Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44900 Brassica napus
Aa31sc54G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1954 Anthoceros agrestis
Actinidia14229 Actinidia chinensis
Actinidia26357 Actinidia chinensis
AL3G45030 Arabidopsis lyrata
Aqoxy3G02754 Aquilegia oxysepala
Aqoxy4G01419 Aquilegia oxysepala
Aqoxy7G03591 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2E9WSC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.770ATG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CP8KSN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FNUG0A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K75BJP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZAJ21 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T08WW4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WC6UXQ Arachis hypogaea
AT2G12550 Arabidopsis thaliana
ATR0767G179 Amborella trichopoda
Atru.chr7.2015 Acer truncatum
AUR62011228 Chenopodium quinoa
AUR62020006 Chenopodium quinoa
BcaB08g34526 Brassica carinata
BcaC01g03128 Brassica carinata
BolC3t17859H Brassica oleracea
BraA03t13626Z Brassica rapa
C03p55780 Brassica napus
CAN.G1281.7 Capsicum annuum
CANSAT11G1945 Cannabis sativa
CARHR105080 Cardamine hirsuta
Carub.0003s2782 Capsella rubella
Ca_03095_v3 Cicer arietinum L.
Cc06_g07630 Coffea canephora
CDE05G0946 Ceratophyllum demersum
CDE05G2521 Ceratophyllum demersum
Cfa002260 Carpinus fangiana
Ciclev10007887m.g Citrus clementina
CiPaw.04G177500 Carya illinoinensis
CiPaw.04G177800 Carya illinoinensis
ClCG11G003510 Citrullus lanatus
COL.COLO4_33364 Corchorus olitorius
Cpa.g.sc46.70 Carica papaya
Cre03.g205650 Chlamydomonas reinhardtii
CsaV3_2G003380 Cucumis sativus L.
CSS0041761 Camellia sinensis var. sinensis
DCAR_014918 Daucus carota
DCAR_022901 Daucus carota
Dinv41443 Davidia involucrata
Duzib168G2148 Durio zibethinus
Duzib168G2240 Durio zibethinus
Duzib187G0975 Durio zibethinus
ECA234G1865 Erigeron canadensis
EL10Ac8g18788 Beta vulgaris
Eucgr.C04399 Eucalyptus grandis
Eucgr.C04403 Eucalyptus grandis
Eucgr.E04269 Eucalyptus grandis
Eucgr.L03187 Eucalyptus grandis
Eucgr.L03235 Eucalyptus grandis
FAN11G3069 Fragaria x ananassa
FAN16G0997 Fragaria x ananassa
FAN19G1855 Fragaria x ananassa
FAN21G2818 Fragaria x ananassa
FAN23G0971 Fragaria x ananassa
FAN25G0032 Fragaria x ananassa
FAN26G0918 Fragaria x ananassa
FAN28G2138 Fragaria x ananassa
FAN28G2979 Fragaria x ananassa
FvH4_1g01990 Fragaria vesca
FvH4_3g33700 Fragaria vesca
Glyma.09G091700 Glycine max
Glyma.15G198300 Glycine max
Glyma.17G107100 Glycine max
Gohir.A08G091100 Gossypium hirsutum
Gohir.D08G101600 Gossypium hirsutum
Gorai.004G109600 Gossypium raimondii
GSVIVG01012860001 Vitis vinifera
HanXRQChr01g0025721 Helianthus annuus
HanXRQChr04g0107841 Helianthus annuus
HanXRQChr10g0314151 Helianthus annuus
Haze_25443 Corylus avellana
