Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00530 Brassica napus
A04p10610 Brassica napus
Aa31LG6G15640 Aethionema arabicum
Actinidia08329 Actinidia chinensis
Actinidia33369 Actinidia chinensis
Ah.04g161200 Amaranthus hybridus
AL7G11780 Arabidopsis lyrata
Aqoxy2G03854 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.02EUR6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3C43J1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.94164M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E9WDF1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FJ4QJG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PFH739 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PL6VNF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJV3W7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X4R883 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea
AT4G39630 Arabidopsis thaliana
ATR0210G008 Amborella trichopoda
ATR0730G218 Amborella trichopoda
Atru.chr3.204 Acer truncatum
AUR62000713 Chenopodium quinoa
AUR62005250 Chenopodium quinoa
BcaB06g27071 Brassica carinata
BcaC02g09572 Brassica carinata
BcaNung00884 Brassica carinata
BolC4t26003H Brassica oleracea
BraA01t00060Z Brassica rapa
BraA04t16724Z Brassica rapa
C04p44290 Brassica napus
CAN.G861.28 Capsicum annuum
CANSAT01G2370 Cannabis sativa
CARHR215520 Cardamine hirsuta
CARHR247100 Cardamine hirsuta
Carub.0007s0150 Capsella rubella
Ca_23004_v3 Cicer arietinum L.
Ca_25628_v3 Cicer arietinum L.
Cc02_g15410 Coffea canephora
CDE04G3174 Ceratophyllum demersum
CDE04G3300 Ceratophyllum demersum
CDE06G2627 Ceratophyllum demersum
Ciclev10026392m.g Citrus clementina
CiPaw.04G093900 Carya illinoinensis
ClCG01G019130 Citrullus lanatus
ClCG05G021300 Citrullus lanatus
COL.COLO4_11036 Corchorus olitorius
CsaV3_5G036000 Cucumis sativus L.
CsaV3_6G045820 Cucumis sativus L.
CSS0002847 Camellia sinensis var. sinensis
CSS0015836 Camellia sinensis var. sinensis
CSS0022213 Camellia sinensis var. sinensis
CSS0025780 Camellia sinensis var. sinensis
DCAR_014253 Daucus carota
Dinv05687 Davidia involucrata
Dinv13358 Davidia involucrata
Duzib147G1438 Durio zibethinus
ECA238G1615 Erigeron canadensis
EL10Ac4g09863 Beta vulgaris
Eucgr.I00528 Eucalyptus grandis
FAN19G1427 Fragaria x ananassa
FAN19G3081 Fragaria x ananassa
FAN23G0375 Fragaria x ananassa
FAN26G0673 Fragaria x ananassa
FAN26G2580 Fragaria x ananassa
FAN28G1272 Fragaria x ananassa
FAN28G1914 Fragaria x ananassa
FAN28G2224 Fragaria x ananassa
FvH4_1g21950 Fragaria vesca
FvH4_1g25670 Fragaria vesca
Glyma.09G092600 Glycine max
Glyma.15G199500 Glycine max
Gohir.1Z049552 Gossypium hirsutum
Gohir.A11G053300 Gossypium hirsutum
Gohir.D11G056800 Gossypium hirsutum
Gorai.007G062000 Gossypium raimondii
GSVIVG01022203001 Vitis vinifera
HanXRQChr07g0202331 Helianthus annuus
HanXRQChr14g0458831 Helianthus annuus
Haze_05964 Corylus avellana
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla
HPP92_005242 Vanilla planifolia
Lalb_Chr11g0075201 Lupinus albus
Lalb_Chr12g0203581 Lupinus albus
Lj2A929T16 Lonicera japonica
Lj2A942G27 Lonicera japonica
Lj3g0008934 Lotus japonicus
Lj4A903G12 Lonicera japonica
Lj6g0018564 Lotus japonicus
Lsat_1_v5_gn_2_120680 Lactuca sativa
Lsat_1_v5_gn_2_122181 Lactuca sativa
Manes.12G140400 Manihot esculenta
MBI04_g31212_MAGBIO Magnolia biondii
MD01G1016500 Malus domestica
MD15G1334800 Malus domestica
MELO3C007790.2 Cucumis melo
MELO3C012399.2 Cucumis melo
Migut.H01422 Erythranthe guttata
MSTRG.14740 Avicennia marina
Nitab4.5_0000477g0120 Nicotiana tabacum
Nitab4.5_0001495g0020 Nicotiana tabacum
Nitab4.5_0007222g0010 Nicotiana tabacum
Nitab4.5_0007717g0020 Nicotiana tabacum
Nn2g14563 Nelumbo nucifera
Nn8g40276 Nelumbo nucifera
Oeu040918.3 Olea europaea
Oeu043116.1 Olea europaea
Os08g0290400 Oryza sativa ssp. japonica
Peaxi162Scf00171g00006 Petunia axillaris
PGR004G1100 Punica granatum
PGSC0003DMG400015213 Solanum tuberosum
Phvul.009G211400 Phaseolus vulgaris
Potri.005G082500 Populus trichocarpa
Potri.007G085100 Populus trichocarpa
Prupe.6G176600 Prunus persica
Prupe.8G078400 Prunus persica
Psat2g176760 Pisum sativum
Psat4g139880 Pisum sativum
Psat4g139920 Pisum sativum
QL06p033465 Quercus lobata
RcHm_v2.0_Chr2g0115971 Rosa chinensis
Rhsim05G0180000 Rhododendron simsii
Sabra05G0067500 Salix brachista
Sabra07G0070400 Salix brachista
Sc16g0008840 Simmondsia chinensis
Sed0026038 Sechium edule
SEGI_02201 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30591 Striga asiatica
SGA_v2.0_scaffold83G26423 Striga asiatica
SHI54251 Sapria himalayana
Solyc03g019910.3 Solanum lycopersicum
Sopen03g029710 Solanum pennellii
Sp7g04740 Schrenkiella parvula
Sp7g36260 Schrenkiella parvula
TAR625G1215 Trochodendron aralioides
TAR626G1474 Trochodendron aralioides
THA.LOC104807718 Tarenaya hassleriana
Thecc.01G110300 Theobroma cacao
Thhalv10027902m.g Eutrema salsugineum
TPR.G33715 Trifolium pratense
TWI53G0384 Tripterygium wilfordii
TWI74G0090 Tripterygium wilfordii
unitig_22.g6757 Utricularia gibba
vmacro18624 Vaccinium macrocarpon
vmacro21317 Vaccinium macrocarpon
VMungo1309G0247 Vigna mungo
Zm00001eb192330 Zea mays

User provided reference genes

Program Settings