Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p24620 Brassica napus
A05p13560 Brassica napus
Aa31LG5G5030 Aethionema arabicum
Actinidia20846 Actinidia chinensis
Ah.04g149600 Amaranthus hybridus
AL4G27330 Arabidopsis lyrata
AL80U10090 Arabidopsis lyrata
Aqoxy6G02150 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3CP281 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N3F7NN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PWIR9U Arachis hypogaea
AT2G31980 Arabidopsis thaliana
ATR1147G012 Amborella trichopoda
ATR1147G019 Amborella trichopoda
Atru.chr2.1390 Acer truncatum
Atru.chr3.1769 Acer truncatum
AUR62018538 Chenopodium quinoa
AUR62020879 Chenopodium quinoa
BcaB01g04003 Brassica carinata
BcaB02g10433 Brassica carinata
BcaC01g05924 Brassica carinata
BcaC02g07957 Brassica carinata
BolC4t23313H Brassica oleracea
BolC4t27635H Brassica oleracea
BraA04t17981Z Brassica rapa
BraA05t20293Z Brassica rapa
C04p61510 Brassica napus
CAN.G2073.1 Capsicum annuum
CAN.G767.26 Capsicum annuum
CANSAT78G0162 Cannabis sativa
CARHR125730 Cardamine hirsuta
Carub.0004s1330 Capsella rubella
Ca_16434_v3 Cicer arietinum L.
Ca_18010_v3 Cicer arietinum L.
CDE09G0913 Ceratophyllum demersum
Cfa008670 Carpinus fangiana
Ciclev10006584m.g Citrus clementina
CiPaw.01G112400 Carya illinoinensis
CiPaw.02G062200 Carya illinoinensis
ClCG08G003930 Citrullus lanatus
COL.COLO4_35967 Corchorus olitorius
Cpa.g.sc157.8 Carica papaya
CsaV3_6G003120 Cucumis sativus L.
DCAR_011872 Daucus carota
Duzib151G1126 Durio zibethinus
Duzib212G0061 Durio zibethinus
Duzib212G0695 Durio zibethinus
Duzib268G1831 Durio zibethinus
ECA233G0812 Erigeron canadensis
ECA248G2326 Erigeron canadensis
EL10Ac3g07440 Beta vulgaris
Eucgr.L00642 Eucalyptus grandis
FAN07G1022 Fragaria x ananassa
FAN12G1054 Fragaria x ananassa
FAN22G2328 Fragaria x ananassa
FvH4_4g12780 Fragaria vesca
Glyma.05G149800 Glycine max
Glyma.11G253300 Glycine max
Glyma.18G003700 Glycine max
Gohir.A02G016600 Gossypium hirsutum
Gohir.A03G095800 Gossypium hirsutum
Gohir.A09G208200 Gossypium hirsutum
Gohir.A09G208300 Gossypium hirsutum
Gohir.A09G208375 Gossypium hirsutum
Gohir.D02G018300 Gossypium hirsutum
Gohir.D02G113100 Gossypium hirsutum
Gohir.D09G201700 Gossypium hirsutum
Gohir.D09G201800 Gossypium hirsutum
Gorai.005G022500 Gossypium raimondii
Gorai.005G128000 Gossypium raimondii
Gorai.006G225500 Gossypium raimondii
Gorai.006G225600 Gossypium raimondii
GSVIVG01021035001 Vitis vinifera
HanXRQChr02g0058381 Helianthus annuus
HanXRQChr11g0344521 Helianthus annuus
HanXRQChr11g0344531 Helianthus annuus
Haze_11689 Corylus avellana
Hma1.2p1_0984F.1_g244250 Hydrangea macrophylla
HPP92_006959 Vanilla planifolia
HPP92_013629 Vanilla planifolia
