Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07600 Brassica napus
A03p32560 Brassica napus
A10p15580 Brassica napus
Actinidia10197 Actinidia chinensis
Actinidia22693 Actinidia chinensis
Ah.11g042850 Amaranthus hybridus
AL3G10800 Arabidopsis lyrata
AL8G34960 Arabidopsis lyrata
Aqoxy5G00875 Aquilegia oxysepala
Aqoxy6G02640 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5SF4Q5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7QC2VN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X8GJW4 Arachis hypogaea
AT3G01400 Arabidopsis thaliana
AT5G58680 Arabidopsis thaliana
ATR1153G116 Amborella trichopoda
Atru.chr13.826 Acer truncatum
AUR62037475 Chenopodium quinoa
AUR62038778 Chenopodium quinoa
BcaB04g21415 Brassica carinata
BcaB05g22442 Brassica carinata
BcaC01g04521 Brassica carinata
BcaC03g14081 Brassica carinata
BcaC09g47665 Brassica carinata
BNapus_Darmor_BZH_scaffold_119p00070 Brassica napus
BNapus_Darmor_BZH_scaffold_97p00360 Brassica napus
BolC1t05953H Brassica oleracea
BolC2t07437H Brassica oleracea
BolC3t16230H Brassica oleracea
BraA01t04661Z Brassica rapa
BraA02t05837Z Brassica rapa
BraA03t12425Z Brassica rapa
C02p13190 Brassica napus
C03p39640 Brassica napus
CAN.G1472.1 Capsicum annuum
CAN.G724.22 Capsicum annuum
CANSAT25G2973 Cannabis sativa
CARHR075570 Cardamine hirsuta
CARHR272590 Cardamine hirsuta
Carub.0003s0069 Capsella rubella
Carub.0008s1930 Capsella rubella
Ca_13206_v3 Cicer arietinum L.
Ca_13220_v3 Cicer arietinum L.
Ca_15905_v3 Cicer arietinum L.
Cc10_g05750 Coffea canephora
CDE02G1813 Ceratophyllum demersum
Cfa013783 Carpinus fangiana
Ciclev10001676m.g Citrus clementina
CiPaw.07G175300 Carya illinoinensis
CiPaw.08G050300 Carya illinoinensis
ClCG08G016440 Citrullus lanatus
COL.COLO4_28511 Corchorus olitorius
Cpa.g.sc1323.1 Carica papaya
CsaV3_2G026170 Cucumis sativus L.
CSS0032810 Camellia sinensis var. sinensis
DCAR_008856 Daucus carota
DCAR_009880 Daucus carota
Dinv39225 Davidia involucrata
Dinv44956 Davidia involucrata
Duzib041G0270 Durio zibethinus
Duzib093G0550 Durio zibethinus
Duzib116G0878 Durio zibethinus
ECA232G4027 Erigeron canadensis
ECA246G0704 Erigeron canadensis
EL10Ac1g02386 Beta vulgaris
Eucgr.F00081 Eucalyptus grandis
FAN15G3659 Fragaria x ananassa
FAN20G0888 Fragaria x ananassa
FAN24G3565 Fragaria x ananassa
FAN27G1376 Fragaria x ananassa
FvH4_2g33150 Fragaria vesca
Glyma.06G045900 Glycine max
Glyma.14G088900 Glycine max
Glyma.17G235600 Glycine max
Gohir.A05G209700 Gossypium hirsutum
Gohir.A06G024000 Gossypium hirsutum
Gohir.D05G213000 Gossypium hirsutum
Gohir.D06G021100 Gossypium hirsutum
Gorai.009G219600 Gossypium raimondii
Gorai.010G025700 Gossypium raimondii
GSVIVG01009347001 Vitis vinifera
