Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20000 Brassica napus
A05p09610 Brassica napus
Aa31LG5G21350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.169 Anthoceros agrestis
Actinidia05427 Actinidia chinensis
AL4G32330 Arabidopsis lyrata
Aqoxy1G00845 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1FC84E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H91IF8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IMVN0M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L677I4 Arachis hypogaea
AT2G36230 Arabidopsis thaliana
ATR1125G096 Amborella trichopoda
Atru.chr12.1330 Acer truncatum
Atru.chr8.1532 Acer truncatum
AUR62036483 Chenopodium quinoa
AUR62037092 Chenopodium quinoa
BcaB01g03853 Brassica carinata
BcaB02g09373 Brassica carinata
BcaB02g09374 Brassica carinata
BcaC02g11725 Brassica carinata
BcaC02g11727 Brassica carinata
BcaC02g11729 Brassica carinata
BcaC02g11730 Brassica carinata
BolC3t14740H Brassica oleracea
BolC4t22839H Brassica oleracea
BraA03t11251Z Brassica rapa
BraA05t19914Z Brassica rapa
C03p23440 Brassica napus
C04p11920 Brassica napus
CAN.G694.90 Capsicum annuum
CANSAT64G1281 Cannabis sativa
CARHR130470 Cardamine hirsuta
Carub.0004s1799 Capsella rubella
Ca_00406_v3 Cicer arietinum L.
CBR_g21822 Chara braunii
Cc06_g05800 Coffea canephora
Cc11_g01850 Coffea canephora
CDE04G2184 Ceratophyllum demersum
CDE04G3206 Ceratophyllum demersum
CDE07G1047 Ceratophyllum demersum
Cfa016611 Carpinus fangiana
Cfa023382 Carpinus fangiana
Ciclev10012240m.g Citrus clementina
CiPaw.09G014500 Carya illinoinensis
CiPaw.10G010000 Carya illinoinensis
ClCG08G000960 Citrullus lanatus
ClCG08G005200 Citrullus lanatus
COL.COLO4_29729 Corchorus olitorius
COL.COLO4_29730 Corchorus olitorius
Cpa.g.sc999.2 Carica papaya
Cre12.g495300 Chlamydomonas reinhardtii
CsaV3_5G040040 Cucumis sativus L.
CSS0045328 Camellia sinensis var. sinensis
DCAR_006449 Daucus carota
Dinv21204 Davidia involucrata
Duzib093G2067 Durio zibethinus
ECA233G4866 Erigeron canadensis
ECA248G0038 Erigeron canadensis
EL10Ac8g19596 Beta vulgaris
Eucgr.A02663 Eucalyptus grandis
FAN02G4498 Fragaria x ananassa
FAN05G3501 Fragaria x ananassa
FAN05G3651 Fragaria x ananassa
FAN14G0980 Fragaria x ananassa
FvH4_6g18781 Fragaria vesca
FvH4_6g18790 Fragaria vesca
Glyma.02G054800 Glycine max
Glyma.13G153700 Glycine max
Glyma.16G134951 Glycine max
Gohir.A04G062600 Gossypium hirsutum
Gohir.D04G099600 Gossypium hirsutum
Gorai.009G402500 Gossypium raimondii
GSVIVG01033847001 Vitis vinifera
HanXRQChr03g0063591 Helianthus annuus
Haze_19615 Corylus avellana
Hma1.2p1_0084F.1_g043840 Hydrangea macrophylla
Hma1.2p1_0820F.1_g223850 Hydrangea macrophylla
HPP92_001188 Vanilla planifolia
Lalb_Chr06g0172241 Lupinus albus
Lalb_Chr06g0172361 Lupinus albus
Lalb_Chr06g0172371 Lupinus albus
Lalb_Chr06g0172381 Lupinus albus
Lj1g0018712 Lotus japonicus
Lj2A137G26 Lonicera japonica
Lsat_1_v5_gn_8_77140 Lactuca sativa
Manes.08G025500 Manihot esculenta
Mapoly0011s0027 Marchantia polymorpha
Mapoly0100s0062 Marchantia polymorpha
MBI17_g08343_MAGBIO Magnolia biondii
MCO11G008 Micromonas commoda
MD12G1036500 Malus domestica
MD14G1023300 Malus domestica
Medtr2g015010 Medicago truncatula
MELO3C022184.2 Cucumis melo
Migut.J01033 Erythranthe guttata
MSTRG.19262 Avicennia marina
Nitab4.5_0000071g0140 Nicotiana tabacum
Nitab4.5_0000582g0210 Nicotiana tabacum
Nitab4.5_0004212g0050 Nicotiana tabacum
Nitab4.5_0006507g0050 Nicotiana tabacum
Nn6g34893 Nelumbo nucifera
Oeu056880.1 Olea europaea
Os05g0400800 Oryza sativa ssp. japonica
Peaxi162Scf00858g00311 Petunia axillaris
PGR042G0526 Punica granatum
PGSC0003DMG400023338 Solanum tuberosum
Phvul.009G260700 Phaseolus vulgaris
Potri.004G090500 Populus trichocarpa
Potri.017G124800 Populus trichocarpa
Pp3c12_22840 Physcomitrium patens
PRCOL_00002294 Prasinoderma coloniale
Prupe.7G109700 Prunus persica
Psat1g201080 Pisum sativum
PSO339G4690 Papaver somniferum
PSO384G3644 Papaver somniferum
QL07p038716 Quercus lobata
QL07p038966 Quercus lobata
RcHm_v2.0_Chr1g0350151 Rosa chinensis
RcHm_v2.0_Chr3g0473801 Rosa chinensis
RcHm_v2.0_Chr4g0393091 Rosa chinensis
RcHm_v2.0_Chr4g0409701 Rosa chinensis
RcHm_v2.0_Chr5g0027171 Rosa chinensis
Rhsim07G0247200 Rhododendron simsii
Rhsim07G0247300 Rhododendron simsii
Rhsim07G0247400 Rhododendron simsii
Rhsim09G0019500 Rhododendron simsii
Rhsim09G0019600 Rhododendron simsii
RhsimUnG0066300 Rhododendron simsii
RhsimUnG0066500 Rhododendron simsii
Sabra04G0060800 Salix brachista
SalBow3G1569 Salvia bowleyana
SalBow4G0277 Salvia bowleyana
Sc02g0000280 Simmondsia chinensis
Sed0019477 Sechium edule
SEGI_21930 Sequoiadendron giganteum
SEGI_22783 Sequoiadendron giganteum
SEGI_28293 Sequoiadendron giganteum
SEGI_40272 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24747 Striga asiatica
SHI27835 Sapria himalayana
SMO164G0227 Selaginella moellendorffii
SMO271G0065 Selaginella moellendorffii
SMO308G0039 Selaginella moellendorffii
Solyc05g056150.4 Solanum lycopersicum
Sopen05g034560 Solanum pennellii
Sp4g18450 Schrenkiella parvula
TAR623G0834 Trochodendron aralioides
THA.LOC104804908 Tarenaya hassleriana
Thecc.05G089600 Theobroma cacao
Thhalv10016966m.g Eutrema salsugineum
TPR.G11735 Trifolium pratense
TWI74G1045 Tripterygium wilfordii
unitig_8.g4306 Utricularia gibba
vmacro04351 Vaccinium macrocarpon
vmacro04352 Vaccinium macrocarpon
vmacro21413 Vaccinium macrocarpon
VMungo0647G1368 Vigna mungo
VMungo1309G2207 Vigna mungo
Zm00001eb020250 Zea mays
Zm00001eb287580 Zea mays

User provided reference genes

Program Settings