Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p40960 Brassica napus
A06p34440 Brassica napus
Aa31LG11G2870 Aethionema arabicum
Actinidia33639 Actinidia chinensis
Ah.04g157380 Amaranthus hybridus
AL6G34740 Arabidopsis lyrata
Aqoxy5G04401 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8PY7V8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U9T50E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VXL9CA Arachis hypogaea
AT5G23450 Arabidopsis thaliana
ATR0810G148 Amborella trichopoda
Atru.chr11.7 Acer truncatum
AUR62005937 Chenopodium quinoa
AUR62028126 Chenopodium quinoa
BcaNung03734 Brassica carinata
BcaNung03855 Brassica carinata
BolC2t12137H Brassica oleracea
BolC7t44936H Brassica oleracea
BraA02t09044Z Brassica rapa
BraA06t26373Z Brassica rapa
C02p60850 Brassica napus
C07p44100 Brassica napus
CAN.G1045.17 Capsicum annuum
CANSAT78G1818 Cannabis sativa
CARHR190060 Cardamine hirsuta
Carub.0006s2125 Capsella rubella
Ca_04130_v3 Cicer arietinum L.
CBR_g39941 Chara braunii
CBR_g39942 Chara braunii
Cc02_g29660 Coffea canephora
CDE09G0893 Ceratophyllum demersum
CDE11G0399 Ceratophyllum demersum
CDE11G1250 Ceratophyllum demersum
Cfa018662 Carpinus fangiana
Ciclev10014323m.g Citrus clementina
CiPaw.16G000300 Carya illinoinensis
ClCG11G012850 Citrullus lanatus
Cpa.g.sc248.6 Carica papaya
CsaV3_5G029250 Cucumis sativus L.
CSS0046171 Camellia sinensis var. sinensis
DCAR_009036 Daucus carota
DCAR_020440 Daucus carota
Dinv12635 Davidia involucrata
Duzib052G0576 Durio zibethinus
Duzib132G0849 Durio zibethinus
Duzib248G0301 Durio zibethinus
ECA248G3474 Erigeron canadensis
EL10Ac3g05121 Beta vulgaris
Eucgr.J00322 Eucalyptus grandis
FAN07G0162 Fragaria x ananassa
FAN07G0307 Fragaria x ananassa
FAN17G2490 Fragaria x ananassa
FvH4_4g37380 Fragaria vesca
Glyma.05G000200 Glycine max
Glyma.19G000300 Glycine max
Gohir.A04G110200 Gossypium hirsutum
Gohir.A12G011300 Gossypium hirsutum
Gohir.D04G150400 Gossypium hirsutum
Gohir.D12G011700 Gossypium hirsutum
Gohir.D12G011780 Gossypium hirsutum
Gohir.D13G058925 Gossypium hirsutum
Gorai.008G011700 Gossypium raimondii
Gorai.012G137000 Gossypium raimondii
Gorai.013G066500 Gossypium raimondii
GSVIVG01002027001 Vitis vinifera
GSVIVG01002796001 Vitis vinifera
GSVIVG01003920001 Vitis vinifera
GSVIVG01038287001 Vitis vinifera
HanXRQChr01g0023401 Helianthus annuus
HanXRQChr11g0343011 Helianthus annuus
Haze_00003 Corylus avellana
Haze_17392 Corylus avellana
Hma1.2p1_0185F.1_g081480 Hydrangea macrophylla
Hma1.2p1_0548F.1_g176670 Hydrangea macrophylla
HPP92_008907 Vanilla planifolia
HPP92_008908 Vanilla planifolia
HPP92_022588 Vanilla planifolia
HPP92_022710 Vanilla planifolia
HPP92_028194 Vanilla planifolia
Hund09760 Selenicereus undatus
Hund21081 Selenicereus undatus
Lj2g0009416 Lotus japonicus
Lju50C3G3 Lonicera japonica
Lsat_1_v5_gn_1_74220 Lactuca sativa
Manes.11G000400 Manihot esculenta
Mapoly0012s0022 Marchantia polymorpha
MBI04_g37105_MAGBIO Magnolia biondii
MBI12_g01745_MAGBIO Magnolia biondii
MD13G1000100 Malus domestica
MD16G1005700 Malus domestica
MD16G1005800 Malus domestica
Medtr6g004070 Medicago truncatula
MELO3C011776.2 Cucumis melo
Migut.N01853 Erythranthe guttata
MSTRG.5072 Avicennia marina
Nitab4.5_0003481g0120 Nicotiana tabacum
Nitab4.5_0005808g0020 Nicotiana tabacum
Nn3g18734 Nelumbo nucifera
Oeu006789.1 Olea europaea
Oeu013089.1 Olea europaea
Oeu064128.1 Olea europaea
Os04g0541500 Oryza sativa ssp. japonica
Os08g0152700 Oryza sativa ssp. japonica
Os10g0516800 Oryza sativa ssp. japonica
Peaxi162Scf00082g00116 Petunia axillaris
PGR044G0398 Punica granatum
PGSC0003DMG400005402 Solanum tuberosum
Phvul.004G000500 Phaseolus vulgaris
Potri.008G002100 Populus trichocarpa
Potri.010G255600 Populus trichocarpa
Pp3c1_15060 Physcomitrium patens
Pp3c2_22010 Physcomitrium patens
Prupe.1G584800 Prunus persica
Psat1g052480 Pisum sativum
PSO063G7312 Papaver somniferum
PSO782G3237 Papaver somniferum
QL01p000088 Quercus lobata
QL12p027399 Quercus lobata
RcHm_v2.0_Chr4g0447291 Rosa chinensis
Rhsim02G0256600 Rhododendron simsii
Sabra10G0199000 Salix brachista
SalBow6G5617 Salvia bowleyana
Sc13g0010690 Simmondsia chinensis
Sc13g0010700 Simmondsia chinensis
Sc19g0000340 Simmondsia chinensis
Sed0005704 Sechium edule
Sed0021880 Sechium edule
SEGI_02431 Sequoiadendron giganteum
SEGI_30817 Sequoiadendron giganteum
SGA_v2.0_scaffold232G43497 Striga asiatica
SGA_v2.0_scaffold43G16290 Striga asiatica
SHI21195 Sapria himalayana
SMO239G0136 Selaginella moellendorffii
Solyc01g096500.3 Solanum lycopersicum
Sopen01g040230 Solanum pennellii
Sp2g23710 Schrenkiella parvula
Sp6g34510 Schrenkiella parvula
TAR374G0400 Trochodendron aralioides
TAR375G0344 Trochodendron aralioides
THA.LOC104800589 Tarenaya hassleriana
THA.LOC104818390 Tarenaya hassleriana
Thecc.02G151100 Theobroma cacao
Thhalv10003687m.g Eutrema salsugineum
TPR.G14805 Trifolium pratense
TPR.G25204 Trifolium pratense
TWI74G0409 Tripterygium wilfordii
TWI77G0180 Tripterygium wilfordii
unitig_61.g26366 Utricularia gibba
unitig_61.g26367 Utricularia gibba
vmacro18720 Vaccinium macrocarpon
VMungo0464G0300 Vigna mungo
Zm00001eb043540 Zea mays
Zm00001eb131920 Zea mays
Zm00001eb172780 Zea mays
Zm00001eb197100 Zea mays
Zm00001eb242540 Zea mays
Zm00001eb268710 Zea mays
Zm00001eb358590 Zea mays
Zm00001eb385760 Zea mays
Zm00001eb427640 Zea mays

User provided reference genes

Program Settings