Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p05320 Brassica napus
A09p10690 Brassica napus
Aa31LG8G13140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1281 Anthoceros agrestis
Actinidia00412 Actinidia chinensis
Actinidia05493 Actinidia chinensis
Actinidia17478 Actinidia chinensis
Ah.01g018220 Amaranthus hybridus
AL3G47010 Arabidopsis lyrata
Aqoxy5G01146 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BMM90D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5NBXN Arachis hypogaea
AT2G15290 Arabidopsis thaliana
ATR0691G207 Amborella trichopoda
Atru.chr5.2587 Acer truncatum
AUR62010302 Chenopodium quinoa
AUR62039084 Chenopodium quinoa
BcaB03g16278 Brassica carinata
BcaB07g31794 Brassica carinata
BcaB08g34587 Brassica carinata
BcaC06g31580 Brassica carinata
BcaC06g36051 Brassica carinata
BolC7t41261H Brassica oleracea
BolC9t54158H Brassica oleracea
BraA07t28325Z Brassica rapa
BraA09t36712Z Brassica rapa
C07p08470 Brassica napus
C09p12690 Brassica napus
CAN.G1231.10 Capsicum annuum
CAN.G3385.1 Capsicum annuum
CANSAT25G0591 Cannabis sativa
CANSAT25G2876 Cannabis sativa
CARHR105660 Cardamine hirsuta
Carub.0003s2912 Capsella rubella
Ca_11078_v3 Cicer arietinum L.
CBR_g28861 Chara braunii
CBR_g28866 Chara braunii
CBR_g39267 Chara braunii
Cc02_g19230 Coffea canephora
CDE04G0259 Ceratophyllum demersum
CDE06G1648 Ceratophyllum demersum
Cfa004574 Carpinus fangiana
Ciclev10029016m.g Citrus clementina
CiPaw.05G011200 Carya illinoinensis
CiPaw.06G169600 Carya illinoinensis
ClCG02G006310 Citrullus lanatus
COL.COLO4_32599 Corchorus olitorius
Cpa.g.sc106.89 Carica papaya
CsaV3_7G008120 Cucumis sativus L.
CSS0017890 Camellia sinensis var. sinensis
CSS0019678 Camellia sinensis var. sinensis
CSS0044080 Camellia sinensis var. sinensis
DCAR_001641 Daucus carota
DCAR_021989 Daucus carota
Dinv15761 Davidia involucrata
Duzib132G0413 Durio zibethinus
Duzib248G1610 Durio zibethinus
ECA234G3549 Erigeron canadensis
ECA240G4367 Erigeron canadensis
EL10Ac9g22281 Beta vulgaris
Eucgr.E02954 Eucalyptus grandis
FAN15G2242 Fragaria x ananassa
FAN20G1574 Fragaria x ananassa
FAN24G2858 Fragaria x ananassa
FAN27G3473 Fragaria x ananassa
FvH4_2g05240 Fragaria vesca
Glyma.10G261800 Glycine max
Glyma.20G129100 Glycine max
Gohir.A03G186500 Gossypium hirsutum
Gohir.A13G043700 Gossypium hirsutum
Gohir.D02G207300 Gossypium hirsutum
Gohir.D13G042200 Gossypium hirsutum
Gorai.005G235200 Gossypium raimondii
Gorai.013G047100 Gossypium raimondii
GSVIVG01003161001 Vitis vinifera
HanXRQChr01g0018911 Helianthus annuus
HanXRQChr10g0292341 Helianthus annuus
HanXRQChr16g0514851 Helianthus annuus
HanXRQChr17g0567381 Helianthus annuus
Haze_10166 Corylus avellana
Hma1.2p1_0796F.1_g219180 Hydrangea macrophylla
HPP92_004770 Vanilla planifolia
HPP92_008279 Vanilla planifolia
Hund00148 Selenicereus undatus
Hund06320 Selenicereus undatus
Lalb_Chr02g0145321 Lupinus albus
Lalb_Chr06g0165471 Lupinus albus
Lj5g0008999 Lotus japonicus
Lj9C321G12 Lonicera japonica
Lsat_1_v5_gn_5_114881 Lactuca sativa
Manes.07G069100 Manihot esculenta
Manes.10G076300 Manihot esculenta
Mapoly0049s0087 Marchantia polymorpha
MCO10G127 Micromonas commoda
MD05G1088600 Malus domestica
MD10G1096700 Malus domestica
Medtr1g107450 Medicago truncatula
MELO3C018494.2 Cucumis melo
Migut.B00385 Erythranthe guttata
MSTRG.16716 Avicennia marina
MSTRG.20184 Avicennia marina
Nitab4.5_0002815g0090 Nicotiana tabacum
Nitab4.5_0005392g0030 Nicotiana tabacum
Nn1g04705 Nelumbo nucifera
Nn5g30419 Nelumbo nucifera
Oeu010397.1 Olea europaea
Oeu018597.1 Olea europaea
Os02g0187600 Oryza sativa ssp. japonica
Os06g0638100 Oryza sativa ssp. japonica
Peaxi162Scf00016g02324 Petunia axillaris
PGR142G3187 Punica granatum
PGSC0003DMG400025865 Solanum tuberosum
Phvul.007G040300 Phaseolus vulgaris
Potri.001G300500 Populus trichocarpa
Potri.009G096300 Populus trichocarpa
Pp3c10_9500 Physcomitrium patens
Pp3c1_21740 Physcomitrium patens
Pp3c27_4260 Physcomitrium patens
PRCOL_00004645 Prasinoderma coloniale
Prupe.8G134600 Prunus persica
Psat6g219200 Pisum sativum
PSO170G0588 Papaver somniferum
PSO210G2671 Papaver somniferum
QL11p033916 Quercus lobata
RcHm_v2.0_Chr6g0255371 Rosa chinensis
Rhsim05G0088400 Rhododendron simsii
Rhsim11G0160300 Rhododendron simsii
Sabra09G0074000 Salix brachista
Sabra16G0188700 Salix brachista
SalBow6G6827 Salvia bowleyana
Sc17g0003020 Simmondsia chinensis
Sed0001090 Sechium edule
Sed0013348 Sechium edule
SEGI_03021 Sequoiadendron giganteum
SEGI_11302 Sequoiadendron giganteum
SGA_v2.0_scaffold225G43078 Striga asiatica
SGA_v2.0_scaffold32G13039 Striga asiatica
SHI05289 Sapria himalayana
SMO118G0560 Selaginella moellendorffii
Solyc01g107640.3 Solanum lycopersicum
Sopen01g049830 Solanum pennellii
Sp3g28570 Schrenkiella parvula
TAR381G0562 Trochodendron aralioides
TAR381G0937 Trochodendron aralioides
TAR628G0195 Trochodendron aralioides
THA.LOC104807244 Tarenaya hassleriana
THA.LOC104819557 Tarenaya hassleriana
Thecc.02G107400 Theobroma cacao
Thhalv10022775m.g Eutrema salsugineum
TWI31G0226 Tripterygium wilfordii
TWI79G0876 Tripterygium wilfordii
unitig_22.g5194 Utricularia gibba
unitig_8.g3679 Utricularia gibba
vmacro02006 Vaccinium macrocarpon
vmacro19448 Vaccinium macrocarpon
vmacro19524 Vaccinium macrocarpon
VMungo0251G3374 Vigna mungo
VMungo0720G2723 Vigna mungo
Zm00001eb206410 Zea mays
Zm00001eb234680 Zea mays
Zm00001eb387350 Zea mays

User provided reference genes

Program Settings