Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00700 Brassica napus
A07p00710 Brassica napus
A09p12650 Brassica napus
Aa31LG8G16840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.430 Anthoceros agrestis
Actinidia09445 Actinidia chinensis
Actinidia17528 Actinidia chinensis
Actinidia39785 Actinidia chinensis
Actinidia39786 Actinidia chinensis
Ah.14g083300 Amaranthus hybridus
Ah.14g083310 Amaranthus hybridus
Ah.14g083320 Amaranthus hybridus
AL3G48250 Arabidopsis lyrata
Aqoxy7G03881 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8771PM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.96JC9B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C16NHX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8QSGL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N3ID59 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SL9UG3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TC5UZA Arachis hypogaea
AT2G19950 Arabidopsis thaliana
ATR0693G380 Amborella trichopoda
ATR0705G155 Amborella trichopoda
Atru.chr7.1446 Acer truncatum
AUR62010900 Chenopodium quinoa
AUR62021427 Chenopodium quinoa
BcaC04g22803 Brassica carinata
BcaC06g36663 Brassica carinata
BcaNung04089 Brassica carinata
BolC7t40572H Brassica oleracea
BolC9t54403H Brassica oleracea
BraA07t27869Z Brassica rapa
BraA07t27870Z Brassica rapa
BraA09t36912Z Brassica rapa
C07p01440 Brassica napus
C09p15010 Brassica napus
CAN.G1642.10 Capsicum annuum
CANSAT56G2449 Cannabis sativa
CARHR110390 Cardamine hirsuta
CARHR266410 Cardamine hirsuta
Carub.0003s3420 Capsella rubella
Ca_25562_v3 Cicer arietinum L.
CBR_g39203 Chara braunii
Cc06_g10330 Coffea canephora
Cc06_g10340 Coffea canephora
CDE02G0772 Ceratophyllum demersum
CDE02G3418 Ceratophyllum demersum
CDE04G3494 Ceratophyllum demersum
Ciclev10007632m.g Citrus clementina
CiPaw.03G226100 Carya illinoinensis
CiPaw.04G158800 Carya illinoinensis
ClCG11G002190 Citrullus lanatus
COL.COLO4_34764 Corchorus olitorius
Cpa.g.sc40.63 Carica papaya
Cpa.g.sc40.64 Carica papaya
Cpa.g.sc40.65 Carica papaya
Cre12.g517500 Chlamydomonas reinhardtii
CsaV3_2G001970 Cucumis sativus L.
CSS0002032 Camellia sinensis var. sinensis
CSS0009570 Camellia sinensis var. sinensis
DCAR_012046 Daucus carota
Dinv36695 Davidia involucrata
Duzib168G0844 Durio zibethinus
Duzib187G1416 Durio zibethinus
ECA133G0002 Erigeron canadensis
ECA236G0540 Erigeron canadensis
EL10Ac8g18398 Beta vulgaris
Eucgr.C01004 Eucalyptus grandis
FAN19G2910 Fragaria x ananassa
FAN23G2550 Fragaria x ananassa
FAN26G0748 Fragaria x ananassa
FAN26G2333 Fragaria x ananassa
FAN28G2435 Fragaria x ananassa
FvH4_1g05970 Fragaria vesca
Glyma.01G008900 Glycine max
Glyma.16G077500 Glycine max
Gohir.A06G066600 Gossypium hirsutum
Gohir.A08G242800 Gossypium hirsutum
Gohir.D01G081701 Gossypium hirsutum
Gohir.D04G126400 Gossypium hirsutum
Gohir.D05G357440 Gossypium hirsutum
Gohir.D05G357788 Gossypium hirsutum
Gohir.D06G065100 Gossypium hirsutum
Gohir.D08G263700 Gossypium hirsutum
Gorai.003G091600 Gossypium raimondii
Gorai.004G281700 Gossypium raimondii
Gorai.010G076200 Gossypium raimondii
GSVIVG01015314001 Vitis vinifera
HanXRQChr02g0041981 Helianthus annuus
HanXRQChr03g0072061 Helianthus annuus
HanXRQChr10g0316161 Helianthus annuus
HanXRQChr12g0358161 Helianthus annuus
Haze_25812 Corylus avellana
Hma1.2p1_0571F.1_g180870 Hydrangea macrophylla
HPP92_005563 Vanilla planifolia
HPP92_005577 Vanilla planifolia
Hund28808 Selenicereus undatus
Hund28810 Selenicereus undatus
Hund29368 Selenicereus undatus
Hund29369 Selenicereus undatus
Lalb_Chr14g0371821 Lupinus albus
Lalb_Chr24g0397331 Lupinus albus
Lj2g0014691 Lotus japonicus
Lsat_1_v5_gn_8_96840 Lactuca sativa
Manes.16G110100 Manihot esculenta
MBI01_g35400_MAGBIO Magnolia biondii
MBI07_g22518_MAGBIO Magnolia biondii
MBI07_g30871_MAGBIO Magnolia biondii
MD02G1064300 Malus domestica
MD15G1195100 Malus domestica
Medtr6g088595 Medicago truncatula
MELO3C004583.2 Cucumis melo
Migut.K00530 Erythranthe guttata
MSTRG.26380 Avicennia marina
Nitab4.5_0000566g0170 Nicotiana tabacum
Nitab4.5_0013389g0010 Nicotiana tabacum
Nn8g39096 Nelumbo nucifera
Oeu053166.1 Olea europaea
Oeu064192.1 Olea europaea
Oeu064194.1 Olea europaea
Os01g0744400 Oryza sativa ssp. japonica
Peaxi162Scf00665g00331 Petunia axillaris
PGR102G0995 Punica granatum
PGR102G1041 Punica granatum
Phvul.004G170300 Phaseolus vulgaris
Potri.006G164350 Populus trichocarpa
Potri.018G086600 Populus trichocarpa
PRCOL_00000913 Prasinoderma coloniale
Prupe.7G221400 Prunus persica
Psat1g046640 Pisum sativum
PSO210G3171 Papaver somniferum
PSO210G4150 Papaver somniferum
QL02p042072 Quercus lobata
RcHm_v2.0_Chr2g0091661 Rosa chinensis
Rhsim05G0040900 Rhododendron simsii
Sabra18G0074900 Salix brachista
SalBow3G4580 Salvia bowleyana
Sc08g0007920 Simmondsia chinensis
Sc08g0007940 Simmondsia chinensis
Sed0011847 Sechium edule
SEGI_40884 Sequoiadendron giganteum
SGA_v2.0_scaffold129G34191 Striga asiatica
SHI02696 Sapria himalayana
SMO140G0037 Selaginella moellendorffii
SMO356G0242 Selaginella moellendorffii
Solyc12g008390.3 Solanum lycopersicum
Sopen12g003350 Solanum pennellii
Sp3g33270 Schrenkiella parvula
TAR624G1325 Trochodendron aralioides
THA.LOC104820040 Tarenaya hassleriana
Thecc.09G101900 Theobroma cacao
Thhalv10001922m.g Eutrema salsugineum
TPR.G21387 Trifolium pratense
TWI34G0799 Tripterygium wilfordii
unitig_899.g15433 Utricularia gibba
vmacro10859 Vaccinium macrocarpon
VMungo0464G1472 Vigna mungo
Zm00001eb153530 Zea mays
Zm00001eb371090 Zea mays

User provided reference genes

Program Settings