Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12700 Brassica napus
A08p31300 Brassica napus
Aa31LG7G1200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5758 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.929 Anthoceros agrestis
Actinidia13485 Actinidia chinensis
Ah.06g192000 Amaranthus hybridus
AL1G28910 Arabidopsis lyrata
Aqoxy3G00192 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PTU9AS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VAHF8H Arachis hypogaea
AT1G16740 Arabidopsis thaliana
ATR0618G343 Amborella trichopoda
Atru.chr8.947 Acer truncatum
AUR62000936 Chenopodium quinoa
AUR62005032 Chenopodium quinoa
BcaB02g06679 Brassica carinata
BcaB03g13034 Brassica carinata
BcaC07g38811 Brassica carinata
BolC5t30215H Brassica oleracea
BolC8t49379H Brassica oleracea
BraA06t24430Z Brassica rapa
BraA08t35053Z Brassica rapa
C05p15000 Brassica napus
C08p17530 Brassica napus
CAN.G79.42 Capsicum annuum
CANSAT35G0656 Cannabis sativa
CANSAT56G2838 Cannabis sativa
CARHR017200 Cardamine hirsuta
Carub.0001s1648 Capsella rubella
Ca_06131_v3 Cicer arietinum L.
CBR_g49054 Chara braunii
Cc09_g08010 Coffea canephora
CDE04G1757 Ceratophyllum demersum
CDE08G1311 Ceratophyllum demersum
Ciclev10029584m.g Citrus clementina
CiPaw.01G092700 Carya illinoinensis
ClCG02G018700 Citrullus lanatus
COL.COLO4_26811 Corchorus olitorius
Cpa.g.sc4.119 Carica papaya
Cre01.g052350 Chlamydomonas reinhardtii
CsaV3_6G013470 Cucumis sativus L.
CSS0000388 Camellia sinensis var. sinensis
DCAR_003856 Daucus carota
Dinv05126 Davidia involucrata
Duzib235G0097 Durio zibethinus
ECA246G0212 Erigeron canadensis
EL10Ac1g00574 Beta vulgaris
EL10Ac4g08123 Beta vulgaris
EL10Ac4g09241 Beta vulgaris
EL10Ac8g19560 Beta vulgaris
EL10Ac8g19692 Beta vulgaris
EL10Ac8g19693 Beta vulgaris
EL10Ac9g22335 Beta vulgaris
Eucgr.B03760 Eucalyptus grandis
FAN11G1980 Fragaria x ananassa
FAN16G3308 Fragaria x ananassa
FAN21G1444 Fragaria x ananassa
FAN25G2185 Fragaria x ananassa
FvH4_3g14110 Fragaria vesca
Glyma.02G272000 Glycine max
Gohir.A11G319600 Gossypium hirsutum
Gohir.D11G338800 Gossypium hirsutum
Gorai.007G368500 Gossypium raimondii
GSVIVG01015827001 Vitis vinifera
HanXRQChr03g0087831 Helianthus annuus
HanXRQChr17g0543051 Helianthus annuus
Haze_16244 Corylus avellana
Hma1.2p1_0333F.1_g128240 Hydrangea macrophylla
HPP92_025894 Vanilla planifolia
Hund17691 Selenicereus undatus
Lalb_Chr04g0249811 Lupinus albus
Lalb_Chr10g0105771 Lupinus albus
LjContig00564g0013918 Lotus japonicus
Lsat_1_v5_gn_1_42081 Lactuca sativa
Lsat_1_v5_gn_4_69821 Lactuca sativa
Manes.03G095700 Manihot esculenta
Mapoly0002s0127 Marchantia polymorpha
MBI03_g42617_MAGBIO Magnolia biondii
MCO12G023 Micromonas commoda
MD07G1169200 Malus domestica
MD10G1216300 Malus domestica
Medtr0027s0250 Medicago truncatula
Medtr5g087380 Medicago truncatula
MELO3C019631.2 Cucumis melo
Migut.M01892 Erythranthe guttata
Migut.M01926 Erythranthe guttata
MSTRG.14797 Avicennia marina
Nitab4.5_0001225g0030 Nicotiana tabacum
Nitab4.5_0004615g0060 Nicotiana tabacum
Nitab4.5_0008405g0010 Nicotiana tabacum
Nn1g08913 Nelumbo nucifera
Nn7g36646 Nelumbo nucifera
Oeu015180.1 Olea europaea
Oeu041103.1 Olea europaea
Os01g0734100 Oryza sativa ssp. japonica
Os05g0528200 Oryza sativa ssp. japonica
Peaxi162Scf00267g00035 Petunia axillaris
PGR073G0001 Punica granatum
PGR073G0004 Punica granatum
PGR073G0005 Punica granatum
PGR073G0006 Punica granatum
PGR087G0002 Punica granatum
PGR087G0004 Punica granatum
PGR142G0123 Punica granatum
PGR142G0549 Punica granatum
PGR142G0707 Punica granatum
PGR142G0749 Punica granatum
PGR142G1158 Punica granatum
PGR142G2293 Punica granatum
PGR142G2466 Punica granatum
PGR142G2495 Punica granatum
PGR142G2513 Punica granatum
PGR142G2683 Punica granatum
PGR142G3851 Punica granatum
PGSC0003DMG400021190 Solanum tuberosum
Phvul.009G196700 Phaseolus vulgaris
Potri.004G095475 Populus trichocarpa
Potri.017G119300 Populus trichocarpa
Pp3c20_1830 Physcomitrium patens
PRCOL_00003603 Prasinoderma coloniale
Prupe.1G563700 Prunus persica
Prupe.4G128400 Prunus persica
Psat2g023600 Pisum sativum
PSO339G5129 Papaver somniferum
PSO384G3508 Papaver somniferum
QL06p000079 Quercus lobata
QL06p000082 Quercus lobata
RcHm_v2.0_Chr5g0023421 Rosa chinensis
Rhsim05G0148000 Rhododendron simsii
Sabra17G0098500 Salix brachista
SalBow7G3040 Salvia bowleyana
Sc17g0004630 Simmondsia chinensis
Sed0010742 Sechium edule
Sed0012483 Sechium edule
SGA_v2.0_scaffold223G42863 Striga asiatica
SHI24418 Sapria himalayana
SHI24419 Sapria himalayana
SMO198G0083 Selaginella moellendorffii
SMO244G0037 Selaginella moellendorffii
SMO281G0018 Selaginella moellendorffii
SMO358G0062 Selaginella moellendorffii
Solyc02g069840.3 Solanum lycopersicum
Solyc09g055460.3 Solanum lycopersicum
Sopen02g019000 Solanum pennellii
Sp1g14890 Schrenkiella parvula
TAR374G0177 Trochodendron aralioides
TAR622G1262 Trochodendron aralioides
THA.LOC104812342 Tarenaya hassleriana
Thecc.06G049600 Theobroma cacao
Thhalv10009114m.g Eutrema salsugineum
TPR.G29918 Trifolium pratense
TWI60G0757 Tripterygium wilfordii
TWI81G0537 Tripterygium wilfordii
unitig_37.g12076 Utricularia gibba
unitig_92.g28171 Utricularia gibba
vmacro03391 Vaccinium macrocarpon
vmacro03444 Vaccinium macrocarpon
VMungo1309G1322 Vigna mungo
Zm00001eb154030 Zea mays
Zm00001eb353650 Zea mays

User provided reference genes

Program Settings