HPP92_003256 Vanilla planifolia
Hund09311 Selenicereus undatus
Lalb_Chr11g0073091 Lupinus albus
Lj6g0024161 Lotus japonicus
Lj9C704T18 Lonicera japonica
Lsat_1_v5_gn_5_92700 Lactuca sativa
Manes.14G119700 Manihot esculenta
Mapoly0101s0042 Marchantia polymorpha
MBI14_g24228_MAGBIO Magnolia biondii
MD15G1162100 Malus domestica
Medtr2g450730 Medicago truncatula
MELO3C004484.2 Cucumis melo
Migut.J01235 Erythranthe guttata
MSTRG.19616 Avicennia marina
Nitab4.5_0002286g0020 Nicotiana tabacum
Nitab4.5_0002845g0050 Nicotiana tabacum
Nitab4.5_0010073g0010 Nicotiana tabacum
Nn2g12194 Nelumbo nucifera
Oeu028017.1 Olea europaea
Oeu028136.1 Olea europaea
Os04g0644300 Oryza sativa ssp. japonica
Peaxi162Scf00088g00521 Petunia axillaris
PGR102G2677 Punica granatum
PGSC0003DMG400030724 Solanum tuberosum
Phvul.009G212100 Phaseolus vulgaris
Potri.006G061500 Populus trichocarpa
Potri.018G118143 Populus trichocarpa
Pp3c3_18690 Physcomitrium patens
Prupe.7G257500 Prunus persica
Prupe.8G069200 Prunus persica
Psat1g021280 Pisum sativum
PSO210G6517 Papaver somniferum
QL02p090812 Quercus lobata
RcHm_v2.0_Chr1g0314531 Rosa chinensis
RcHm_v2.0_Chr1g0314541 Rosa chinensis
RcHm_v2.0_Chr1g0314551 Rosa chinensis
RcHm_v2.0_Chr1g0341141 Rosa chinensis
RcHm_v2.0_Chr1g0341151 Rosa chinensis
RcHm_v2.0_Chr2g0087051 Rosa chinensis
RcHm_v2.0_Chr2g0147321 Rosa chinensis
RcHm_v2.0_Chr2g0147341 Rosa chinensis
RcHm_v2.0_Chr5g0016131 Rosa chinensis
RcHm_v2.0_Chr5g0016141 Rosa chinensis
RcHm_v2.0_Chr5g0016151 Rosa chinensis
RcHm_v2.0_Chr5g0016251 Rosa chinensis
RcHm_v2.0_Chr5g0029761 Rosa chinensis
RcHm_v2.0_Chr5g0061231 Rosa chinensis
RcHm_v2.0_Chr5g0061311 Rosa chinensis
RcHm_v2.0_Chr5g0069491 Rosa chinensis
RcHm_v2.0_Chr5g0072041 Rosa chinensis
RcHm_v2.0_Chr5g0072051 Rosa chinensis
RcHm_v2.0_Chr5g0079831 Rosa chinensis
RcHm_v2.0_Chr7g0226011 Rosa chinensis
RcHm_v2.0_Chr7g0241351 Rosa chinensis
RcHm_v2.0_Chr7g0241361 Rosa chinensis
RcHm_v2.0_Chr7g0241381 Rosa chinensis
Rhsim03G0253400 Rhododendron simsii
Sabra06G0044100 Salix brachista
Sabra18G0099700 Salix brachista
Sabra18G0101500 Salix brachista
SalBow1G3789 Salvia bowleyana
Sc08g0006010 Simmondsia chinensis
Sed0012323 Sechium edule
SEGI_05144 Sequoiadendron giganteum
SMO367G0076 Selaginella moellendorffii
Solyc07g007370.3 Solanum lycopersicum
Sopen07g003440 Solanum pennellii
Sp3g26680 Schrenkiella parvula
TAR625G0398 Trochodendron aralioides
THA.LOC104808947 Tarenaya hassleriana
Thecc.08G193600 Theobroma cacao
Thecc.09G137700 Theobroma cacao
Thhalv10001944m.g Eutrema salsugineum
Thhalv10022623m.g Eutrema salsugineum
TPR.G23109 Trifolium pratense
TWI32G1222 Tripterygium wilfordii
unitig_27.g25106 Utricularia gibba
vmacro06114 Vaccinium macrocarpon
vmacro11088 Vaccinium macrocarpon
VMungo1309G2337 Vigna mungo
Zm00001eb068670 Zea mays

User provided reference genes

Program Settings