Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18310 Brassica napus
A04p25280 Brassica napus
A10p31820 Brassica napus
Aa31LG5G4410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2912 Anthoceros agrestis
Actinidia11419 Actinidia chinensis
Ah.11g041390 Amaranthus hybridus
AL4G28200 Arabidopsis lyrata
Aqoxy2G00031 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ENCW2M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R808EC Arachis hypogaea
AT2G32760 Arabidopsis thaliana
ATR1096G138 Amborella trichopoda
Atru.chr4.1674 Acer truncatum
AUR62018590 Chenopodium quinoa
AUR62020829 Chenopodium quinoa
BcaB01g01629 Brassica carinata
BcaB06g28632 Brassica carinata
BcaC02g07886 Brassica carinata
BcaC02g08439 Brassica carinata
BcaC08g43547 Brassica carinata
BcaNung06790 Brassica carinata
BolC3t14519H Brassica oleracea
BolC4t26969H Brassica oleracea
BolC4t27707H Brassica oleracea
BolC6t36015H Brassica oleracea
BraA03t11091Z Brassica rapa
BraA04t18031Z Brassica rapa
BraA10t45227Z Brassica rapa
C03p21360 Brassica napus
C04p54180 Brassica napus
C08p00860 Brassica napus
CAN.G1333.13 Capsicum annuum
CANSAT78G1841 Cannabis sativa
CARHR126650 Cardamine hirsuta
Carub.0004s1412 Capsella rubella
Ca_17968_v3 Cicer arietinum L.
Cc03_g07940 Coffea canephora
CDE08G1272 Ceratophyllum demersum
CDE09G0489 Ceratophyllum demersum
CDE09G1401 Ceratophyllum demersum
Cfa014938 Carpinus fangiana
Cfa023794 Carpinus fangiana
Ciclev10005271m.g Citrus clementina
CiPaw.01G120200 Carya illinoinensis
ClCG06G007870 Citrullus lanatus
COL.COLO4_20166 Corchorus olitorius
Cpa.g.sc173.8 Carica papaya
Cpa.g.sc173.9 Carica papaya
Cpa.g.sc443.1 Carica papaya
CsaV3_2G011600 Cucumis sativus L.
DCAR_001940 Daucus carota
DCAR_012442 Daucus carota
DCAR_012443 Daucus carota
Dinv27224 Davidia involucrata
Dinv38218 Davidia involucrata
Duzib151G0803 Durio zibethinus
Duzib212G0483 Durio zibethinus
Duzib212G1026 Durio zibethinus
ECA233G3015 Erigeron canadensis
EL10Ac4g09020 Beta vulgaris
EL10Ac4g09026 Beta vulgaris
Eucgr.H02773 Eucalyptus grandis
FAN07G1054 Fragaria x ananassa
FAN12G3502 Fragaria x ananassa
FAN16G2719 Fragaria x ananassa
FAN17G0447 Fragaria x ananassa
FAN22G1791 Fragaria x ananassa
FvH4_4g13790 Fragaria vesca
Glyma.05G154100 Glycine max
Glyma.08G111900 Glycine max
Gohir.A02G021300 Gossypium hirsutum
Gohir.A09G205700 Gossypium hirsutum
Gohir.D02G025500 Gossypium hirsutum
Gohir.D02G025833 Gossypium hirsutum
Gohir.D02G025900 Gossypium hirsutum
Gohir.D02G026860 Gossypium hirsutum
Gohir.D02G027400 Gossypium hirsutum
Gohir.D02G027800 Gossypium hirsutum
Gohir.D09G199300 Gossypium hirsutum
Gorai.005G031400 Gossypium raimondii
Gorai.006G223000 Gossypium raimondii
GSVIVG01020907001 Vitis vinifera
HanXRQChr02g0059021 Helianthus annuus
HanXRQChr10g0277641 Helianthus annuus
HanXRQChr16g0497991 Helianthus annuus
Haze_11622 Corylus avellana
Hma1.2p1_0187F.1_g082340 Hydrangea macrophylla
HPP92_017061 Vanilla planifolia
Hund18995 Selenicereus undatus
Lalb_Chr07g0186731 Lupinus albus
Lalb_Chr21g0313021 Lupinus albus
Lalb_Chr21g0313031 Lupinus albus
Lj3A407G37 Lonicera japonica
Lj3C404T0 Lonicera japonica
Lj4g0012954 Lotus japonicus
Lsat_1_v5_gn_2_46161 Lactuca sativa
Lsat_1_v5_gn_6_61160 Lactuca sativa
Lsat_1_v5_gn_6_61180 Lactuca sativa
Manes.15G054600 Manihot esculenta
Mapoly0173s0024 Marchantia polymorpha
MBI19_g24366_MAGBIO Magnolia biondii
MBI19_g24734_MAGBIO Magnolia biondii
MCO09G655 Micromonas commoda
MD00G1113200 Malus domestica
MD04G1010600 Malus domestica
Medtr8g085350 Medicago truncatula
MELO3C020442.2 Cucumis melo
Migut.N00400 Erythranthe guttata
MSTRG.24610 Avicennia marina
Nitab4.5_0000401g0030 Nicotiana tabacum
Nitab4.5_0006210g0070 Nicotiana tabacum
Nn3g19571 Nelumbo nucifera
Nn3g19999 Nelumbo nucifera
Oeu006194.1 Olea europaea
Oeu006195.1 Olea europaea
Oeu008667.1 Olea europaea
Oeu013809.1 Olea europaea
Os05g0490500 Oryza sativa ssp. japonica
Os06g0715000 Oryza sativa ssp. japonica
Peaxi162Scf00047g00420 Petunia axillaris
Peaxi162Scf00753g00331 Petunia axillaris
Peaxi162Scf61983g00004 Petunia axillaris
PGR083G2076 Punica granatum
PGSC0003DMG400026426 Solanum tuberosum
Phvul.003G290900 Phaseolus vulgaris
Potri.017G056800 Populus trichocarpa
Pp3c14_26480 Physcomitrium patens
Prupe.1G010300 Prunus persica
Psat7g074240 Pisum sativum
PSO339G2282 Papaver somniferum
PSO384G1658 Papaver somniferum
QL06p025411 Quercus lobata
RcHm_v2.0_Chr4g0414711 Rosa chinensis
Rhsim02G0059000 Rhododendron simsii
Sabra17G0048500 Salix brachista
Sabra17G0050200 Salix brachista
SalBow3G0632 Salvia bowleyana
Sc19g0007180 Simmondsia chinensis
Sed0016107 Sechium edule
Sed0019182 Sechium edule
SEGI_24214 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12588 Striga asiatica
SMO334G0086 Selaginella moellendorffii
Solyc09g092030.4 Solanum lycopersicum
Sopen09g034910 Solanum pennellii
Sp4g15100 Schrenkiella parvula
TAR362G0107 Trochodendron aralioides
THA.LOC104826120 Tarenaya hassleriana
Thecc.04G200900 Theobroma cacao
Thhalv10016939m.g Eutrema salsugineum
TPR.G11944 Trifolium pratense
TWI09G0568 Tripterygium wilfordii
TWI73G1291 Tripterygium wilfordii
unitig_8.g4998 Utricularia gibba
vmacro15546 Vaccinium macrocarpon
VMungo0251G0011 Vigna mungo
VMungo0251G0179 Vigna mungo
Zm00001eb291290 Zea mays
Zm00001eb405320 Zea mays

User provided reference genes

Program Settings