Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04140 Brassica napus
Aa31LG2G16850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2403 Anthoceros agrestis
Actinidia00401 Actinidia chinensis
Actinidia27975 Actinidia chinensis
Actinidia34390 Actinidia chinensis
Actinidia34391 Actinidia chinensis
Ah.01g010900 Amaranthus hybridus
Ah.01g018390 Amaranthus hybridus
AL7G17000 Arabidopsis lyrata
Aqoxy5G01130 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5RC8JY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PGW4NS Arachis hypogaea
AT4G34270 Arabidopsis thaliana
ATR0661G316 Amborella trichopoda
Atru.chr12.2105 Acer truncatum
Atru.chr13.2259 Acer truncatum
Atru.chr3.1909 Acer truncatum
Atru.chr5.2445 Acer truncatum
Atru.chr7.688 Acer truncatum
AUR62010332 Chenopodium quinoa
AUR62039053 Chenopodium quinoa
BcaC01g03137 Brassica carinata
BcaC08g44162 Brassica carinata
BcaNung04162 Brassica carinata
BcaNung04988 Brassica carinata
BcaNung04989 Brassica carinata
BolC1t00437H Brassica oleracea
BolC3t17849H Brassica oleracea
BraA01t00403Z Brassica rapa
C01p04510 Brassica napus
C03p55700 Brassica napus
CAN.G606.21 Capsicum annuum
CANSAT25G2190 Cannabis sativa
CANSAT25G3441 Cannabis sativa
CARHR242510 Cardamine hirsuta
Carub.0007s0609 Capsella rubella
Ca_11058_v3 Cicer arietinum L.
CBR_g36716 Chara braunii
Cc01_g02920 Coffea canephora
Cc02_g19430 Coffea canephora
Cc02_g34080 Coffea canephora
CDE02G3699 Ceratophyllum demersum
Cfa002003 Carpinus fangiana
Cfa004607 Carpinus fangiana
Cfa005651 Carpinus fangiana
Cfa017289 Carpinus fangiana
Cfa024874 Carpinus fangiana
Ciclev10028970m.g Citrus clementina
CiPaw.05G013400 Carya illinoinensis
CiPaw.06G168400 Carya illinoinensis
ClCG02G006560 Citrullus lanatus
Cpa.g.sc106.118 Carica papaya
Cre17.g734150 Chlamydomonas reinhardtii
CsaV3_7G008050 Cucumis sativus L.
CSS0002878 Camellia sinensis var. sinensis
CSS0003948 Camellia sinensis var. sinensis
CSS0013759 Camellia sinensis var. sinensis
CSS0015264 Camellia sinensis var. sinensis
CSS0037652 Camellia sinensis var. sinensis
DCAR_021976 Daucus carota
Duzib052G1089 Durio zibethinus
ECA234G2632 Erigeron canadensis
EL10Ac9g22252 Beta vulgaris
Eucgr.I01088 Eucalyptus grandis
FAN15G0583 Fragaria x ananassa
FAN20G2321 Fragaria x ananassa
FAN24G0473 Fragaria x ananassa
FAN27G3202 Fragaria x ananassa
FvH4_2g04780 Fragaria vesca
Glyma.10G260500 Glycine max
Glyma.20G130700 Glycine max
Gohir.A12G021100 Gossypium hirsutum
Gohir.D12G021400 Gossypium hirsutum
Gorai.008G021700 Gossypium raimondii
GSVIVG01003244001 Vitis vinifera
GSVIVG01003443001 Vitis vinifera
GSVIVG01030751001 Vitis vinifera
GSVIVG01030757001 Vitis vinifera
GSVIVG01037896001 Vitis vinifera
HanXRQChr04g0105981 Helianthus annuus
Haze_10202 Corylus avellana
Hma1.2p1_1023F.1_g248990 Hydrangea macrophylla
Hma1.2p1_1023F.1_g249000 Hydrangea macrophylla
HPP92_010143 Vanilla planifolia
Hund00159 Selenicereus undatus
Hund06305 Selenicereus undatus
Lalb_Chr02g0145211 Lupinus albus
Lalb_Chr21g0308241 Lupinus albus
Lj5A215G63 Lonicera japonica
Lj5g0012751 Lotus japonicus
Lsat_1_v5_gn_5_116421 Lactuca sativa
Lsat_1_v5_gn_5_116521 Lactuca sativa
Manes.07G066500 Manihot esculenta
Mapoly0064s0080 Marchantia polymorpha
MCO13G563 Micromonas commoda
MD00G1108700 Malus domestica
MD00G1108800 Malus domestica
MD10G1100100 Malus domestica
Medtr1g107045 Medicago truncatula
MELO3C018500.2 Cucumis melo
Migut.B00402 Erythranthe guttata
MSTRG.20195 Avicennia marina
Nitab4.5_0001480g0100 Nicotiana tabacum
Nitab4.5_0002647g0020 Nicotiana tabacum
Nitab4.5_0003699g0050 Nicotiana tabacum
Nn1g04655 Nelumbo nucifera
Nn5g30459 Nelumbo nucifera
Oeu037260.1 Olea europaea
Os03g0760600 Oryza sativa ssp. japonica
Peaxi162Scf00003g02548 Petunia axillaris
Peaxi162Scf00016g02527 Petunia axillaris
PGR142G4205 Punica granatum
PGSC0003DMG400023263 Solanum tuberosum
PGSC0003DMG400025761 Solanum tuberosum
Phvul.007G041700 Phaseolus vulgaris
Potri.001G298500 Populus trichocarpa
Potri.009G093200 Populus trichocarpa
Pp3c10_18670 Physcomitrium patens
PRCOL_00000955 Prasinoderma coloniale
PRCOL_00004768 Prasinoderma coloniale
Prupe.8G137600 Prunus persica
Psat6g216600 Pisum sativum
PSO170G4403 Papaver somniferum
PSO210G1902 Papaver somniferum
QL11p032653 Quercus lobata
RcHm_v2.0_Chr6g0254491 Rosa chinensis
RcHm_v2.0_Chr6g0257511 Rosa chinensis
RcHm_v2.0_Chr6g0257521 Rosa chinensis
Rhsim11G0156300 Rhododendron simsii
Rhsim11G0157800 Rhododendron simsii
Sabra09G0071800 Salix brachista
SalBow6G4388 Salvia bowleyana
SalBow6G4779 Salvia bowleyana
Sc18g0005550 Simmondsia chinensis
Sed0018810 Sechium edule
Sed0023236 Sechium edule
SEGI_10030 Sequoiadendron giganteum
SGA_v2.0_scaffold225G42995 Striga asiatica
SHI05271 Sapria himalayana
SMO361G0327 Selaginella moellendorffii
Solyc01g107420.2 Solanum lycopersicum
Solyc10g049850.3 Solanum lycopersicum
Sopen01g049660 Solanum pennellii
Sopen01g049670 Solanum pennellii
Sopen10g019880 Solanum pennellii
Sp7g32060 Schrenkiella parvula
TAR376G0836 Trochodendron aralioides
TAR628G0287 Trochodendron aralioides
THA.LOC104807234 Tarenaya hassleriana
THA.LOC104819549 Tarenaya hassleriana
Thecc.02G111500 Theobroma cacao
Thhalv10025895m.g Eutrema salsugineum
TPR.G27083 Trifolium pratense
TWI75G0922 Tripterygium wilfordii
TWI79G1728 Tripterygium wilfordii
unitig_0.g879 Utricularia gibba
vmacro01990 Vaccinium macrocarpon
VMungo0720G1503 Vigna mungo
Zm00001eb214380 Zea mays

User provided reference genes

Program Settings