Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p04370 Brassica napus
A10p19460 Brassica napus
A10p21790 Brassica napus
Aa31LG11G12020 Aethionema arabicum
Actinidia05827 Actinidia chinensis
Actinidia31738 Actinidia chinensis
AL6G28710 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea
AT5G17620 Arabidopsis thaliana
ATR0736G160 Amborella trichopoda
Atru.chr13.1412 Acer truncatum
AUR62004320 Chenopodium quinoa
AUR62033324 Chenopodium quinoa
AUR62033335 Chenopodium quinoa
BcaB08g36758 Brassica carinata
BcaC03g13531 Brassica carinata
BcaC04g18774 Brassica carinata
BolC2t06830H Brassica oleracea
BolC9t58793H Brassica oleracea
BraA02t05401Z Brassica rapa
BraA10t44239Z Brassica rapa
C02p09220 Brassica napus
C09p59550 Brassica napus
CAN.G992.14 Capsicum annuum
CANSAT78G0548 Cannabis sativa
CARHR195560 Cardamine hirsuta
Carub.0006s1586 Capsella rubella
Ca_04019_v3 Cicer arietinum L.
CBR_g5742 Chara braunii
Cc00_g12630 Coffea canephora
CDE08G1003 Ceratophyllum demersum
Cfa001833 Carpinus fangiana
Cfa003690 Carpinus fangiana
Ciclev10032078m.g Citrus clementina
CiPaw.12G019400 Carya illinoinensis
ClCG05G002520 Citrullus lanatus
COL.COLO4_28409 Corchorus olitorius
Cpa.g.sc73.74 Carica papaya
CsaV3_3G009970 Cucumis sativus L.
CSS0005411 Camellia sinensis var. sinensis
CSS0029990 Camellia sinensis var. sinensis
CSS0030130 Camellia sinensis var. sinensis
CSS0035749 Camellia sinensis var. sinensis
CSS0038619 Camellia sinensis var. sinensis
CSS0040869 Camellia sinensis var. sinensis
DCAR_025006 Daucus carota
Dinv43526 Davidia involucrata
Duzib106G1834 Durio zibethinus
Duzib106G2041 Durio zibethinus
ECA248G0203 Erigeron canadensis
EL10Ac1g00530 Beta vulgaris
Eucgr.E01755 Eucalyptus grandis
FAN06G2294 Fragaria x ananassa
FAN10G0570 Fragaria x ananassa
FAN16G0129 Fragaria x ananassa
FAN21G3783 Fragaria x ananassa
FAN25G2123 Fragaria x ananassa
FAN25G2538 Fragaria x ananassa
FvH4_3g28610 Fragaria vesca
FvH4_7g07660 Fragaria vesca
Glyma.01G118200 Glycine max
Glyma.03G055200 Glycine max
Glyma.U006202 Glycine max
Gohir.A08G221606 Gossypium hirsutum
Gohir.D08G238633 Gossypium hirsutum
Gorai.004G254100 Gossypium raimondii
GSVIVG01019237001 Vitis vinifera
HanXRQChr01g0019801 Helianthus annuus
HanXRQChr11g0343751 Helianthus annuus
HanXRQChr13g0409351 Helianthus annuus
Haze_15797 Corylus avellana
Haze_15798 Corylus avellana
Haze_16727 Corylus avellana
Haze_16728 Corylus avellana
Haze_25407 Corylus avellana
Haze_25412 Corylus avellana
HPP92_018030 Vanilla planifolia
Hund27300 Selenicereus undatus
Lalb_Chr07g0191411 Lupinus albus
Lj3g0001477 Lotus japonicus
Lj7A559T94 Lonicera japonica
Lsat_1_v5_gn_1_89980 Lactuca sativa
Manes.08G157300 Manihot esculenta
Mapoly0042s0051 Marchantia polymorpha
MBI07_g00286_MAGBIO Magnolia biondii
MD02G1233500 Malus domestica
MD02G1233800 Malus domestica
MD02G1233900 Malus domestica
MD02G1234000 Malus domestica
MD02G1235300 Malus domestica
MD07G1080100 Malus domestica
MD09G1234100 Malus domestica
Medtr4g017150 Medicago truncatula
Medtr5g046460 Medicago truncatula
Medtr5g046560 Medicago truncatula
Medtr6g049240 Medicago truncatula
MELO3C006218.2 Cucumis melo
Migut.N01676 Erythranthe guttata
Migut.O00822 Erythranthe guttata
MSTRG.4986 Avicennia marina
Nitab4.5_0000792g0040 Nicotiana tabacum
Nitab4.5_0012495g0010 Nicotiana tabacum
Nn7g36866 Nelumbo nucifera
Oeu041518.1 Olea europaea
Os01g0869500 Oryza sativa ssp. japonica
Peaxi162Scf00040g00102 Petunia axillaris
Peaxi162Scf00040g00103 Petunia axillaris
Peaxi162Scf00907g00220 Petunia axillaris
PGR042G2637 Punica granatum
PGSC0003DMG400001780 Solanum tuberosum
Phvul.010G078100 Phaseolus vulgaris
Potri.013G072300 Populus trichocarpa
Potri.019G044100 Populus trichocarpa
Pp3c21_22490 Physcomitrium patens
Prupe.2G104100 Prunus persica
Psat0s3493g0040 Pisum sativum
PSO170G6334 Papaver somniferum
PSO782G4616 Papaver somniferum
QL04p053109 Quercus lobata
RcHm_v2.0_Chr1g0342701 Rosa chinensis
RcHm_v2.0_Chr1g0342751 Rosa chinensis
RcHm_v2.0_Chr2g0157591 Rosa chinensis
RcHm_v2.0_Chr3g0469881 Rosa chinensis
Rhsim07G0047000 Rhododendron simsii
Rhsim07G0125200 Rhododendron simsii
Sabra13G0062300 Salix brachista
SalBow4G2429 Salvia bowleyana
Sc26g0000980 Simmondsia chinensis
Sed0016930 Sechium edule
SEGI_12813 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28749 Striga asiatica
SHI14405 Sapria himalayana
SHI14408 Sapria himalayana
SMO266G0007 Selaginella moellendorffii
Solyc01g081380.4 Solanum lycopersicum
Sopen01g032950 Solanum pennellii
Sp6g26600 Schrenkiella parvula
TAR633G0902 Trochodendron aralioides
TAR636G0699 Trochodendron aralioides
TAR636G1618 Trochodendron aralioides
TAR636G1741 Trochodendron aralioides
THA.LOC104802894 Tarenaya hassleriana
THA.LOC104821152 Tarenaya hassleriana
Thecc.05G233500 Theobroma cacao
Thhalv10014088m.g Eutrema salsugineum
TPR.G14295 Trifolium pratense
TPR.G40218 Trifolium pratense
TPR.G9231 Trifolium pratense
TWI32G0329 Tripterygium wilfordii
TWI32G0950 Tripterygium wilfordii
TWI34G1657 Tripterygium wilfordii
unitig_61.g26200 Utricularia gibba
vmacro13592 Vaccinium macrocarpon
VMungo0331G1733 Vigna mungo
Zm00001eb172120 Zea mays

User provided reference genes

Program Settings