Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p43310 Brassica napus
A09p24080 Brassica napus
Aa31LG2G7330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis
Actinidia21652 Actinidia chinensis
Actinidia21882 Actinidia chinensis
Ah.15g094320 Amaranthus hybridus
AL5G12650 Arabidopsis lyrata
Aqoxy377s002 Aquilegia oxysepala
Aqoxy7G02788 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea
AT2G03070 Arabidopsis thaliana
ATR0626G211 Amborella trichopoda
Atru.chr1.2695 Acer truncatum
AUR62001343 Chenopodium quinoa
AUR62025661 Chenopodium quinoa
BcaB07g30687 Brassica carinata
BcaC04g21507 Brassica carinata
BcaC06g31203 Brassica carinata
BcaC06g34021 Brassica carinata
BolC4t23053H Brassica oleracea
BolC7t43874H Brassica oleracea
BolC9t55955H Brassica oleracea
BraA06t27217Z Brassica rapa
BraA09t38008Z Brassica rapa
C04p14790 Brassica napus
C07p33640 Brassica napus
C09p30960 Brassica napus
CAN.G790.12 Capsicum annuum
CANSAT78G0411 Cannabis sativa
CARHR145470 Cardamine hirsuta
CARHR213680 Cardamine hirsuta
Carub.0005s0192 Capsella rubella
Ca_04816_v3 Cicer arietinum L.
Ca_21726_v3 Cicer arietinum L.
CBR_g41305 Chara braunii
Cc04_g00200 Coffea canephora
CDE02G4004 Ceratophyllum demersum
Cfa002151 Carpinus fangiana
Ciclev10025265m.g Citrus clementina
CiPaw.01G090700 Carya illinoinensis
ClCG07G014640 Citrullus lanatus
COL.COLO4_18371 Corchorus olitorius
COL.COLO4_27264 Corchorus olitorius
COL.COLO4_31168 Corchorus olitorius
Cpa.g.sc1515.1 Carica papaya
Cpa.g.sc1515.2 Carica papaya
Cpa.g.sc155.18 Carica papaya
Cre04.g225700 Chlamydomonas reinhardtii
CsaV3_3G030520 Cucumis sativus L.
CSS0019442 Camellia sinensis var. sinensis
DCAR_030619 Daucus carota
DCAR_030620 Daucus carota
Dinv09182 Davidia involucrata
Dinv37782 Davidia involucrata
Dinv37783 Davidia involucrata
Duzib192G0061 Durio zibethinus
EL10Ac7g18162 Beta vulgaris
Eucgr.J03177 Eucalyptus grandis
FAN17G0751 Fragaria x ananassa
FAN22G0181 Fragaria x ananassa
FvH4_4g04880 Fragaria vesca
Glyma.12G188300 Glycine max
Glyma.13G372700 Glycine max
Gohir.A01G221776 Gossypium hirsutum
Gohir.A06G118600 Gossypium hirsutum
Gohir.D06G122500 Gossypium hirsutum
Gorai.010G142700 Gossypium raimondii
GSVIVG01029540001 Vitis vinifera
HanXRQChr12g0359691 Helianthus annuus
Haze_16261 Corylus avellana
Haze_16264 Corylus avellana
Haze_18674 Corylus avellana
Hma1.2p1_0370F.1_g138010 Hydrangea macrophylla
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla
HPP92_008247 Vanilla planifolia
Hund18598 Selenicereus undatus
Hund18609 Selenicereus undatus
Lj3g0018425 Lotus japonicus
Lj5C22T9 Lonicera japonica
Lj6C65T2 Lonicera japonica
Lsat_1_v5_gn_5_137281 Lactuca sativa
Manes.06G177300 Manihot esculenta
Mapoly0029s0023 Marchantia polymorpha
MBI13_g01743_MAGBIO Magnolia biondii
MBI13_g34036_MAGBIO Magnolia biondii
MD16G1227300 Malus domestica
Medtr5g013930 Medicago truncatula
MELO3C026710.2 Cucumis melo
Migut.I01194 Erythranthe guttata
MSTRG.10879 Avicennia marina
Nitab4.5_0002664g0040 Nicotiana tabacum
Nitab4.5_0004918g0010 Nicotiana tabacum
Nitab4.5_0005664g0060 Nicotiana tabacum
Nitab4.5_0005739g0060 Nicotiana tabacum
Nn7g37005 Nelumbo nucifera
Oeu049641.1 Olea europaea
Oeu062492.1 Olea europaea
Os03g0423800 Oryza sativa ssp. japonica
Peaxi162Scf00038g02640 Petunia axillaris
Peaxi162Scf00038g02656 Petunia axillaris
PGR119G2289 Punica granatum
PGSC0003DMG400009164 Solanum tuberosum
Phvul.005G185100 Phaseolus vulgaris
Potri.010G253100 Populus trichocarpa
Pp3c18_4030 Physcomitrium patens
Prupe.1G049400 Prunus persica
Psat0s1762g0040 Pisum sativum
Psat1g118080 Pisum sativum
Psat3g175600 Pisum sativum
Psat5g288040 Pisum sativum
Psat7g008520 Pisum sativum
PSO063G0217 Papaver somniferum
PSO170G2367 Papaver somniferum
PSO384G0383 Papaver somniferum
PSO836G0001 Papaver somniferum
QL03p033126 Quercus lobata
QL03p033134 Quercus lobata
QL05p046913 Quercus lobata
QL05p084035 Quercus lobata
QL08p038027 Quercus lobata
RcHm_v2.0_Chr4g0395701 Rosa chinensis
RcHm_v2.0_Chr4g0395721 Rosa chinensis
Rhsim08G0249800 Rhododendron simsii
Sabra10G0196900 Salix brachista
SalBow6G0079 Salvia bowleyana
Sc12g0011150 Simmondsia chinensis
Sed0022371 Sechium edule
SEGI_11469 Sequoiadendron giganteum
SEGI_18721 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33268 Striga asiatica
SGA_v2.0_scaffold71G23993 Striga asiatica
SHI24407 Sapria himalayana
SHI31115 Sapria himalayana
SHI31116 Sapria himalayana
SHI34972 Sapria himalayana
SHI35501 Sapria himalayana
SHI36675 Sapria himalayana
SHI37441 Sapria himalayana
SHI42601 Sapria himalayana
SHI42840 Sapria himalayana
SHI42976 Sapria himalayana
SHI49595 Sapria himalayana
SHI50578 Sapria himalayana
SMO114G0145 Selaginella moellendorffii
Solyc03g123960.3 Solanum lycopersicum
Sopen03g041690 Solanum pennellii
Sp2g14070 Schrenkiella parvula
TAR626G0959 Trochodendron aralioides
THA.LOC104800314 Tarenaya hassleriana
Thecc.06G058800 Theobroma cacao
Thhalv10004003m.g Eutrema salsugineum
TPR.G5557 Trifolium pratense
TWI09G1491 Tripterygium wilfordii
unitig_748.g8028 Utricularia gibba
vmacro18747 Vaccinium macrocarpon
VMungo1080G0276 Vigna mungo
Zm00001eb320420 Zea mays

User provided reference genes

Program Settings