Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p02790 Brassica napus
A05p02740 Brassica napus
Aa31LG10G12710 Aethionema arabicum
Aa31LG1G24090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3345 Anthoceros agrestis
Actinidia17270 Actinidia chinensis
Actinidia38580 Actinidia chinensis
Ah.04g152460 Amaranthus hybridus
AL4G40500 Arabidopsis lyrata
AL5G39660 Arabidopsis lyrata
Aqoxy2G00079 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I8NV4T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q7TVYL Arachis hypogaea
AT2G42130 Arabidopsis thaliana
AT3G58010 Arabidopsis thaliana
ATR0605G151 Amborella trichopoda
Atru.chr4.507 Acer truncatum
Atru.chr8.1110 Acer truncatum
AUR62012033 Chenopodium quinoa
AUR62015371 Chenopodium quinoa
BcaB02g08282 Brassica carinata
BcaB04g18512 Brassica carinata
BcaB08g34564 Brassica carinata
BcaC02g09981 Brassica carinata
BcaC02g12461 Brassica carinata
BcaNung04406 Brassica carinata
BolC4t21967H Brassica oleracea
BolC4t24999H Brassica oleracea
BraA04t16003Z Brassica rapa
BraA05t19266Z Brassica rapa
C04p03280 Brassica napus
C04p34370 Brassica napus
CAN.G128.40 Capsicum annuum
CAN.G570.5 Capsicum annuum
CANSAT64G2813 Cannabis sativa
CARHR137190 Cardamine hirsuta
CARHR168330 Cardamine hirsuta
Carub.0004s2447 Capsella rubella
Carub.0005s2485 Capsella rubella
Ca_12079_v3 Cicer arietinum L.
CBR_g20312 Chara braunii
Cc06_g15950 Coffea canephora
CDE02G4436 Ceratophyllum demersum
CDE05G2704 Ceratophyllum demersum
Cfa020166 Carpinus fangiana
Ciclev10012319m.g Citrus clementina
CiPaw.09G030400 Carya illinoinensis
CiPaw.10G026600 Carya illinoinensis
ClCG10G017510 Citrullus lanatus
COL.COLO4_33985 Corchorus olitorius
Cpa.g.sc85.68 Carica papaya
CsaV3_3G038850 Cucumis sativus L.
CSS0036713 Camellia sinensis var. sinensis
DCAR_013545 Daucus carota
Dinv14299 Davidia involucrata
Dinv24073 Davidia involucrata
Duzib093G0660 Durio zibethinus
Duzib106G1296 Durio zibethinus
ECA236G1848 Erigeron canadensis
EL10Ac3g06918 Beta vulgaris
Eucgr.A02451 Eucalyptus grandis
FAN02G3755 Fragaria x ananassa
FAN05G0702 Fragaria x ananassa
FAN09G2770 Fragaria x ananassa
FAN14G3363 Fragaria x ananassa
FAN14G4716 Fragaria x ananassa
FvH4_6g22380 Fragaria vesca
Glyma.02G173600 Glycine max
Glyma.09G111700 Glycine max
Gohir.A09G128000 Gossypium hirsutum
Gohir.D09G124000 Gossypium hirsutum
Gorai.006G142800 Gossypium raimondii
GSVIVG01033499001 Vitis vinifera
HanXRQChr05g0132931 Helianthus annuus
HanXRQChr06g0176171 Helianthus annuus
Haze_19987 Corylus avellana
Haze_19989 Corylus avellana
Hma1.2p1_0676F.1_g201960 Hydrangea macrophylla
HPP92_002972 Vanilla planifolia
HPP92_002995 Vanilla planifolia
HPP92_002996 Vanilla planifolia
Hund19202 Selenicereus undatus
Hund24791 Selenicereus undatus
Lalb_Chr21g0316311 Lupinus albus
Lj2A366T55 Lonicera japonica
Lj2P366T41 Lonicera japonica
Lj5g0007104 Lotus japonicus
Lsat_1_v5_gn_2_74301 Lactuca sativa
Lsat_1_v5_gn_8_115961 Lactuca sativa
Lsat_1_v5_gn_8_75341 Lactuca sativa
Manes.08G044700 Manihot esculenta
Manes.09G035300 Manihot esculenta
Mapoly0020s0060 Marchantia polymorpha
Mapoly0033s0063 Marchantia polymorpha
MBI04_g33963_MAGBIO Magnolia biondii
MD12G1057400 Malus domestica
MD14G1058000 Malus domestica
Medtr1g054070 Medicago truncatula
MELO3C009628.2 Cucumis melo
Migut.J01832 Erythranthe guttata
MSTRG.10843 Avicennia marina
Nitab4.5_0000324g0040 Nicotiana tabacum
Nitab4.5_0002488g0030 Nicotiana tabacum
Nitab4.5_0003600g0060 Nicotiana tabacum
Nitab4.5_0007056g0010 Nicotiana tabacum
Nn2g15677 Nelumbo nucifera
Oeu024481.1 Olea europaea
Oeu024482.1 Olea europaea
Oeu030335.1 Olea europaea
Oeu033737.2 Olea europaea
Oeu034264.1 Olea europaea
Oeu054954.1 Olea europaea
Os04g0665800 Oryza sativa ssp. japonica
Peaxi162Scf00258g00522 Petunia axillaris
Peaxi162Scf00480g00018 Petunia axillaris
PGR004G1518 Punica granatum
PGSC0003DMG400028004 Solanum tuberosum
PGSC0003DMG401023672 Solanum tuberosum
Phvul.007G259700 Phaseolus vulgaris
Potri.006G192200 Populus trichocarpa
Potri.016G045900 Populus trichocarpa
Pp3c10_14100 Physcomitrium patens
Prupe.7G076700 Prunus persica
Psat0s4417g0040 Pisum sativum
PSO339G4529 Papaver somniferum
PSO384G2014 Papaver somniferum
QL07p023712 Quercus lobata
RcHm_v2.0_Chr3g0479711 Rosa chinensis
Rhsim04G0096800 Rhododendron simsii
RhsimUnG0212600 Rhododendron simsii
Sabra06G0147300 Salix brachista
Sabra16G0050000 Salix brachista
SalBow1G5519 Salvia bowleyana
Sc13g0002280 Simmondsia chinensis
Sc23g0004130 Simmondsia chinensis
Sed0015879 Sechium edule
SEGI_00551 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30490 Striga asiatica
SGA_v2.0_scaffold274G46485 Striga asiatica
SMO351G0571 Selaginella moellendorffii
Solyc03g062790.3 Solanum lycopersicum
Solyc10g080490.2 Solanum lycopersicum
Sopen03g015120 Solanum pennellii
Sopen10g031040 Solanum pennellii
Sp4g24340 Schrenkiella parvula
Sp5g04710 Schrenkiella parvula
TAR623G1365 Trochodendron aralioides
TAR633G0920 Trochodendron aralioides
TAR636G3262 Trochodendron aralioides
THA.LOC104802541 Tarenaya hassleriana
THA.LOC104819884 Tarenaya hassleriana
Thecc.05G171200 Theobroma cacao
Thhalv10006122m.g Eutrema salsugineum
Thhalv10017981m.g Eutrema salsugineum
TPR.G40276 Trifolium pratense
TWI74G1538 Tripterygium wilfordii
unitig_749.g14029 Utricularia gibba
vmacro09118 Vaccinium macrocarpon
VMungo0720G2191 Vigna mungo
Zm00001eb067150 Zea mays
Zm00001eb433050 Zea mays

User provided reference genes

Program Settings