Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01470 Brassica napus
Aa31LG10G14990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.35 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.164 Anthoceros agrestis
Actinidia12201 Actinidia chinensis
Actinidia12243 Actinidia chinensis
Ah.05g174780 Amaranthus hybridus
AL2G22100 Arabidopsis lyrata
AL5G43050 Arabidopsis lyrata
Aqoxy7G00707 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MXE7NW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R3KQ80 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W3JVU2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZTQI5E Arachis hypogaea
AT3G60740 Arabidopsis thaliana
ATR0829G158 Amborella trichopoda
Atru.chr5.277 Acer truncatum
AUR62004186 Chenopodium quinoa
AUR62013659 Chenopodium quinoa
AUR62044220 Chenopodium quinoa
AUR62044221 Chenopodium quinoa
BcaC02g10175 Brassica carinata
BolC4t24748H Brassica oleracea
BraA04t15865Z Brassica rapa
C04p31950 Brassica napus
CAN.G433.8 Capsicum annuum
CAN.G433.9 Capsicum annuum
CAN.G911.6 Capsicum annuum
CARHR171130 Cardamine hirsuta
CARHR186390 Cardamine hirsuta
CARHR186400 Cardamine hirsuta
CARHR186410 Cardamine hirsuta
CARHR186420 Cardamine hirsuta
CARHR186540 Cardamine hirsuta
Carub.0002s1114 Capsella rubella
Carub.0002s1115 Capsella rubella
Carub.0005s2747 Capsella rubella
Ca_25666_v3 Cicer arietinum L.
CBR_g24365 Chara braunii
Cc02_g24170 Coffea canephora
Cc05_g02990 Coffea canephora
CDE04G0827 Ceratophyllum demersum
CDE12G0470 Ceratophyllum demersum
Cfa011194 Carpinus fangiana
Cfa025481 Carpinus fangiana
Ciclev10018542m.g Citrus clementina
CiPaw.14G027200 Carya illinoinensis
ClCG06G000530 Citrullus lanatus
COL.COLO4_12522 Corchorus olitorius
Cpa.g.sc145.17 Carica papaya
Cre12.g490250 Chlamydomonas reinhardtii
CsaV3_6G006310 Cucumis sativus L.
CSS0018497 Camellia sinensis var. sinensis
DCAR_015895 Daucus carota
Dinv43687 Davidia involucrata
Dinv43688 Davidia involucrata
Duzib213G0292 Durio zibethinus
Duzib213G0739 Durio zibethinus
ECA236G4615 Erigeron canadensis
EL10Ac1g00864 Beta vulgaris
Eucgr.E01450 Eucalyptus grandis
FAN03G2702 Fragaria x ananassa
FAN06G3638 Fragaria x ananassa
FAN10G0184 Fragaria x ananassa
FvH4_7g07690 Fragaria vesca
Glyma.10G279100 Glycine max
Glyma.20G110600 Glycine max
Gohir.A02G122601 Gossypium hirsutum
Gohir.A02G126001 Gossypium hirsutum
Gohir.A04G045800 Gossypium hirsutum
Gohir.A04G047850 Gossypium hirsutum
Gohir.A05G315500 Gossypium hirsutum
Gohir.D05G336900 Gossypium hirsutum
Gorai.009G361000 Gossypium raimondii
GSVIVG01003802001 Vitis vinifera
GSVIVG01027657001 Vitis vinifera
GSVIVG01029808001 Vitis vinifera
GSVIVG01029815001 Vitis vinifera
HanXRQChr04g0122511 Helianthus annuus
Haze_02651 Corylus avellana
Haze_02652 Corylus avellana
Haze_02653 Corylus avellana
HPP92_014468 Vanilla planifolia
Hund27372 Selenicereus undatus
Lalb_Chr02g0146291 Lupinus albus
Lj5g0020792 Lotus japonicus
Lj9C568G3 Lonicera japonica
Lj9C568T10 Lonicera japonica
Lsat_1_v5_gn_7_9321 Lactuca sativa
Manes.05G047400 Manihot esculenta
Manes.05G127200 Manihot esculenta
Mapoly0039s0061 Marchantia polymorpha
MBI04_g11448_MAGBIO Magnolia biondii
MCO09G490 Micromonas commoda
MD02G1313300 Malus domestica
MD07G1008800 Malus domestica
MD07G1009100 Malus domestica
Medtr1g112130 Medicago truncatula
MELO3C022488.2 Cucumis melo
Migut.N01621 Erythranthe guttata
MSTRG.4901 Avicennia marina
Nitab4.5_0000252g0220 Nicotiana tabacum
Nitab4.5_0000457g0060 Nicotiana tabacum
Nitab4.5_0010730g0030 Nicotiana tabacum
Nn6g34058 Nelumbo nucifera
Oeu064473.1 Olea europaea
Os10g0508500 Oryza sativa ssp. japonica
Peaxi162Scf00003g02040 Petunia axillaris
Peaxi162Scf00003g02046 Petunia axillaris
Peaxi162Scf00013g02923 Petunia axillaris
Peaxi162Scf00013g02924 Petunia axillaris
PGR042G4004 Punica granatum
PGSC0003DMG400025966 Solanum tuberosum
Phvul.007G022200 Phaseolus vulgaris
Potri.002G145750 Populus trichocarpa
Potri.014G067400 Populus trichocarpa
Pp3c2_18070 Physcomitrium patens
PRCOL_00002890 Prasinoderma coloniale
Prupe.2G141700 Prunus persica
Psat6g230960 Pisum sativum
PSO782G0861 Papaver somniferum
QL04p040018 Quercus lobata
QL04p040032 Quercus lobata
RcHm_v2.0_Chr1g0342581 Rosa chinensis
Rhsim07G0029300 Rhododendron simsii
Sabra14G0047400 Salix brachista
SalBow5G5434 Salvia bowleyana
Sc02g0002670 Simmondsia chinensis
Sed0027727 Sechium edule
SEGI_05829 Sequoiadendron giganteum
SEGI_22928 Sequoiadendron giganteum
SEGI_29392 Sequoiadendron giganteum
SEGI_40120 Sequoiadendron giganteum
SGA_v2.0_scaffold43G16502 Striga asiatica
SHI07794 Sapria himalayana
SHI13530 Sapria himalayana
SHI25190 Sapria himalayana
SHI33403 Sapria himalayana
SHI33404 Sapria himalayana
SMO147G0207 Selaginella moellendorffii
SMO174G0054 Selaginella moellendorffii
Solyc01g091080.3 Solanum lycopersicum
Solyc01g091090.4 Solanum lycopersicum
Sopen01g036830 Solanum pennellii
Sp5g02510 Schrenkiella parvula
TAR629G2829 Trochodendron aralioides
THA.LOC104810193 Tarenaya hassleriana
THA.LOC104827612 Tarenaya hassleriana
Thecc.01G379300 Theobroma cacao
Thhalv10005754m.g Eutrema salsugineum
TPR.G2420 Trifolium pratense
TWI14G0271 Tripterygium wilfordii
TWI14G0506 Tripterygium wilfordii
TWI14G0849 Tripterygium wilfordii
TWI14G1129 Tripterygium wilfordii
TWI59G0724 Tripterygium wilfordii
unitig_32.g11469 Utricularia gibba
vmacro13419 Vaccinium macrocarpon
VMungo0720G2491 Vigna mungo
Zm00001eb220640 Zea mays

User provided reference genes

Program Settings