HPP92_013636 Vanilla planifolia
Lalb_Chr12g0205921 Lupinus albus
Lj4g0016440 Lotus japonicus
Lsat_1_v5_gn_1_69140 Lactuca sativa
Lsat_1_v5_gn_6_58740 Lactuca sativa
Manes.05G198300 Manihot esculenta
Manes.05G198500 Manihot esculenta
MD04G1023200 Malus domestica
Medtr3g084780 Medicago truncatula
Medtr8g080920 Medicago truncatula
MELO3C027001.2 Cucumis melo
Migut.G00820 Erythranthe guttata
Migut.G01151 Erythranthe guttata
Nitab4.5_0000136g0420 Nicotiana tabacum
Nn1g08115 Nelumbo nucifera
Nn1g08258 Nelumbo nucifera
Nn3g20121 Nelumbo nucifera
Nn3g20123 Nelumbo nucifera
Oeu022676.1 Olea europaea
Oeu056457.1 Olea europaea
Os01g0915200 Oryza sativa ssp. japonica
Os01g0915401 Oryza sativa ssp. japonica
Os04g0350100 Oryza sativa ssp. japonica
Peaxi162Scf00286g00082 Petunia axillaris
PGR142G1429 Punica granatum
PGSC0003DMG400017928 Solanum tuberosum
Phvul.001G264400 Phaseolus vulgaris
Phvul.003G065700 Phaseolus vulgaris
Phvul.003G066000 Phaseolus vulgaris
Phvul.003G066200 Phaseolus vulgaris
Phvul.003G066500 Phaseolus vulgaris
Phvul.003G066600 Phaseolus vulgaris
Potri.002G235800 Populus trichocarpa
Potri.014G149300 Populus trichocarpa
Prupe.1G014700 Prunus persica
Prupe.1G172900 Prunus persica
Prupe.3G089900 Prunus persica
Psat5g097200 Pisum sativum
Psat7g076120 Pisum sativum
PSO017G1287 Papaver somniferum
PSO017G2962 Papaver somniferum
PSO017G3265 Papaver somniferum
PSO017G4907 Papaver somniferum
PSO017G5773 Papaver somniferum
PSO063G3308 Papaver somniferum
PSO135G0242 Papaver somniferum
PSO675G4685 Papaver somniferum
PSO675G4781 Papaver somniferum
PSO675G6640 Papaver somniferum
PSO675G9247 Papaver somniferum
QL06p027589 Quercus lobata
RcHm_v2.0_Chr4g0402871 Rosa chinensis
RcHm_v2.0_Chr4g0412111 Rosa chinensis
Rhsim10G0187200 Rhododendron simsii
Sabra02G0179600 Salix brachista
SalBow2G2613 Salvia bowleyana
SalBow4G2682 Salvia bowleyana
Sc19g0007440 Simmondsia chinensis
Sc25g0005730 Simmondsia chinensis
SGA_v2.0_scaffold17G08023 Striga asiatica
Solyc09g097850.1 Solanum lycopersicum
Solyc12g098607.1 Solanum lycopersicum
Sopen09g035790 Solanum pennellii
Sopen12g033370 Solanum pennellii
Sp4g14360 Schrenkiella parvula
TAR362G0523 Trochodendron aralioides
TAR365G1206 Trochodendron aralioides
THA.LOC104800949 Tarenaya hassleriana
THA.LOC104800950 Tarenaya hassleriana
THA.LOC104815881 Tarenaya hassleriana
THA.LOC104826169 Tarenaya hassleriana
Thecc.04G190600 Theobroma cacao
Thhalv10017392m.g Eutrema salsugineum
TPR.G11834 Trifolium pratense
TWI09G0077 Tripterygium wilfordii
TWI73G0762 Tripterygium wilfordii
unitig_747.g21663 Utricularia gibba
vmacro20438 Vaccinium macrocarpon
VMungo0251G1529 Vigna mungo
VMungo1383G1064 Vigna mungo
Zm00001eb364860 Zea mays

User provided reference genes

Program Settings