AL7G17880 Arabidopsis lyrata
Aqoxy5G01383 Aquilegia oxysepala
Aqoxy6G00871 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.80YYCP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YWY5YF Arachis hypogaea
AT4G33625 Arabidopsis thaliana
ATR0767G217 Amborella trichopoda
Atru.chr6.1271 Acer truncatum
AUR62012885 Chenopodium quinoa
AUR62027109 Chenopodium quinoa
BcaC09g52174 Brassica carinata
BcaNung02186 Brassica carinata
BolC1t00490H Brassica oleracea
BolC7t46423H Brassica oleracea
BraA01t00452Z Brassica rapa
BraA03t15251Z Brassica rapa
BraA03t15274Z Brassica rapa
C01p05080 Brassica napus
C07p59770 Brassica napus
CAN.G755.11 Capsicum annuum
CAN.G997.3 Capsicum annuum
CANSAT54G1769 Cannabis sativa
CARHR241720 Cardamine hirsuta
Carub.0007s0681 Capsella rubella
Ca_00165_v3 Cicer arietinum L.
Cc02_g20910 Coffea canephora
CDE01G0475 Ceratophyllum demersum
CDE02G2113 Ceratophyllum demersum
CDE02G4257 Ceratophyllum demersum
CDE04G0584 Ceratophyllum demersum
Cfa005736 Carpinus fangiana
Ciclev10029296m.g Citrus clementina
CiPaw.05G029400 Carya illinoinensis
CiPaw.06G157800 Carya illinoinensis
ClCG10G009630 Citrullus lanatus
COL.COLO4_25309 Corchorus olitorius
COL.COLO4_32390 Corchorus olitorius
Cpa.g.sc20.3 Carica papaya
Cre09.g398845 Chlamydomonas reinhardtii
CsaV3_4G014750 Cucumis sativus L.
CSS0006356 Camellia sinensis var. sinensis
CSS0011276 Camellia sinensis var. sinensis
CSS0017372 Camellia sinensis var. sinensis
CSS0028940 Camellia sinensis var. sinensis
DCAR_001857 Daucus carota
DCAR_032425 Daucus carota
Dinv16003 Davidia involucrata
Duzib132G0794 Durio zibethinus
ECA234G4299 Erigeron canadensis
EL10Ac9g22071 Beta vulgaris
Eucgr.G00989 Eucalyptus grandis
FAN20G0168 Fragaria x ananassa
FAN24G0482 Fragaria x ananassa
FvH4_2g11740 Fragaria vesca
Glyma.07G182000 Glycine max
Glyma.08G067761 Glycine max
Glyma.08G067800 Glycine max
Glyma.13G256500 Glycine max
Gohir.A10G179201 Gossypium hirsutum
Gohir.A11G229600 Gossypium hirsutum
Gohir.A13G050800 Gossypium hirsutum
Gohir.D13G049600 Gossypium hirsutum
Gorai.013G055400 Gossypium raimondii
GSVIVG01015661001 Vitis vinifera
HanXRQChr10g0289991 Helianthus annuus
HanXRQChr16g0514551 Helianthus annuus
Haze_10520 Corylus avellana
Haze_10521 Corylus avellana
Hma1.2p1_0908F.1_g235500 Hydrangea macrophylla
HPP92_019609 Vanilla planifolia
Hund00379 Selenicereus undatus
Hund06459 Selenicereus undatus
Lalb_Chr05g0217811 Lupinus albus
Lalb_Chr16g0382951 Lupinus albus
Lj4g0013422 Lotus japonicus
Lj5C230T1 Lonicera japonica
Lj6g0006499 Lotus japonicus
Lj9A348T62 Lonicera japonica
Lj9A348T63 Lonicera japonica
Lsat_1_v5_gn_5_110001 Lactuca sativa
Manes.07G041900 Manihot esculenta
Manes.10G097800 Manihot esculenta
Mapoly0135s0052 Marchantia polymorpha
MBI16_g12465_MAGBIO Magnolia biondii
MD05G1047700 Malus domestica
MD10G1054500 Malus domestica
Medtr2g009630 Medicago truncatula
MELO3C018054.2 Cucumis melo
Migut.B00550 Erythranthe guttata
MSTRG.16621 Avicennia marina
Nitab4.5_0001636g0030 Nicotiana tabacum
Nitab4.5_0002095g0050 Nicotiana tabacum
Nn1g05574 Nelumbo nucifera
Nn5g29881 Nelumbo nucifera
Oeu010528.2 Olea europaea
Oeu029681.1 Olea europaea
Os07g0118300 Oryza sativa ssp. japonica
Peaxi162Scf00299g00625 Petunia axillaris
PGR042G1599 Punica granatum
PGSC0003DMG400033581 Solanum tuberosum
Phvul.002G213000 Phaseolus vulgaris
Phvul.006G201800 Phaseolus vulgaris
Potri.007G115800 Populus trichocarpa
Potri.017G043200 Populus trichocarpa
Pp3c13_16610 Physcomitrium patens
Pp3c15_10510 Physcomitrium patens
Pp3c4_7970 Physcomitrium patens
Prupe.8G070100 Prunus persica
Psat1g214000 Pisum sativum
PSO210G5219 Papaver somniferum
PSO541G1276 Papaver somniferum
PSO675G8955 Papaver somniferum
QL11p025232 Quercus lobata
RcHm_v2.0_Chr6g0270971 Rosa chinensis
Rhsim11G0139900 Rhododendron simsii
Rhsim11G0140000 Rhododendron simsii
Rhsim11G0142300 Rhododendron simsii
Rhsim11G0142400 Rhododendron simsii
Sabra17G0029400 Salix brachista
SalBow6G2847 Salvia bowleyana
SalBow6G6277 Salvia bowleyana
Sc18g0007070 Simmondsia chinensis
Sed0000556 Sechium edule
Sed0014769 Sechium edule
SEGI_26358 Sequoiadendron giganteum
SGA_v2.0_scaffold83G26377 Striga asiatica
SMO361G0062 Selaginella moellendorffii
SMO361G0333 Selaginella moellendorffii
SMO361G0358 Selaginella moellendorffii
SMO361G0551 Selaginella moellendorffii
Solyc01g105980.3 Solanum lycopersicum
Sopen01g048360 Solanum pennellii
Sp7g31350 Schrenkiella parvula
TAR381G0147 Trochodendron aralioides
TAR625G0448 Trochodendron aralioides
TAR625G0886 Trochodendron aralioides
THA.LOC104807182 Tarenaya hassleriana
Thecc.02G129200 Theobroma cacao
Thhalv10002778m.g Eutrema salsugineum
Thhalv10026279m.g Eutrema salsugineum
TPR.G8448 Trifolium pratense
TPR.G9512 Trifolium pratense
TWI14G0417 Tripterygium wilfordii
TWI59G0067 Tripterygium wilfordii
unitig_0.g894 Utricularia gibba
vmacro01860 Vaccinium macrocarpon
VMungo0251G0098 Vigna mungo
VMungo0540G1072 Vigna mungo
Zm00001eb118020 Zea mays
Zm00001eb298970 Zea mays
Zm00001eb299000 Zea mays

User provided reference genes

Program Settings