Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02010 Brassica napus
A10p24750 Brassica napus
Aa31sc127G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2493 Anthoceros agrestis
Actinidia03014 Actinidia chinensis
Actinidia38236 Actinidia chinensis
Ah.10g033110 Amaranthus hybridus
AL6G23300 Arabidopsis lyrata
AL6G23330 Arabidopsis lyrata
AL6G24140 Arabidopsis lyrata
Aqoxy4G03158 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GKFC1I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q6727A Arachis hypogaea
AT5G13520 Arabidopsis thaliana
ATR0594G057 Amborella trichopoda
Atru.chr12.611 Acer truncatum
AUR62027896 Chenopodium quinoa
AUR62036016 Chenopodium quinoa
BcaC04g19110 Brassica carinata
BcaNung01146 Brassica carinata
BcaNung01890 Brassica carinata
BcaNung06329 Brassica carinata
BcaNung06330 Brassica carinata
BolC2t06563H Brassica oleracea
BolC9t59201H Brassica oleracea
BraA02t05173Z Brassica rapa
BraA10t44538Z Brassica rapa
C02p06220 Brassica napus
C09p63580 Brassica napus
CAN.G1534.2 Capsicum annuum
CAN.G1534.3 Capsicum annuum
CAN.G742.18 Capsicum annuum
CANSAT11G2341 Cannabis sativa
CARHR199920 Cardamine hirsuta
Carub.0006s1168 Capsella rubella
Ca_11379_v3 Cicer arietinum L.
CBR_g45218 Chara braunii
Cc09_g02360 Coffea canephora
CDE04G1784 Ceratophyllum demersum
CDE07G0672 Ceratophyllum demersum
Cfa001575 Carpinus fangiana
Cfa024826 Carpinus fangiana
Ciclev10030974m.g Citrus clementina
CiPaw.01G277900 Carya illinoinensis
ClCG09G020360 Citrullus lanatus
Cpa.g.sc1.280 Carica papaya
Cre13.g585900 Chlamydomonas reinhardtii
CsaV3_5G026050 Cucumis sativus L.
CSS0008191 Camellia sinensis var. sinensis
CSS0021534 Camellia sinensis var. sinensis
CSS0049406 Camellia sinensis var. sinensis
DCAR_006479 Daucus carota
Dinv11819 Davidia involucrata
Duzib106G0308 Durio zibethinus
Duzib128G1554 Durio zibethinus
ECA233G4824 Erigeron canadensis
ECA233G4916 Erigeron canadensis
ECA233G5280 Erigeron canadensis
ECA248G3854 Erigeron canadensis
EL10Ac2g03540 Beta vulgaris
Eucgr.J01127 Eucalyptus grandis
Eucgr.J01128 Eucalyptus grandis
FAN01G2088 Fragaria x ananassa
FAN06G4255 Fragaria x ananassa
FAN06G4941 Fragaria x ananassa
FAN10G3892 Fragaria x ananassa
FvH4_7g20511 Fragaria vesca
Glyma.20G244100 Glycine max
Gohir.A13G021200 Gossypium hirsutum
Gohir.D04G090332 Gossypium hirsutum
Gohir.D05G318432 Gossypium hirsutum
Gohir.D05G365432 Gossypium hirsutum
Gohir.D06G074650 Gossypium hirsutum
Gohir.D12G073901 Gossypium hirsutum
Gohir.D13G021700 Gossypium hirsutum
Gohir.D13G137700 Gossypium hirsutum
Gorai.009G341300 Gossypium raimondii
Gorai.009G426700 Gossypium raimondii
Gorai.013G024500 Gossypium raimondii
Gorai.013G157100 Gossypium raimondii
GSVIVG01032649001 Vitis vinifera
HanXRQChr12g0367761 Helianthus annuus
Haze_16953 Corylus avellana
Hma1.2p1_2685F.1_g326910 Hydrangea macrophylla
HPP92_015409 Vanilla planifolia
HPP92_026987 Vanilla planifolia
Hund19290 Selenicereus undatus
Lalb_Chr21g0307511 Lupinus albus
Lj5g0008233 Lotus japonicus
Lj7A436T61 Lonicera japonica
Lj8A94T45 Lonicera japonica
Lsat_1_v5_gn_8_21161 Lactuca sativa
Manes.18G141033 Manihot esculenta
Manes.18G141037 Manihot esculenta
Manes.18G142200 Manihot esculenta
Mapoly0007s0135 Marchantia polymorpha
MBI05_g24466_MAGBIO Magnolia biondii
MCO01G623 Micromonas commoda
MD01G1113900 Malus domestica
MD01G1114100 Malus domestica
MD07G1182000 Malus domestica
Medtr1g116230 Medicago truncatula
MELO3C025493.2 Cucumis melo
MELO3C025494.2 Cucumis melo
MELO3C027138.2 Cucumis melo
Migut.F01788 Erythranthe guttata
MSTRG.361 Avicennia marina
MSTRG.8160 Avicennia marina
MSTRG.8161 Avicennia marina
Nitab4.5_0000561g0010 Nicotiana tabacum
Nitab4.5_0000830g0030 Nicotiana tabacum
Nitab4.5_0000830g0050 Nicotiana tabacum
Nitab4.5_0005262g0010 Nicotiana tabacum
Nn2g12957 Nelumbo nucifera
Nn8g39313 Nelumbo nucifera
Oeu016149.1 Olea europaea
Os03g0819100 Oryza sativa ssp. japonica
Peaxi162Scf01024g00121 Petunia axillaris
Peaxi162Scf01024g00123 Petunia axillaris
PGR044G2316 Punica granatum
PGSC0003DMG400028998 Solanum tuberosum
Phvul.007G005900 Phaseolus vulgaris
Potri.008G045900 Populus trichocarpa
Potri.010G215700 Populus trichocarpa
PRCOL_00006050 Prasinoderma coloniale
Prupe.2G220700 Prunus persica
Psat6g239960 Pisum sativum
PSO339G6713 Papaver somniferum
PSO384G2310 Papaver somniferum
QL08p057259 Quercus lobata
RcHm_v2.0_Chr1g0364401 Rosa chinensis
Rhsim12G0129400 Rhododendron simsii
Sabra08G0032200 Salix brachista
Sabra10G0166800 Salix brachista
SalBow3G3918 Salvia bowleyana
Sed0016157 Sechium edule
SEGI_01278 Sequoiadendron giganteum
SEGI_27690 Sequoiadendron giganteum
SGA_v2.0_scaffold71G24033 Striga asiatica
SMO356G0749 Selaginella moellendorffii
Solyc04g049720.4 Solanum lycopersicum
Sopen04g019990 Solanum pennellii
Sp6g30500 Schrenkiella parvula
TAR369G0956 Trochodendron aralioides
THA.LOC104827314 Tarenaya hassleriana
Thecc.10G065100 Theobroma cacao
Thhalv10012982m.g Eutrema salsugineum
TPR.G10423 Trifolium pratense
TWI38G1612 Tripterygium wilfordii
TWI38G2347 Tripterygium wilfordii
unitig_0.g185 Utricularia gibba
unitig_60.g25720 Utricularia gibba
vmacro07094 Vaccinium macrocarpon
VMungo0720G1168 Vigna mungo
VMungo0720G3071 Vigna mungo
Zm00001eb062480 Zea mays
Zm00001eb103910 Zea mays
Zm00001eb160290 Zea mays
Zm00001eb246100 Zea mays
Zm00001eb258690 Zea mays

User provided reference genes

Program Settings