Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p33230 Brassica napus
Aa31sc412G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3907 Anthoceros agrestis
Actinidia03889 Actinidia chinensis
Actinidia03999 Actinidia chinensis
Actinidia37745 Actinidia chinensis
Ah.10g034870 Amaranthus hybridus
AL5G23600 Arabidopsis lyrata
Aqoxy3G02716 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B5CH19 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HPBL6V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MW8ZKL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N29Z6M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NXCQ1Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QEP9US Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RT1NLW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TK1EDX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U8K6WM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X9KU0H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XS4KTC Arachis hypogaea
AT3G45100 Arabidopsis thaliana
ATR0315G079 Amborella trichopoda
Atru.chr3.3576 Acer truncatum
Atru.chr3.596 Acer truncatum
AUR62009232 Chenopodium quinoa
AUR62040232 Chenopodium quinoa
BcaB05g21890 Brassica carinata
BcaC03g13060 Brassica carinata
BcaC06g31990 Brassica carinata
BcaNung02130 Brassica carinata
BolC2t06047H Brassica oleracea
BolC9t60146H Brassica oleracea
BraA02t04718Z Brassica rapa
BraA10t45351Z Brassica rapa
C02p00470 Brassica napus
C02p00480 Brassica napus
C09p74140 Brassica napus
CAN.G567.62 Capsicum annuum
CANSAT11G0913 Cannabis sativa
CANSAT11G2169 Cannabis sativa
CARHR150840 Cardamine hirsuta
Carub.0004s0823 Capsella rubella
Carub.0005s1090 Capsella rubella
Ca_01392_v3 Cicer arietinum L.
Ca_25732_v3 Cicer arietinum L.
CBR_g8747 Chara braunii
Cc01_g10730 Coffea canephora
Cc01_g10740 Coffea canephora
CDE04G3212 Ceratophyllum demersum
Cfa020869 Carpinus fangiana
Cfa022887 Carpinus fangiana
Ciclev10001076m.g Citrus clementina
CiPaw.16G116700 Carya illinoinensis
ClCG03G013680 Citrullus lanatus
COL.COLO4_18287 Corchorus olitorius
Cpa.g.sc65.21 Carica papaya
Cre01.g006800 Chlamydomonas reinhardtii
CsaV3_1G042370 Cucumis sativus L.
CSS0019934 Camellia sinensis var. sinensis
DCAR_003960 Daucus carota
Dinv32698 Davidia involucrata
Duzib150G0635 Durio zibethinus
ECA248G3543 Erigeron canadensis
EL10Ac2g03980 Beta vulgaris
Eucgr.J00902 Eucalyptus grandis
FAN11G0550 Fragaria x ananassa
FAN16G0028 Fragaria x ananassa
FAN21G3501 Fragaria x ananassa
FAN23G3015 Fragaria x ananassa
FAN25G0085 Fragaria x ananassa
FvH4_3g45430 Fragaria vesca
FvH4_6g19460 Fragaria vesca
Glyma.13G182200 Glycine max
Glyma.20G052000 Glycine max
Glyma.20G052400 Glycine max
Gohir.A03G031600 Gossypium hirsutum
Gohir.D03G136700 Gossypium hirsutum
Gorai.003G143800 Gossypium raimondii
GSVIVG01024777001 Vitis vinifera
HanXRQChr01g0023931 Helianthus annuus
Haze_19298 Corylus avellana
Haze_27141 Corylus avellana
Hma1.2p1_1786F.1_g302290 Hydrangea macrophylla
Hma1.2p1_2380F.1_g320963 Hydrangea macrophylla
HPP92_024369 Vanilla planifolia
HPP92_024473 Vanilla planifolia
HPP92_027906 Vanilla planifolia
Hund03380 Selenicereus undatus
Lalb_Chr14g0374551 Lupinus albus
Lalb_Chr16g0383601 Lupinus albus
Lj1A198T34 Lonicera japonica
Lj3g0001995 Lotus japonicus
Lj4A665T31 Lonicera japonica
Lj4A675G47 Lonicera japonica
Lsat_1_v5_gn_1_77661 Lactuca sativa
Manes.04G016600 Manihot esculenta
Mapoly0056s0054 Marchantia polymorpha
MBI01_g34901_MAGBIO Magnolia biondii
MCO11G325 Micromonas commoda
MD03G1005100 Malus domestica
MD03G1005200 Malus domestica
MD11G1006700 Malus domestica
MD11G1007700 Malus domestica
Medtr2g047140 Medicago truncatula
Medtr2g095220 Medicago truncatula
Medtr4g089065 Medicago truncatula
MELO3C015670.2 Cucumis melo
Migut.J01586 Erythranthe guttata
MSTRG.17732 Avicennia marina
MSTRG.19754 Avicennia marina
Nitab4.5_0002151g0070 Nicotiana tabacum
Nitab4.5_0004436g0010 Nicotiana tabacum
Nn1g07453 Nelumbo nucifera
Oeu022026.1 Olea europaea
Os07g0270950 Oryza sativa ssp. japonica
Peaxi162Scf00073g01829 Petunia axillaris
Peaxi162Scf00503g00426 Petunia axillaris
PGSC0003DMG400012127 Solanum tuberosum
Phvul.002G226400 Phaseolus vulgaris
Phvul.005G132400 Phaseolus vulgaris
Potri.016G130000 Populus trichocarpa
Pp3c16_10880 Physcomitrium patens
PRCOL_00000052 Prasinoderma coloniale
Prupe.6G004900 Prunus persica
Prupe.6G143200 Prunus persica
Psat3g055640 Pisum sativum
Psat5g279520 Pisum sativum
Psat6g225840 Pisum sativum
Psat7g055560 Pisum sativum
Psat7g112240 Pisum sativum
PSO675G8453 Papaver somniferum
QL02p091623 Quercus lobata
QL02p091680 Quercus lobata
RcHm_v2.0_Chr5g0083231 Rosa chinensis
Rhsim03G0064700 Rhododendron simsii
Sabra16G0128800 Salix brachista
Sc04g0002220 Simmondsia chinensis
Sed0018938 Sechium edule
SEGI_00213 Sequoiadendron giganteum
SEGI_40785 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22336 Striga asiatica
SHI20353 Sapria himalayana
SMO353G0094 Selaginella moellendorffii
Solyc08g082840.3 Solanum lycopersicum
Sopen08g031070 Solanum pennellii
Sp6g40060 Schrenkiella parvula
TAR624G1319 Trochodendron aralioides
TAR626G0869 Trochodendron aralioides
THA.LOC104799510 Tarenaya hassleriana
Thecc.09G346400 Theobroma cacao
Thhalv10002532m.g Eutrema salsugineum
TPR.G11585 Trifolium pratense
TPR.G11973 Trifolium pratense
TWI79G0138 Tripterygium wilfordii
unitig_899.g14459 Utricularia gibba
vmacro21498 Vaccinium macrocarpon
VMungo0251G0290 Vigna mungo
VMungo0251G0332 Vigna mungo
VMungo1080G0188 Vigna mungo
Zm00001eb097230 Zea mays
Zm00001eb322240 Zea mays

User provided reference genes

Program Settings