HanXRQChr05g0150931 Helianthus annuus
Haze_22442 Corylus avellana
Hma1.2p1_0210F.1_g089460 Hydrangea macrophylla
Hma1.2p1_0819F.1_g223730 Hydrangea macrophylla
HPP92_024911 Vanilla planifolia
HPP92_024912 Vanilla planifolia
Hund05303 Selenicereus undatus
Lalb_Chr23g0267481 Lupinus albus
Lalb_Chr24g0399431 Lupinus albus
Lj4A758T66 Lonicera japonica
Lj4C71G1 Lonicera japonica
Lj5g0004498 Lotus japonicus
Lj5g0015765 Lotus japonicus
Lsat_1_v5_gn_4_131680 Lactuca sativa
Lsat_1_v5_gn_6_110841 Lactuca sativa
Manes.05G181700 Manihot esculenta
Manes.18G046200 Manihot esculenta
MBI16_g25188_MAGBIO Magnolia biondii
MD08G1084400 Malus domestica
MD09G1179200 Malus domestica
MD15G1070600 Malus domestica
Medtr1g018180 Medicago truncatula
Medtr3g103050 Medicago truncatula
MELO3C010809.2 Cucumis melo
Migut.N02780 Erythranthe guttata
MSTRG.24373 Avicennia marina
Nitab4.5_0000164g0040 Nicotiana tabacum
Nitab4.5_0002314g0090 Nicotiana tabacum
Nitab4.5_0003176g0020 Nicotiana tabacum
Nitab4.5_0008551g0020 Nicotiana tabacum
Nn1g04570 Nelumbo nucifera
Nn1g04678 Nelumbo nucifera
Nn1g04992 Nelumbo nucifera
Nn6g34238 Nelumbo nucifera
Oeu037491.1 Olea europaea
Oeu048579.1 Olea europaea
Peaxi162Scf00081g00189 Petunia axillaris
Peaxi162Scf00160g00417 Petunia axillaris
PGR031G3415 Punica granatum
PGR083G1484 Punica granatum
PGSC0003DMG400010616 Solanum tuberosum
PGSC0003DMG400011545 Solanum tuberosum
Phvul.001G027300 Phaseolus vulgaris
Phvul.009G071200 Phaseolus vulgaris
Potri.002G118800 Populus trichocarpa
Potri.014G016400 Populus trichocarpa
Prupe.1G423300 Prunus persica
Psat6g016080 Pisum sativum
PSO541G3943 Papaver somniferum
PSO675G2436 Papaver somniferum
QL12p038037 Quercus lobata
RcHm_v2.0_Chr6g0309511 Rosa chinensis
Rhsim06G0062200 Rhododendron simsii
Sabra02G0093300 Salix brachista
Sabra05G0134200 Salix brachista
Sabra14G0010200 Salix brachista
Sabra15G0135900 Salix brachista
SalBow2G0282 Salvia bowleyana
Sc02g0007860 Simmondsia chinensis
Sc26g0004200 Simmondsia chinensis
Sed0012154 Sechium edule
SGA_v2.0_scaffold28G11831 Striga asiatica
Solyc04g077850.3 Solanum lycopersicum
Solyc12g088360.2 Solanum lycopersicum
Sopen04g031450 Solanum pennellii
Sopen12g030340 Solanum pennellii
Sp3g00670 Schrenkiella parvula
TAR376G0077 Trochodendron aralioides
TAR628G0196 Trochodendron aralioides
THA.LOC104807068 Tarenaya hassleriana
THA.LOC104825776 Tarenaya hassleriana
Thecc.08G089300 Theobroma cacao
Thhalv10021975m.g Eutrema salsugineum
TPR.G3807 Trifolium pratense
TWI12G1356 Tripterygium wilfordii
unitig_578.g16148 Utricularia gibba
unitig_744.g24128 Utricularia gibba
VMungo0647G1589 Vigna mungo
VMungo1215G1160 Vigna mungo
VMungo1309G1223 Vigna mungo

User provided reference genes

Program Settings